RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 TNP1P09430 55 aa0.6□□□□□ -2.31
PPP4R3A-209ENST00000555470 LPAP08519 4548 aa0.6□□□□□ -2.31
PPP4R3A-209ENST00000555470 POLR2KP53803 58 aaKnown RBP0.59□□□□□ -2.31
PPP4R3A-209ENST00000555470 CLPSL2Q6UWE3 100 aa0.59□□□□□ -2.31
PPP4R3A-209ENST00000555470 CREBBPQ92793 2442 aa0.59□□□□□ -2.32
PPP4R3A-209ENST00000555470 CEP290O15078 2479 aa0.59□□□□□ -2.32
PPP4R3A-209ENST00000555470 MYCBP2O75592 4640 aa0.58□□□□□ -2.32
PPP4R3A-209ENST00000555470 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
PPP4R3A-209ENST00000555470 ACANP16112 2415 aa0.57□□□□□ -2.32
PPP4R3A-209ENST00000555470 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
PPP4R3A-209ENST00000555470 VPS13BQ7Z7G8 4022 aa0.56□□□□□ -2.32
PPP4R3A-209ENST00000555470 A0A0C4DFX4 3053 aa0.55□□□□□ -2.32
PPP4R3A-209ENST00000555470 RPL39P62891 51 aaKnown RBP0.55□□□□□ -2.32
PPP4R3A-209ENST00000555470 HIVEP3Q5T1R4 2406 aa0.55□□□□□ -2.32
PPP4R3A-209ENST00000555470 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
PPP4R3A-209ENST00000555470 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
PPP4R3A-209ENST00000555470 DEFB110Q30KQ9 67 aa0.54□□□□□ -2.32
PPP4R3A-209ENST00000555470 HRNRQ86YZ3 2850 aaPredicted RBP0.54□□□□□ -2.32
PPP4R3A-209ENST00000555470 CACNA1AO00555 2505 aa0.54□□□□□ -2.32
PPP4R3A-209ENST00000555470 AHNAKQ09666 5890 aaKnown RBP0.52□□□□□ -2.33
PPP4R3A-209ENST00000555470 USP24Q9UPU5 2620 aa0.51□□□□□ -2.33
PPP4R3A-209ENST00000555470 APC2O95996 2303 aa0.51□□□□□ -2.33
PPP4R3A-209ENST00000555470 SPRR2AP35326 72 aa0.51□□□□□ -2.33
PPP4R3A-209ENST00000555470 GCC2Q8IWJ2 1684 aa0.51□□□□□ -2.33
PPP4R3A-209ENST00000555470 NAV2Q8IVL1 2488 aa0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 NBASA2RRP1 2371 aa0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 WNK1Q9H4A3 2382 aa0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 NF1P21359 2839 aa0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 SRRM2Q9UQ35 2752 aaKnown RBP0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 PKD1P98161 4303 aa0.5□□□□□ -2.33
PPP4R3A-209ENST00000555470 RPL39LQ96EH5 51 aaKnown RBP0.49□□□□□ -2.33
PPP4R3A-209ENST00000555470 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
PPP4R3A-209ENST00000555470 SACSQ9NZJ4 4579 aa0.48□□□□□ -2.33
PPP4R3A-209ENST00000555470 PDZD2O15018 2839 aa0.47□□□□□ -2.33
PPP4R3A-209ENST00000555470 KRTAP6-2Q3LI66 62 aa0.47□□□□□ -2.33
PPP4R3A-209ENST00000555470 FLNBO75369 2602 aaKnown RBP0.46□□□□□ -2.34
PPP4R3A-209ENST00000555470 MT1AP04731 61 aa0.46□□□□□ -2.34
PPP4R3A-209ENST00000555470 TOMM7Q9P0U1 55 aa0.46□□□□□ -2.34
PPP4R3A-209ENST00000555470 FAT4Q6V0I7 4981 aa0.46□□□□□ -2.34
PPP4R3A-209ENST00000555470 SPTBN4Q9H254 2564 aa0.46□□□□□ -2.34
PPP4R3A-209ENST00000555470 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
PPP4R3A-209ENST00000555470 DNAH3Q8TD57 4116 aa0.45□□□□□ -2.34
PPP4R3A-209ENST00000555470 CUBNO60494 3623 aa0.45□□□□□ -2.34
PPP4R3A-209ENST00000555470 STAB1Q9NY15 2570 aa0.45□□□□□ -2.34
PPP4R3A-209ENST00000555470 IGSF10Q6WRI0 2623 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 COL7A1Q02388 2944 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 HSPG2P98160 4391 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 SPART-AS1P0CW21 52 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 FLNCQ14315 2725 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
PPP4R3A-209ENST00000555470 GCN1Q92616 2671 aaKnown RBP0.43□□□□□ -2.34
PPP4R3A-209ENST00000555470 DMXL1Q9Y485 3027 aa0.42□□□□□ -2.34
PPP4R3A-209ENST00000555470 SONP18583 2426 aaKnown RBP0.42□□□□□ -2.34
PPP4R3A-209ENST00000555470 LEAP2Q969E1 77 aa0.41□□□□□ -2.34
PPP4R3A-209ENST00000555470 ZZEF1O43149 2961 aa0.41□□□□□ -2.34
PPP4R3A-209ENST00000555470 SYNE2Q8WXH0 6885 aaKnown RBP0.41□□□□□ -2.34
PPP4R3A-209ENST00000555470 PKHD1L1Q86WI1 4243 aa0.4□□□□□ -2.34
PPP4R3A-209ENST00000555470 MTORP42345 2549 aa0.4□□□□□ -2.34
PPP4R3A-209ENST00000555470 DCHS2Q6V1P9 2916 aa0.4□□□□□ -2.35
PPP4R3A-209ENST00000555470 MACF1Q9UPN3 7388 aaKnown RBP0.4□□□□□ -2.35
PPP4R3A-209ENST00000555470 HMCN2Q8NDA2 5059 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 FSIP2Q5CZC0 6907 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 ANK3Q12955 4377 aaKnown RBP0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 TACC2O95359 2948 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 SETD2Q9BYW2 2564 aaPredicted RBP0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 PKHD1P08F94 4074 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 FLGP20930 4061 aaPredicted RBP0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 SPRR2EP22531 72 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
PPP4R3A-209ENST00000555470 MDN1Q9NU22 5596 aa0.38□□□□□ -2.35
PPP4R3A-209ENST00000555470 DNAH11Q96DT5 4516 aa0.38□□□□□ -2.35
PPP4R3A-209ENST00000555470 KRTAP8-1Q8IUC2 63 aa0.38□□□□□ -2.35
PPP4R3A-209ENST00000555470 COL6A5A8TX70 2615 aa0.37□□□□□ -2.35
PPP4R3A-209ENST00000555470 COL6A3P12111 3177 aa0.37□□□□□ -2.35
PPP4R3A-209ENST00000555470 ANKRD11Q6UB99 2663 aaPredicted RBP0.36□□□□□ -2.35
PPP4R3A-209ENST00000555470 ARHGAP5-AS1Q96IT6 56 aa0.36□□□□□ -2.35
PPP4R3A-209ENST00000555470 DMBT1Q9UGM3 2413 aaPredicted RBP0.36□□□□□ -2.35
PPP4R3A-209ENST00000555470 DNAH9Q9NYC9 4486 aa0.36□□□□□ -2.35
PPP4R3A-209ENST00000555470 LRP1BQ9NZR2 4599 aa0.35□□□□□ -2.35
PPP4R3A-209ENST00000555470 SPRR2FQ96RM1 72 aa0.35□□□□□ -2.35
PPP4R3A-209ENST00000555470 MAST4O15021 2626 aa0.34□□□□□ -2.36
PPP4R3A-209ENST00000555470 ACACAQ13085 2346 aa0.34□□□□□ -2.36
PPP4R3A-209ENST00000555470 DNAH2Q9P225 4427 aa0.34□□□□□ -2.36
PPP4R3A-209ENST00000555470 SPENQ96T58 3664 aaKnown RBP0.34□□□□□ -2.36
PPP4R3A-209ENST00000555470 RIF1Q5UIP0 2472 aaKnown RBP0.33□□□□□ -2.36
PPP4R3A-209ENST00000555470 SVEP1Q4LDE5 3571 aa0.33□□□□□ -2.36
PPP4R3A-209ENST00000555470 RANBP2P49792 3224 aaKnown RBP0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 LRRK2Q5S007 2527 aa0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 UTP20O75691 2785 aaKnown RBP0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 KMT2DO14686 5537 aa0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 FLNAP21333 2647 aaKnown RBP0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 ZANQ9Y493 2812 aa0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 LINC01590Q5TEZ4 76 aa0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 AKAP9Q99996 3911 aa0.32□□□□□ -2.36
PPP4R3A-209ENST00000555470 EPG5Q9HCE0 2579 aa0.31□□□□□ -2.36
PPP4R3A-209ENST00000555470 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
PPP4R3A-209ENST00000555470 DYNC2H1Q8NCM8 4307 aaKnown RBP0.31□□□□□ -2.36
PPP4R3A-209ENST00000555470 SPG11Q96JI7 2443 aa0.3□□□□□ -2.36
PPP4R3A-209ENST00000555470 DNAH6Q9C0G6 4158 aa0.3□□□□□ -2.36
PPP4R3A-209ENST00000555470 APOBP04114 4563 aaKnown RBP0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms