RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 NDUFC1O43677 76 aa5.89□□□□□ -1.47
PSEN1-213ENST00000555386 KRTAP1-4P0C5Y4 121 aa5.88□□□□□ -1.47
PSEN1-213ENST00000555386 MT1HL1P0DM35 61 aa5.87□□□□□ -1.47
PSEN1-213ENST00000555386 Q8N9L7 120 aa5.87□□□□□ -1.47
PSEN1-213ENST00000555386 OCR1Q9BZK8 76 aa5.86□□□□□ -1.47
PSEN1-213ENST00000555386 H7BZZ5 65 aa5.85□□□□□ -1.47
PSEN1-213ENST00000555386 DSCR10P59022 87 aa5.85□□□□□ -1.47
PSEN1-213ENST00000555386 A0A087X002 238 aa5.84□□□□□ -1.47
PSEN1-213ENST00000555386 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
PSEN1-213ENST00000555386 FAM236DA0A1B0GTK5 79 aa5.83□□□□□ -1.48
PSEN1-213ENST00000555386 FAM236CP0DP71 79 aa5.83□□□□□ -1.48
PSEN1-213ENST00000555386 ATP5EP56381 51 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-213ENST00000555386 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
PSEN1-213ENST00000555386 ZNF706Q9Y5V0 76 aaPredicted RBP5.83□□□□□ -1.48
PSEN1-213ENST00000555386 A0A087WSZ3 146 aa5.82□□□□□ -1.48
PSEN1-213ENST00000555386 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
PSEN1-213ENST00000555386 K7EQZ3 153 aa5.81□□□□□ -1.48
PSEN1-213ENST00000555386 TYMSOSQ8TAI1 123 aa5.81□□□□□ -1.48
PSEN1-213ENST00000555386 SNURFQ9Y675 71 aa5.81□□□□□ -1.48
PSEN1-213ENST00000555386 A0A0U1RQV1 116 aa5.8□□□□□ -1.48
PSEN1-213ENST00000555386 HCG22E2RYF7 251 aa5.8□□□□□ -1.48
PSEN1-213ENST00000555386 KRTAP13-2Q52LG2 175 aa5.8□□□□□ -1.48
PSEN1-213ENST00000555386 LINC00483Q53H64 154 aa5.8□□□□□ -1.48
PSEN1-213ENST00000555386 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
PSEN1-213ENST00000555386 A0A0G2JQZ4 141 aa5.78□□□□□ -1.48
PSEN1-213ENST00000555386 FAM229BQ4G0N7 80 aa5.78□□□□□ -1.48
PSEN1-213ENST00000555386 SERP1Q9Y6X1 66 aa5.78□□□□□ -1.48
PSEN1-213ENST00000555386 MOBPQ13875 183 aa5.77□□□□□ -1.49
PSEN1-213ENST00000555386 C5orf47Q569G3 176 aa5.77□□□□□ -1.49
PSEN1-213ENST00000555386 LINC00472Q9H8W2 130 aa5.77□□□□□ -1.49
PSEN1-213ENST00000555386 A8MWP4 228 aa5.76□□□□□ -1.49
PSEN1-213ENST00000555386 HMCN2Q8NDA2 5059 aa5.75□□□□□ -1.49
PSEN1-213ENST00000555386 PRR15Q8IV56 129 aa5.75□□□□□ -1.49
PSEN1-213ENST00000555386 LINC00304Q8N9R0 145 aa5.73□□□□□ -1.49
PSEN1-213ENST00000555386 DEFB116Q30KQ4 102 aa5.72□□□□□ -1.49
PSEN1-213ENST00000555386 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
PSEN1-213ENST00000555386 NDUFB1O75438 58 aa5.71□□□□□ -1.49
PSEN1-213ENST00000555386 CASC2Q6XLA1 102 aa5.71□□□□□ -1.5
PSEN1-213ENST00000555386 H3BPC8 53 aa5.7□□□□□ -1.5
PSEN1-213ENST00000555386 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
PSEN1-213ENST00000555386 WFDC13Q8IUB5 93 aa5.7□□□□□ -1.5
PSEN1-213ENST00000555386 MP68P56378 58 aa5.69□□□□□ -1.5
PSEN1-213ENST00000555386 Q96NJ1 140 aa5.68□□□□□ -1.5
PSEN1-213ENST00000555386 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
PSEN1-213ENST00000555386 SMIM26A0A096LP01 95 aa5.67□□□□□ -1.5
PSEN1-213ENST00000555386 PRR4Q16378 134 aa5.67□□□□□ -1.5
PSEN1-213ENST00000555386 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
PSEN1-213ENST00000555386 MMP24-AS1A0A0U1RRL7 71 aa5.66□□□□□ -1.5
PSEN1-213ENST00000555386 LPAP08519 4548 aa5.66□□□□□ -1.5
PSEN1-213ENST00000555386 CD164Q04900 197 aa5.65□□□□□ -1.5
PSEN1-213ENST00000555386 ASB16-AS1Q495Z4 193 aa5.65□□□□□ -1.5
PSEN1-213ENST00000555386 SPAG11AQ6PDA7 123 aa5.65□□□□□ -1.5
PSEN1-213ENST00000555386 LRP2P98164 4655 aa5.65□□□□□ -1.51
PSEN1-213ENST00000555386 Q5XG85 94 aa5.64□□□□□ -1.51
PSEN1-213ENST00000555386 hDV103S1A0JD37 113 aa5.64□□□□□ -1.51
PSEN1-213ENST00000555386 TP53AIP1Q9HCN2 124 aa5.64□□□□□ -1.51
PSEN1-213ENST00000555386 TRAV22A0A0B4J277 110 aa5.63□□□□□ -1.51
PSEN1-213ENST00000555386 A0A1B0GVX0 72 aa5.63□□□□□ -1.51
PSEN1-213ENST00000555386 H0Y9P7 68 aa5.63□□□□□ -1.51
PSEN1-213ENST00000555386 SPINK1P00995 79 aa5.63□□□□□ -1.51
PSEN1-213ENST00000555386 CYP4F30PQ9H0H9 118 aa5.63□□□□□ -1.51
PSEN1-213ENST00000555386 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
PSEN1-213ENST00000555386 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
PSEN1-213ENST00000555386 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
PSEN1-213ENST00000555386 LINC00208Q96KT6 92 aa5.61□□□□□ -1.51
PSEN1-213ENST00000555386 FP248Q71RG6 208 aaPredicted RBP5.58□□□□□ -1.52
PSEN1-213ENST00000555386 C4orf26Q17RF5 130 aa5.58□□□□□ -1.52
PSEN1-213ENST00000555386 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
PSEN1-213ENST00000555386 IGLV7-46A0A075B6I9 117 aa5.57□□□□□ -1.52
PSEN1-213ENST00000555386 IGHV6-1A0A0B4J1U7 121 aa5.57□□□□□ -1.52
PSEN1-213ENST00000555386 MRPL34Q9BQ48 92 aaKnown RBP5.57□□□□□ -1.52
PSEN1-213ENST00000555386 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
PSEN1-213ENST00000555386 C8orf87E5RJ46 101 aa5.54□□□□□ -1.52
PSEN1-213ENST00000555386 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
PSEN1-213ENST00000555386 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
PSEN1-213ENST00000555386 NDUFS5O43920 106 aa5.51□□□□□ -1.53
PSEN1-213ENST00000555386 Q1T7F1 81 aa5.5□□□□□ -1.53
PSEN1-213ENST00000555386 C1orf195Q5TG92 126 aa5.49□□□□□ -1.53
PSEN1-213ENST00000555386 A0A0A0MQY5 61 aa5.48□□□□□ -1.53
PSEN1-213ENST00000555386 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
PSEN1-213ENST00000555386 NOTCH2NLQ7Z3S9 236 aa5.48□□□□□ -1.53
PSEN1-213ENST00000555386 V9GYY9 64 aa5.48□□□□□ -1.53
PSEN1-213ENST00000555386 RNF213Q63HN8 5207 aa5.48□□□□□ -1.53
PSEN1-213ENST00000555386 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
PSEN1-213ENST00000555386 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
PSEN1-213ENST00000555386 TPRXLQ17RH7 258 aa5.46□□□□□ -1.53
PSEN1-213ENST00000555386 MPLKIPQ8TAP9 179 aa5.46□□□□□ -1.53
PSEN1-213ENST00000555386 LINC00313P59037 77 aa5.45□□□□□ -1.54
PSEN1-213ENST00000555386 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
PSEN1-213ENST00000555386 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
PSEN1-213ENST00000555386 Q8N9P0 234 aaPredicted RBP5.43□□□□□ -1.54
PSEN1-213ENST00000555386 COA5Q86WW8 74 aa5.41□□□□□ -1.54
PSEN1-213ENST00000555386 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
PSEN1-213ENST00000555386 MUC17Q685J3 4493 aa5.41□□□□□ -1.54
PSEN1-213ENST00000555386 Q5W150 140 aa5.4□□□□□ -1.54
PSEN1-213ENST00000555386 XP32Q5T750 250 aa5.39□□□□□ -1.55
PSEN1-213ENST00000555386 KRTAP16-1A8MUX0 517 aa5.38□□□□□ -1.55
PSEN1-213ENST00000555386 MUC2Q02817 5179 aa5.37□□□□□ -1.55
PSEN1-213ENST00000555386 IGKV2-30P06310 120 aa5.34□□□□□ -1.55
PSEN1-213ENST00000555386 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms