RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 A0A0U1RQV1 116 aa8.43□□□□□ -1.06
IFT43-209ENST00000555305 C8orf87E5RJ46 101 aa8.42□□□□□ -1.06
IFT43-209ENST00000555305 MP68P56378 58 aa8.42□□□□□ -1.06
IFT43-209ENST00000555305 H3BPC8 53 aa8.41□□□□□ -1.06
IFT43-209ENST00000555305 FAM229AH3BQW9 127 aa8.4□□□□□ -1.06
IFT43-209ENST00000555305 OXTP01178 125 aa8.4□□□□□ -1.06
IFT43-209ENST00000555305 KRTAP10-4P60372 401 aaPredicted RBP8.4□□□□□ -1.07
IFT43-209ENST00000555305 SNURFQ9Y675 71 aa8.4□□□□□ -1.07
IFT43-209ENST00000555305 PKHD1P08F94 4074 aa8.4□□□□□ -1.07
IFT43-209ENST00000555305 H7BZZ5 65 aa8.39□□□□□ -1.07
IFT43-209ENST00000555305 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
IFT43-209ENST00000555305 LINC00304Q8N9R0 145 aa8.38□□□□□ -1.07
IFT43-209ENST00000555305 ATP5EP56381 51 aaPredicted RBP8.37□□□□□ -1.07
IFT43-209ENST00000555305 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
IFT43-209ENST00000555305 MRPL34Q9BQ48 92 aaKnown RBP8.37□□□□□ -1.07
IFT43-209ENST00000555305 FAM236DA0A1B0GTK5 79 aa8.35□□□□□ -1.07
IFT43-209ENST00000555305 FAM236CP0DP71 79 aa8.35□□□□□ -1.07
IFT43-209ENST00000555305 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
IFT43-209ENST00000555305 SERP1Q9Y6X1 66 aa8.35□□□□□ -1.07
IFT43-209ENST00000555305 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
IFT43-209ENST00000555305 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
IFT43-209ENST00000555305 TRAV22A0A0B4J277 110 aa8.33□□□□□ -1.08
IFT43-209ENST00000555305 ZCCHC13Q8WW36 166 aaKnown RBP8.33□□□□□ -1.08
IFT43-209ENST00000555305 C4orf26Q17RF5 130 aa8.32□□□□□ -1.08
IFT43-209ENST00000555305 H0Y9P7 68 aa8.31□□□□□ -1.08
IFT43-209ENST00000555305 LINC00313P59037 77 aa8.31□□□□□ -1.08
IFT43-209ENST00000555305 NDUFS5O43920 106 aa8.3□□□□□ -1.08
IFT43-209ENST00000555305 LINC00208Q96KT6 92 aa8.27□□□□□ -1.08
IFT43-209ENST00000555305 NOTCH2NLQ7Z3S9 236 aa8.26□□□□□ -1.09
IFT43-209ENST00000555305 APOBP04114 4563 aaKnown RBP8.26□□□□□ -1.09
IFT43-209ENST00000555305 Q5VSD8 79 aa8.25□□□□□ -1.09
IFT43-209ENST00000555305 C1orf64Q8NEQ6 169 aa8.25□□□□□ -1.09
IFT43-209ENST00000555305 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
IFT43-209ENST00000555305 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
IFT43-209ENST00000555305 Q8N9P0 234 aaPredicted RBP8.22□□□□□ -1.09
IFT43-209ENST00000555305 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
IFT43-209ENST00000555305 LOC101927531A0A1B0GV80 90 aa8.18□□□□□ -1.1
IFT43-209ENST00000555305 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
IFT43-209ENST00000555305 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.11
IFT43-209ENST00000555305 Q8N1X5 172 aa8.14□□□□□ -1.11
IFT43-209ENST00000555305 CYP4F30PQ9H0H9 118 aa8.14□□□□□ -1.11
IFT43-209ENST00000555305 RYR3Q15413 4870 aa8.13□□□□□ -1.11
IFT43-209ENST00000555305 KRTAP10-8P60410 259 aa8.12□□□□□ -1.11
IFT43-209ENST00000555305 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
IFT43-209ENST00000555305 FAT1Q14517 4588 aa8.1□□□□□ -1.11
IFT43-209ENST00000555305 Q5W150 140 aa8.09□□□□□ -1.11
IFT43-209ENST00000555305 IGLV7-46A0A075B6I9 117 aa8.07□□□□□ -1.12
IFT43-209ENST00000555305 PKHD1L1Q86WI1 4243 aa8.06□□□□□ -1.12
IFT43-209ENST00000555305 PCOTHQ58A44 107 aa8.03□□□□□ -1.12
IFT43-209ENST00000555305 RYR1P21817 5038 aa8.03□□□□□ -1.12
IFT43-209ENST00000555305 HSPG2P98160 4391 aa8.02□□□□□ -1.13
IFT43-209ENST00000555305 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
IFT43-209ENST00000555305 IGKV2-30P06310 120 aa8.01□□□□□ -1.13
IFT43-209ENST00000555305 A8MUU9 505 aa7.99□□□□□ -1.13
IFT43-209ENST00000555305 PRR4Q16378 134 aa7.99□□□□□ -1.13
IFT43-209ENST00000555305 RETNLBQ9BQ08 111 aa7.97□□□□□ -1.13
IFT43-209ENST00000555305 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
IFT43-209ENST00000555305 BRK1Q8WUW1 75 aa7.94□□□□□ -1.14
IFT43-209ENST00000555305 C7orf65Q6ZTY9 151 aa7.93□□□□□ -1.14
IFT43-209ENST00000555305 Q75L30 129 aa7.93□□□□□ -1.14
IFT43-209ENST00000555305 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
IFT43-209ENST00000555305 KRTAP17-1Q9BYP8 105 aa7.92□□□□□ -1.14
IFT43-209ENST00000555305 MT1HL1P0DM35 61 aa7.92□□□□□ -1.14
IFT43-209ENST00000555305 HRES1P13985 223 aa7.91□□□□□ -1.14
IFT43-209ENST00000555305 Q1T7F1 81 aa7.91□□□□□ -1.14
IFT43-209ENST00000555305 IGKV2D-30A0A075B6S6 120 aa7.9□□□□□ -1.14
IFT43-209ENST00000555305 MPLKIPQ8TAP9 179 aa7.89□□□□□ -1.15
IFT43-209ENST00000555305 ACYP2P14621 99 aa7.88□□□□□ -1.15
IFT43-209ENST00000555305 COA5Q86WW8 74 aa7.88□□□□□ -1.15
IFT43-209ENST00000555305 DMAC1Q96GE9 116 aa7.87□□□□□ -1.15
IFT43-209ENST00000555305 V9GYY9 64 aa7.87□□□□□ -1.15
IFT43-209ENST00000555305 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
IFT43-209ENST00000555305 TNXBP22105 4242 aa7.86□□□□□ -1.15
IFT43-209ENST00000555305 EPPK1P58107 5090 aaKnown RBP7.84□□□□□ -1.15
IFT43-209ENST00000555305 ATP11AUNQ6ZP68 121 aa7.82□□□□□ -1.16
IFT43-209ENST00000555305 A8MUN3 132 aa7.81□□□□□ -1.16
IFT43-209ENST00000555305 LRP1Q07954 4544 aaKnown RBP7.79□□□□□ -1.16
IFT43-209ENST00000555305 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
IFT43-209ENST00000555305 FAT3Q8TDW7 4589 aa7.78□□□□□ -1.16
IFT43-209ENST00000555305 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
IFT43-209ENST00000555305 XP32Q5T750 250 aa7.76□□□□□ -1.17
IFT43-209ENST00000555305 SPINK7P58062 85 aa7.75□□□□□ -1.17
IFT43-209ENST00000555305 SEC61GP60059 68 aa7.75□□□□□ -1.17
IFT43-209ENST00000555305 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
IFT43-209ENST00000555305 DMBT1Q9UGM3 2413 aaPredicted RBP7.73□□□□□ -1.17
IFT43-209ENST00000555305 PMAIP1Q13794 54 aa7.72□□□□□ -1.17
IFT43-209ENST00000555305 KRTAP4-5Q9BYR2 181 aa7.72□□□□□ -1.17
IFT43-209ENST00000555305 J3QL48 77 aa7.67□□□□□ -1.18
IFT43-209ENST00000555305 MYCBP2O75592 4640 aa7.66□□□□□ -1.18
IFT43-209ENST00000555305 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
IFT43-209ENST00000555305 PSPHP1O15172 72 aa7.64□□□□□ -1.19
IFT43-209ENST00000555305 SPTSSBQ8NFR3 76 aa7.64□□□□□ -1.19
IFT43-209ENST00000555305 Q5VV11 94 aa7.63□□□□□ -1.19
IFT43-209ENST00000555305 BIRC6Q9NR09 4857 aa7.62□□□□□ -1.19
IFT43-209ENST00000555305 COX6B2Q6YFQ2 88 aa7.61□□□□□ -1.19
IFT43-209ENST00000555305 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
IFT43-209ENST00000555305 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
IFT43-209ENST00000555305 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
IFT43-209ENST00000555305 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
IFT43-209ENST00000555305 HERC2O95714 4834 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms