RNA–Protein interactions for RNA: ENST00000555231.5

XRCC3-212, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-212ENST00000555231 VPS25Q9BRG1 176 aa6.18□□□□□ -1.42
XRCC3-212ENST00000555231 HIGD1BQ9P298 99 aa6.18□□□□□ -1.42
XRCC3-212ENST00000555231 NEBP20929 6669 aa6.18□□□□□ -1.42
XRCC3-212ENST00000555231 C2orf91Q6ZV80 131 aa6.17□□□□□ -1.42
XRCC3-212ENST00000555231 CEND1Q8N111 149 aa6.16□□□□□ -1.42
XRCC3-212ENST00000555231 TMEM256-PLSCR3K7ERE1 68 aa6.14□□□□□ -1.43
XRCC3-212ENST00000555231 FXYD2P54710 66 aa6.14□□□□□ -1.43
XRCC3-212ENST00000555231 H3BQ85 93 aa6.13□□□□□ -1.43
XRCC3-212ENST00000555231 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
XRCC3-212ENST00000555231 LYRM7Q5U5X0 104 aa6.13□□□□□ -1.43
XRCC3-212ENST00000555231 PAM16Q9Y3D7 125 aa6.13□□□□□ -1.43
XRCC3-212ENST00000555231 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
XRCC3-212ENST00000555231 TMEM238LA0A1B0GVL6 79 aa6.12□□□□□ -1.43
XRCC3-212ENST00000555231 A6NJY4 79 aa6.12□□□□□ -1.43
XRCC3-212ENST00000555231 S100A6P06703 90 aa6.12□□□□□ -1.43
XRCC3-212ENST00000555231 PSMB2P49721 201 aa6.11□□□□□ -1.43
XRCC3-212ENST00000555231 J3KT08 172 aa6.1□□□□□ -1.43
XRCC3-212ENST00000555231 UBE2V1Q13404 147 aa6.1□□□□□ -1.43
XRCC3-212ENST00000555231 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.43
XRCC3-212ENST00000555231 NDUFB1O75438 58 aa6.08□□□□□ -1.44
XRCC3-212ENST00000555231 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
XRCC3-212ENST00000555231 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
XRCC3-212ENST00000555231 K7ERJ3 54 aa6.07□□□□□ -1.44
XRCC3-212ENST00000555231 RBM3P98179 157 aaKnown RBP6.07□□□□□ -1.44
XRCC3-212ENST00000555231 KRTAP20-1Q3LI63 56 aa6.06□□□□□ -1.44
XRCC3-212ENST00000555231 DSCR8Q96T75 97 aa6.06□□□□□ -1.44
XRCC3-212ENST00000555231 COX6CP09669 75 aa6.05□□□□□ -1.44
XRCC3-212ENST00000555231 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
XRCC3-212ENST00000555231 IGKV3D-7A0A0C4DH55 119 aa6.04□□□□□ -1.44
XRCC3-212ENST00000555231 Q6ZQT0 140 aa6.04□□□□□ -1.44
XRCC3-212ENST00000555231 A6NN06 94 aa6.03□□□□□ -1.44
XRCC3-212ENST00000555231 Q6ZVQ6 151 aa6.02□□□□□ -1.45
XRCC3-212ENST00000555231 C9JAW5 83 aa6.01□□□□□ -1.45
XRCC3-212ENST00000555231 S100A1P23297 94 aa6□□□□□ -1.45
XRCC3-212ENST00000555231 C21orf62-AS1Q17RA5 79 aa6□□□□□ -1.45
XRCC3-212ENST00000555231 MT1BP07438 61 aa5.98□□□□□ -1.45
XRCC3-212ENST00000555231 HSD52Q0P140 79 aa5.98□□□□□ -1.45
XRCC3-212ENST00000555231 BAALC-AS2P0C853 105 aa5.96□□□□□ -1.46
XRCC3-212ENST00000555231 SCGB1C2P0DMR2 95 aa5.96□□□□□ -1.46
XRCC3-212ENST00000555231 MRPL34Q9BQ48 92 aaKnown RBP5.96□□□□□ -1.46
XRCC3-212ENST00000555231 IGKV2D-30A0A075B6S6 120 aa5.95□□□□□ -1.46
XRCC3-212ENST00000555231 IGKV2-30P06310 120 aa5.95□□□□□ -1.46
XRCC3-212ENST00000555231 MMP24-AS1A0A0U1RRL7 71 aa5.94□□□□□ -1.46
XRCC3-212ENST00000555231 PRR15Q8IV56 129 aa5.94□□□□□ -1.46
XRCC3-212ENST00000555231 TMEM254Q8TBM7 123 aa5.94□□□□□ -1.46
XRCC3-212ENST00000555231 FAM236AA0A1B0GUQ0 79 aa5.93□□□□□ -1.46
XRCC3-212ENST00000555231 FAM236BA0A1B0GV22 79 aa5.93□□□□□ -1.46
XRCC3-212ENST00000555231 NDUFS5O43920 106 aa5.93□□□□□ -1.46
XRCC3-212ENST00000555231 Q5VV11 94 aa5.93□□□□□ -1.46
XRCC3-212ENST00000555231 KRTAP5-9P26371 169 aa5.9□□□□□ -1.46
XRCC3-212ENST00000555231 C5orf47Q569G3 176 aa5.9□□□□□ -1.46
XRCC3-212ENST00000555231 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
XRCC3-212ENST00000555231 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
XRCC3-212ENST00000555231 Q5W150 140 aa5.89□□□□□ -1.47
XRCC3-212ENST00000555231 C7orf65Q6ZTY9 151 aa5.89□□□□□ -1.47
XRCC3-212ENST00000555231 hDV103S1A0JD37 113 aa5.88□□□□□ -1.47
XRCC3-212ENST00000555231 C4orf26Q17RF5 130 aa5.88□□□□□ -1.47
XRCC3-212ENST00000555231 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
XRCC3-212ENST00000555231 A0A1B0GW54 56 aa5.87□□□□□ -1.47
XRCC3-212ENST00000555231 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
XRCC3-212ENST00000555231 KMT2DO14686 5537 aa5.87□□□□□ -1.47
XRCC3-212ENST00000555231 NREPQ16612 68 aa5.86□□□□□ -1.47
XRCC3-212ENST00000555231 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
XRCC3-212ENST00000555231 K7EQZ3 153 aa5.85□□□□□ -1.47
XRCC3-212ENST00000555231 SPRR2GQ9BYE4 73 aa5.85□□□□□ -1.47
XRCC3-212ENST00000555231 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
XRCC3-212ENST00000555231 PDE6GP18545 87 aa5.82□□□□□ -1.48
XRCC3-212ENST00000555231 PYY3Q5JQD4 70 aa5.82□□□□□ -1.48
XRCC3-212ENST00000555231 ATXN8Q156A1 80 aa5.81□□□□□ -1.48
XRCC3-212ENST00000555231 NAA38Q9BRA0 125 aaKnown RBP5.8□□□□□ -1.48
XRCC3-212ENST00000555231 UQCR10Q9UDW1 63 aa5.8□□□□□ -1.48
XRCC3-212ENST00000555231 KRTAP2-3P0C7H8 128 aa5.79□□□□□ -1.48
XRCC3-212ENST00000555231 KRTAP2-4Q9BYR9 128 aa5.79□□□□□ -1.48
XRCC3-212ENST00000555231 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
XRCC3-212ENST00000555231 S4R3F8 94 aa5.78□□□□□ -1.48
XRCC3-212ENST00000555231 HCG22E2RYF7 251 aa5.77□□□□□ -1.49
XRCC3-212ENST00000555231 CSAG1Q6PB30 78 aa5.77□□□□□ -1.49
XRCC3-212ENST00000555231 LCA10Q71F78 164 aa5.75□□□□□ -1.49
XRCC3-212ENST00000555231 IMUPQ9GZP8 106 aa5.75□□□□□ -1.49
XRCC3-212ENST00000555231 KLKP1Q107X0 134 aa5.74□□□□□ -1.49
XRCC3-212ENST00000555231 Q8N9L7 120 aa5.73□□□□□ -1.49
XRCC3-212ENST00000555231 BPY2O14599 106 aa5.72□□□□□ -1.49
XRCC3-212ENST00000555231 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
XRCC3-212ENST00000555231 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
XRCC3-212ENST00000555231 SPRR2EP22531 72 aa5.68□□□□□ -1.5
XRCC3-212ENST00000555231 SPRR2BP35325 72 aa5.68□□□□□ -1.5
XRCC3-212ENST00000555231 SPRR2AP35326 72 aa5.68□□□□□ -1.5
XRCC3-212ENST00000555231 CXCL6P80162 114 aa5.68□□□□□ -1.5
XRCC3-212ENST00000555231 SPRR2FQ96RM1 72 aa5.68□□□□□ -1.5
XRCC3-212ENST00000555231 M0R143 59 aa5.61□□□□□ -1.51
XRCC3-212ENST00000555231 CRIPTQ9P021 101 aa5.6□□□□□ -1.51
XRCC3-212ENST00000555231 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
XRCC3-212ENST00000555231 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
XRCC3-212ENST00000555231 A0A087WVE0 104 aa5.57□□□□□ -1.52
XRCC3-212ENST00000555231 TSTD3H0UI37 97 aa5.57□□□□□ -1.52
XRCC3-212ENST00000555231 H3BT86 120 aa5.57□□□□□ -1.52
XRCC3-212ENST00000555231 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
XRCC3-212ENST00000555231 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
XRCC3-212ENST00000555231 TMA7Q9Y2S6 64 aaKnown RBP5.53□□□□□ -1.52
XRCC3-212ENST00000555231 MT1XP80297 61 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms