RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 KRTAP10-8P60410 259 aa6.71□□□□□ -1.34
SHMT2-216ENST00000554975 H7BZZ5 65 aa6.7□□□□□ -1.34
SHMT2-216ENST00000554975 DSCR10P59022 87 aa6.7□□□□□ -1.34
SHMT2-216ENST00000554975 LINC00483Q53H64 154 aa6.7□□□□□ -1.34
SHMT2-216ENST00000554975 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
SHMT2-216ENST00000554975 K7EQZ3 153 aa6.68□□□□□ -1.34
SHMT2-216ENST00000554975 KRTAP11-1Q8IUC1 163 aa6.68□□□□□ -1.34
SHMT2-216ENST00000554975 SERP1Q9Y6X1 66 aa6.67□□□□□ -1.34
SHMT2-216ENST00000554975 A0A0U1RQV1 116 aa6.66□□□□□ -1.34
SHMT2-216ENST00000554975 NDUFB1O75438 58 aa6.66□□□□□ -1.34
SHMT2-216ENST00000554975 A8MWP4 228 aa6.65□□□□□ -1.34
SHMT2-216ENST00000554975 C5orf47Q569G3 176 aa6.65□□□□□ -1.34
SHMT2-216ENST00000554975 LCE2AQ5TA79 106 aaPredicted RBP6.65□□□□□ -1.34
SHMT2-216ENST00000554975 SNURFQ9Y675 71 aa6.65□□□□□ -1.34
SHMT2-216ENST00000554975 ZNF861PO60384 105 aa6.64□□□□□ -1.35
SHMT2-216ENST00000554975 H3BPC8 53 aa6.63□□□□□ -1.35
SHMT2-216ENST00000554975 PRR15Q8IV56 129 aa6.63□□□□□ -1.35
SHMT2-216ENST00000554975 PSORS1C2Q9UIG4 136 aa6.63□□□□□ -1.35
SHMT2-216ENST00000554975 MP68P56378 58 aa6.62□□□□□ -1.35
SHMT2-216ENST00000554975 MOBPQ13875 183 aa6.62□□□□□ -1.35
SHMT2-216ENST00000554975 LINC00472Q9H8W2 130 aa6.62□□□□□ -1.35
SHMT2-216ENST00000554975 CASC2Q6XLA1 102 aa6.6□□□□□ -1.35
SHMT2-216ENST00000554975 IGLV9-49A0A0B4J1Y8 123 aa6.59□□□□□ -1.35
SHMT2-216ENST00000554975 SPINK6Q6UWN8 80 aa6.59□□□□□ -1.35
SHMT2-216ENST00000554975 IGLV7-43P04211 117 aa6.58□□□□□ -1.36
SHMT2-216ENST00000554975 CD164Q04900 197 aa6.58□□□□□ -1.36
SHMT2-216ENST00000554975 WFDC13Q8IUB5 93 aa6.58□□□□□ -1.36
SHMT2-216ENST00000554975 A0A0G2JQZ4 141 aa6.57□□□□□ -1.36
SHMT2-216ENST00000554975 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
SHMT2-216ENST00000554975 TP53AIP1Q9HCN2 124 aa6.55□□□□□ -1.36
SHMT2-216ENST00000554975 SMIM26A0A096LP01 95 aa6.54□□□□□ -1.36
SHMT2-216ENST00000554975 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
SHMT2-216ENST00000554975 hDV103S1A0JD37 113 aa6.53□□□□□ -1.36
SHMT2-216ENST00000554975 DEFB116Q30KQ4 102 aa6.53□□□□□ -1.36
SHMT2-216ENST00000554975 SSBP3-AS1Q7Z2R9 100 aa6.53□□□□□ -1.36
SHMT2-216ENST00000554975 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
SHMT2-216ENST00000554975 A0A1B0GVX0 72 aa6.51□□□□□ -1.37
SHMT2-216ENST00000554975 H0Y9P7 68 aa6.51□□□□□ -1.37
SHMT2-216ENST00000554975 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
SHMT2-216ENST00000554975 ASB16-AS1Q495Z4 193 aa6.5□□□□□ -1.37
SHMT2-216ENST00000554975 Q96NJ1 140 aa6.5□□□□□ -1.37
SHMT2-216ENST00000554975 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
SHMT2-216ENST00000554975 SPANXA2-OT1Q8N9U9 137 aa6.49□□□□□ -1.37
SHMT2-216ENST00000554975 CYP4F30PQ9H0H9 118 aa6.49□□□□□ -1.37
SHMT2-216ENST00000554975 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
SHMT2-216ENST00000554975 PRR26Q8N8Z3 221 aa6.47□□□□□ -1.37
SHMT2-216ENST00000554975 SVIPQ8NHG7 77 aa6.47□□□□□ -1.37
SHMT2-216ENST00000554975 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
SHMT2-216ENST00000554975 PRR4Q16378 134 aa6.45□□□□□ -1.38
SHMT2-216ENST00000554975 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
SHMT2-216ENST00000554975 MRPL34Q9BQ48 92 aaKnown RBP6.45□□□□□ -1.38
SHMT2-216ENST00000554975 LIMD2Q9BT23 127 aa6.45□□□□□ -1.38
SHMT2-216ENST00000554975 Q5XG85 94 aa6.44□□□□□ -1.38
SHMT2-216ENST00000554975 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
SHMT2-216ENST00000554975 CRCT1Q9UGL9 99 aa6.43□□□□□ -1.38
SHMT2-216ENST00000554975 C1orf64Q8NEQ6 169 aa6.42□□□□□ -1.38
SHMT2-216ENST00000554975 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
SHMT2-216ENST00000554975 KRTAP1-4P0C5Y4 121 aa6.4□□□□□ -1.38
SHMT2-216ENST00000554975 MUC17Q685J3 4493 aa6.4□□□□□ -1.39
SHMT2-216ENST00000554975 NDUFS5O43920 106 aa6.39□□□□□ -1.39
SHMT2-216ENST00000554975 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
SHMT2-216ENST00000554975 ANAPC11Q9NYG5 84 aa6.38□□□□□ -1.39
SHMT2-216ENST00000554975 V9GYY9 64 aa6.38□□□□□ -1.39
SHMT2-216ENST00000554975 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
SHMT2-216ENST00000554975 FP248Q71RG6 208 aaPredicted RBP6.35□□□□□ -1.39
SHMT2-216ENST00000554975 RPS29P62273 56 aaKnown RBP6.34□□□□□ -1.39
SHMT2-216ENST00000554975 C4orf48Q5BLP8 95 aa6.34□□□□□ -1.39
SHMT2-216ENST00000554975 A0A087X002 238 aa6.33□□□□□ -1.4
SHMT2-216ENST00000554975 C4orf26Q17RF5 130 aa6.33□□□□□ -1.4
SHMT2-216ENST00000554975 C1orf195Q5TG92 126 aa6.33□□□□□ -1.4
SHMT2-216ENST00000554975 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
SHMT2-216ENST00000554975 IGLV7-46A0A075B6I9 117 aa6.32□□□□□ -1.4
SHMT2-216ENST00000554975 SPINK1P00995 79 aa6.31□□□□□ -1.4
SHMT2-216ENST00000554975 Q1T7F1 81 aa6.31□□□□□ -1.4
SHMT2-216ENST00000554975 KRTAP13-2Q52LG2 175 aa6.31□□□□□ -1.4
SHMT2-216ENST00000554975 SPAG11AQ6PDA7 123 aa6.3□□□□□ -1.4
SHMT2-216ENST00000554975 LINC00313P59037 77 aa6.29□□□□□ -1.4
SHMT2-216ENST00000554975 Q8N9P0 234 aaPredicted RBP6.26□□□□□ -1.41
SHMT2-216ENST00000554975 LINC00304Q8N9R0 145 aa6.26□□□□□ -1.41
SHMT2-216ENST00000554975 MPLKIPQ8TAP9 179 aa6.26□□□□□ -1.41
SHMT2-216ENST00000554975 PCOTHQ58A44 107 aa6.25□□□□□ -1.41
SHMT2-216ENST00000554975 COA5Q86WW8 74 aa6.24□□□□□ -1.41
SHMT2-216ENST00000554975 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
SHMT2-216ENST00000554975 NOTCH2NLQ7Z3S9 236 aa6.23□□□□□ -1.41
SHMT2-216ENST00000554975 RETNLBQ9BQ08 111 aa6.23□□□□□ -1.41
SHMT2-216ENST00000554975 PRO0628Q9UI54 55 aa6.22□□□□□ -1.41
SHMT2-216ENST00000554975 KRTAP16-1A8MUX0 517 aa6.18□□□□□ -1.42
SHMT2-216ENST00000554975 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
SHMT2-216ENST00000554975 Q5W150 140 aa6.18□□□□□ -1.42
SHMT2-216ENST00000554975 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
SHMT2-216ENST00000554975 TPRXLQ17RH7 258 aa6.17□□□□□ -1.42
SHMT2-216ENST00000554975 ACYP2P14621 99 aa6.16□□□□□ -1.42
SHMT2-216ENST00000554975 BRK1Q8WUW1 75 aa6.15□□□□□ -1.42
SHMT2-216ENST00000554975 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
SHMT2-216ENST00000554975 HRES1P13985 223 aa6.11□□□□□ -1.43
SHMT2-216ENST00000554975 CHKB-CPT1BH3BT56 60 aa6.1□□□□□ -1.43
SHMT2-216ENST00000554975 PSPHP1O15172 72 aa6.1□□□□□ -1.43
SHMT2-216ENST00000554975 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
SHMT2-216ENST00000554975 PRR15LQ9BU68 103 aa6.1□□□□□ -1.43
SHMT2-216ENST00000554975 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms