RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TMEM256-PLSCR3K7ERE1 68 aa3.36□□□□□ -1.87
ATXN3-230ENST00000554673 RPL37AP61513 92 aaKnown RBP3.36□□□□□ -1.87
ATXN3-230ENST00000554673 MYCBP2O75592 4640 aa3.36□□□□□ -1.87
ATXN3-230ENST00000554673 FAM240AA0A1B0GVK7 77 aa3.35□□□□□ -1.87
ATXN3-230ENST00000554673 DNAL4O96015 105 aa3.35□□□□□ -1.87
ATXN3-230ENST00000554673 ABCA13Q86UQ4 5058 aa3.35□□□□□ -1.87
ATXN3-230ENST00000554673 Q5VSD8 79 aa3.34□□□□□ -1.87
ATXN3-230ENST00000554673 LAMTOR3Q9UHA4 124 aa3.34□□□□□ -1.87
ATXN3-230ENST00000554673 KRTAP10-8P60410 259 aa3.33□□□□□ -1.88
ATXN3-230ENST00000554673 RBM3P98179 157 aaKnown RBP3.33□□□□□ -1.88
ATXN3-230ENST00000554673 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
ATXN3-230ENST00000554673 CRYGAP11844 174 aa3.32□□□□□ -1.88
ATXN3-230ENST00000554673 DSCR10P59022 87 aa3.32□□□□□ -1.88
ATXN3-230ENST00000554673 Q8N9L7 120 aa3.32□□□□□ -1.88
ATXN3-230ENST00000554673 LINC00472Q9H8W2 130 aa3.32□□□□□ -1.88
ATXN3-230ENST00000554673 JMJD7-PLA2G4BH0Y9G9 81 aa3.31□□□□□ -1.88
ATXN3-230ENST00000554673 Q6Q795 121 aa3.31□□□□□ -1.88
ATXN3-230ENST00000554673 SPINK6Q6UWN8 80 aa3.31□□□□□ -1.88
ATXN3-230ENST00000554673 HRCT1Q6UXD1 115 aa3.31□□□□□ -1.88
ATXN3-230ENST00000554673 SIGMAR1Q99720 223 aa3.31□□□□□ -1.88
ATXN3-230ENST00000554673 IGKV3D-7A0A0C4DH55 119 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 TRBV7-7A0A0K0K1E9 115 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 BPY2O14599 106 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 DEFB116Q30KQ4 102 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 FAM229BQ4G0N7 80 aa3.3□□□□□ -1.88
ATXN3-230ENST00000554673 A0A087WSZ3 146 aa3.29□□□□□ -1.88
ATXN3-230ENST00000554673 A0A087WVE0 104 aa3.29□□□□□ -1.88
ATXN3-230ENST00000554673 K7ERU9 68 aa3.29□□□□□ -1.88
ATXN3-230ENST00000554673 Q6JHZ5 121 aa3.29□□□□□ -1.88
ATXN3-230ENST00000554673 VPS25Q9BRG1 176 aa3.29□□□□□ -1.88
ATXN3-230ENST00000554673 IGKV4-1P06312 121 aa3.28□□□□□ -1.88
ATXN3-230ENST00000554673 HIST1H4AP62805 103 aaKnown RBP3.27□□□□□ -1.89
ATXN3-230ENST00000554673 C9orf153Q5TBE3 101 aa3.27□□□□□ -1.89
ATXN3-230ENST00000554673 DSCR8Q96T75 97 aa3.27□□□□□ -1.89
ATXN3-230ENST00000554673 SMIM26A0A096LP01 95 aa3.26□□□□□ -1.89
ATXN3-230ENST00000554673 H3BQ85 93 aa3.26□□□□□ -1.89
ATXN3-230ENST00000554673 PSPHP1O15172 72 aa3.26□□□□□ -1.89
ATXN3-230ENST00000554673 C4orf26Q17RF5 130 aa3.26□□□□□ -1.89
ATXN3-230ENST00000554673 C1orf195Q5TG92 126 aa3.26□□□□□ -1.89
ATXN3-230ENST00000554673 ZNF706Q9Y5V0 76 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-230ENST00000554673 KRTAP16-1A8MUX0 517 aa3.25□□□□□ -1.89
ATXN3-230ENST00000554673 K7EQZ3 153 aa3.25□□□□□ -1.89
ATXN3-230ENST00000554673 ASB16-AS1Q495Z4 193 aa3.25□□□□□ -1.89
ATXN3-230ENST00000554673 SSBP3-AS1Q7Z2R9 100 aa3.25□□□□□ -1.89
ATXN3-230ENST00000554673 LINC00643Q86TS7 51 aa3.25□□□□□ -1.89
ATXN3-230ENST00000554673 DMBT1Q9UGM3 2413 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-230ENST00000554673 ACYP1P07311 99 aa3.24□□□□□ -1.89
ATXN3-230ENST00000554673 MMP24-AS1A0A0U1RRL7 71 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 NDUFS5O43920 106 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 PDE6GP18545 87 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 Q5XG85 94 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 TYMSOSQ8TAI1 123 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 RETNLBQ9BQ08 111 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
ATXN3-230ENST00000554673 LPAP08519 4548 aa3.22□□□□□ -1.89
ATXN3-230ENST00000554673 F8WEM9 126 aa3.22□□□□□ -1.89
ATXN3-230ENST00000554673 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
ATXN3-230ENST00000554673 IGHV6-1A0A0B4J1U7 121 aa3.21□□□□□ -1.9
ATXN3-230ENST00000554673 SNCGO76070 127 aa3.21□□□□□ -1.9
ATXN3-230ENST00000554673 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
ATXN3-230ENST00000554673 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
ATXN3-230ENST00000554673 LINC00304Q8N9R0 145 aa3.21□□□□□ -1.9
ATXN3-230ENST00000554673 PCLOQ9Y6V0 5065 aa3.2□□□□□ -1.9
ATXN3-230ENST00000554673 J3QR89 54 aa3.2□□□□□ -1.9
ATXN3-230ENST00000554673 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
ATXN3-230ENST00000554673 KRTAP13-3Q3SY46 172 aa3.2□□□□□ -1.9
ATXN3-230ENST00000554673 PRO0628Q9UI54 55 aa3.2□□□□□ -1.9
ATXN3-230ENST00000554673 A0A1B0GW54 56 aa3.19□□□□□ -1.9
ATXN3-230ENST00000554673 NREPQ16612 68 aa3.19□□□□□ -1.9
ATXN3-230ENST00000554673 PRR15Q8IV56 129 aa3.19□□□□□ -1.9
ATXN3-230ENST00000554673 FAM236AA0A1B0GUQ0 79 aa3.18□□□□□ -1.9
ATXN3-230ENST00000554673 FAM236BA0A1B0GV22 79 aa3.18□□□□□ -1.9
ATXN3-230ENST00000554673 A8MWP4 228 aa3.18□□□□□ -1.9
ATXN3-230ENST00000554673 C8orf87E5RJ46 101 aa3.18□□□□□ -1.9
ATXN3-230ENST00000554673 UBL5Q9BZL1 73 aa3.18□□□□□ -1.9
ATXN3-230ENST00000554673 A0A1B0GVX0 72 aa3.17□□□□□ -1.9
ATXN3-230ENST00000554673 Q5W150 140 aa3.17□□□□□ -1.9
ATXN3-230ENST00000554673 LRP2P98164 4655 aa3.17□□□□□ -1.9
ATXN3-230ENST00000554673 RPS29P62273 56 aaKnown RBP3.16□□□□□ -1.9
ATXN3-230ENST00000554673 ATP5EP2Q5VTU8 51 aa3.16□□□□□ -1.9
ATXN3-230ENST00000554673 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
ATXN3-230ENST00000554673 RBM12B-AS1Q9P1G2 102 aa3.16□□□□□ -1.9
ATXN3-230ENST00000554673 SPINK1P00995 79 aa3.15□□□□□ -1.91
ATXN3-230ENST00000554673 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
ATXN3-230ENST00000554673 IMUPQ9GZP8 106 aa3.15□□□□□ -1.91
ATXN3-230ENST00000554673 A0A0U1RQV1 116 aa3.14□□□□□ -1.91
ATXN3-230ENST00000554673 CCDC179H3BU77 68 aa3.14□□□□□ -1.91
ATXN3-230ENST00000554673 KRTAP4-1Q9BYQ7 146 aa3.14□□□□□ -1.91
ATXN3-230ENST00000554673 C9orf92A6NGG3 77 aa3.12□□□□□ -1.91
ATXN3-230ENST00000554673 HCG22E2RYF7 251 aa3.12□□□□□ -1.91
ATXN3-230ENST00000554673 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
ATXN3-230ENST00000554673 MT3P25713 68 aa3.12□□□□□ -1.91
ATXN3-230ENST00000554673 ZCCHC13Q8WW36 166 aaKnown RBP3.12□□□□□ -1.91
ATXN3-230ENST00000554673 HERC1Q15751 4861 aa3.12□□□□□ -1.91
ATXN3-230ENST00000554673 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
ATXN3-230ENST00000554673 SPAG11AQ6PDA7 123 aa3.11□□□□□ -1.91
ATXN3-230ENST00000554673 SS18L2Q9UHA2 77 aa3.11□□□□□ -1.91
ATXN3-230ENST00000554673 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
ATXN3-230ENST00000554673 A8MUU9 505 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms