RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 TMEM238LA0A1B0GVL6 79 aa11.66□□□□□ -0.54
FOXA1-204ENST00000554607 A6NJY4 79 aa11.66□□□□□ -0.54
FOXA1-204ENST00000554607 TMEM256-PLSCR3K7ERE1 68 aa11.65□□□□□ -0.54
FOXA1-204ENST00000554607 TRIAP1O43715 76 aa11.65□□□□□ -0.54
FOXA1-204ENST00000554607 CEND1Q8N111 149 aa11.64□□□□□ -0.55
FOXA1-204ENST00000554607 KRTAP6-3Q3LI67 103 aa11.62□□□□□ -0.55
FOXA1-204ENST00000554607 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
FOXA1-204ENST00000554607 SPATA45Q537H7 98 aa11.57□□□□□ -0.56
FOXA1-204ENST00000554607 PAM16Q9Y3D7 125 aa11.57□□□□□ -0.56
FOXA1-204ENST00000554607 UBE2V1Q13404 147 aa11.55□□□□□ -0.56
FOXA1-204ENST00000554607 J3KT08 172 aa11.54□□□□□ -0.56
FOXA1-204ENST00000554607 Q8N9P0 234 aaPredicted RBP11.54□□□□□ -0.56
FOXA1-204ENST00000554607 VPS25Q9BRG1 176 aa11.54□□□□□ -0.56
FOXA1-204ENST00000554607 PSMB2P49721 201 aa11.53□□□□□ -0.56
FOXA1-204ENST00000554607 FXYD2P54710 66 aa11.53□□□□□ -0.56
FOXA1-204ENST00000554607 WFDC13Q8IUB5 93 aa11.53□□□□□ -0.56
FOXA1-204ENST00000554607 COX6CP09669 75 aa11.52□□□□□ -0.57
FOXA1-204ENST00000554607 C21orf62-AS1Q17RA5 79 aa11.49□□□□□ -0.57
FOXA1-204ENST00000554607 VAMP8Q9BV40 100 aa11.49□□□□□ -0.57
FOXA1-204ENST00000554607 TMA7Q9Y2S6 64 aaKnown RBP11.48□□□□□ -0.57
FOXA1-204ENST00000554607 NDUFB1O75438 58 aa11.47□□□□□ -0.57
FOXA1-204ENST00000554607 RBM3P98179 157 aaKnown RBP11.47□□□□□ -0.57
FOXA1-204ENST00000554607 LYRM7Q5U5X0 104 aa11.47□□□□□ -0.57
FOXA1-204ENST00000554607 DSCR8Q96T75 97 aa11.47□□□□□ -0.57
FOXA1-204ENST00000554607 Q6ZQT0 140 aa11.38□□□□□ -0.59
FOXA1-204ENST00000554607 K7ERJ3 54 aa11.37□□□□□ -0.59
FOXA1-204ENST00000554607 C8orf17Q9NRJ1 99 aa11.37□□□□□ -0.59
FOXA1-204ENST00000554607 C9JAW5 83 aa11.36□□□□□ -0.59
FOXA1-204ENST00000554607 HSD52Q0P140 79 aa11.35□□□□□ -0.59
FOXA1-204ENST00000554607 H1FX-AS1Q4G0G2 97 aa11.35□□□□□ -0.59
FOXA1-204ENST00000554607 NEBP20929 6669 aa11.35□□□□□ -0.59
FOXA1-204ENST00000554607 IGKV3D-7A0A0C4DH55 119 aa11.32□□□□□ -0.6
FOXA1-204ENST00000554607 LOC105371267A0A1B0GV96 52 aa11.32□□□□□ -0.6
FOXA1-204ENST00000554607 Q6ZVQ6 151 aa11.29□□□□□ -0.6
FOXA1-204ENST00000554607 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
FOXA1-204ENST00000554607 BAALC-AS2P0C853 105 aa11.26□□□□□ -0.61
FOXA1-204ENST00000554607 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
FOXA1-204ENST00000554607 A0A1B0GW54 56 aa11.24□□□□□ -0.61
FOXA1-204ENST00000554607 PRR15Q8IV56 129 aa11.18□□□□□ -0.62
FOXA1-204ENST00000554607 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
FOXA1-204ENST00000554607 MUC12Q9UKN1 5478 aa11.16□□□□□ -0.62
FOXA1-204ENST00000554607 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
FOXA1-204ENST00000554607 TMEM254Q8TBM7 123 aa11.16□□□□□ -0.62
FOXA1-204ENST00000554607 LOC110117498A0A087WWA1 95 aa11.13□□□□□ -0.63
FOXA1-204ENST00000554607 A6NN06 94 aa11.12□□□□□ -0.63
FOXA1-204ENST00000554607 PDE6GP18545 87 aa11.12□□□□□ -0.63
FOXA1-204ENST00000554607 MMP24-AS1A0A0U1RRL7 71 aa11.1□□□□□ -0.63
FOXA1-204ENST00000554607 NDUFS5O43920 106 aa11.08□□□□□ -0.64
FOXA1-204ENST00000554607 NREPQ16612 68 aa11.08□□□□□ -0.64
FOXA1-204ENST00000554607 IGKV2D-30A0A075B6S6 120 aa11.06□□□□□ -0.64
FOXA1-204ENST00000554607 hDV103S1A0JD37 113 aa11.06□□□□□ -0.64
FOXA1-204ENST00000554607 IGKV2-30P06310 120 aa11.06□□□□□ -0.64
FOXA1-204ENST00000554607 UQCR10Q9UDW1 63 aa11.06□□□□□ -0.64
FOXA1-204ENST00000554607 C7orf65Q6ZTY9 151 aa11.05□□□□□ -0.64
FOXA1-204ENST00000554607 ATXN8Q156A1 80 aa11.03□□□□□ -0.64
FOXA1-204ENST00000554607 PYY3Q5JQD4 70 aa11.03□□□□□ -0.64
FOXA1-204ENST00000554607 KRTAP20-1Q3LI63 56 aa11.01□□□□□ -0.65
FOXA1-204ENST00000554607 SMIM6P0DI80 62 aa11□□□□□ -0.65
FOXA1-204ENST00000554607 FAM236AA0A1B0GUQ0 79 aa10.99□□□□□ -0.65
FOXA1-204ENST00000554607 FAM236BA0A1B0GV22 79 aa10.99□□□□□ -0.65
FOXA1-204ENST00000554607 Q5VV11 94 aa10.99□□□□□ -0.65
FOXA1-204ENST00000554607 C14orf132Q9NPU4 83 aa10.99□□□□□ -0.65
FOXA1-204ENST00000554607 MT1BP07438 61 aa10.97□□□□□ -0.65
FOXA1-204ENST00000554607 K7EQZ3 153 aa10.95□□□□□ -0.66
FOXA1-204ENST00000554607 Q5W150 140 aa10.95□□□□□ -0.66
FOXA1-204ENST00000554607 C5orf47Q569G3 176 aa10.93□□□□□ -0.66
FOXA1-204ENST00000554607 C4orf26Q17RF5 130 aa10.92□□□□□ -0.66
FOXA1-204ENST00000554607 KRTAP19-8Q3LI54 63 aa10.9□□□□□ -0.66
FOXA1-204ENST00000554607 SPRR2GQ9BYE4 73 aa10.88□□□□□ -0.67
FOXA1-204ENST00000554607 KRTAP10-5P60370 271 aa10.86□□□□□ -0.67
FOXA1-204ENST00000554607 KRTAP5-9P26371 169 aa10.85□□□□□ -0.67
FOXA1-204ENST00000554607 NAA38Q9BRA0 125 aaKnown RBP10.83□□□□□ -0.68
FOXA1-204ENST00000554607 CSAG1Q6PB30 78 aa10.82□□□□□ -0.68
FOXA1-204ENST00000554607 BPY2O14599 106 aa10.81□□□□□ -0.68
FOXA1-204ENST00000554607 S4R3F8 94 aa10.8□□□□□ -0.68
FOXA1-204ENST00000554607 MDN1Q9NU22 5596 aa10.79□□□□□ -0.68
FOXA1-204ENST00000554607 HCG22E2RYF7 251 aa10.78□□□□□ -0.68
FOXA1-204ENST00000554607 CASC2Q6XLA1 102 aa10.78□□□□□ -0.68
FOXA1-204ENST00000554607 KMT2DO14686 5537 aa10.78□□□□□ -0.68
FOXA1-204ENST00000554607 M0R143 59 aa10.76□□□□□ -0.69
FOXA1-204ENST00000554607 CXCL6P80162 114 aa10.76□□□□□ -0.69
FOXA1-204ENST00000554607 KRTAP3-1Q9BYR8 98 aa10.72□□□□□ -0.69
FOXA1-204ENST00000554607 PCP4L1A6NKN8 68 aa10.7□□□□□ -0.7
FOXA1-204ENST00000554607 TSTD3H0UI37 97 aa10.69□□□□□ -0.7
FOXA1-204ENST00000554607 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
FOXA1-204ENST00000554607 LCA10Q71F78 164 aa10.69□□□□□ -0.7
FOXA1-204ENST00000554607 Q8N9L7 120 aa10.67□□□□□ -0.7
FOXA1-204ENST00000554607 C1orf64Q8NEQ6 169 aa10.67□□□□□ -0.7
FOXA1-204ENST00000554607 IMUPQ9GZP8 106 aa10.63□□□□□ -0.71
FOXA1-204ENST00000554607 H3BT86 120 aa10.6□□□□□ -0.71
FOXA1-204ENST00000554607 KRTAP2-3P0C7H8 128 aa10.6□□□□□ -0.71
FOXA1-204ENST00000554607 KRTAP2-4Q9BYR9 128 aa10.6□□□□□ -0.71
FOXA1-204ENST00000554607 CRIPTQ9P021 101 aa10.55□□□□□ -0.72
FOXA1-204ENST00000554607 TP53AIP1Q9HCN2 124 aa10.41□□□□□ -0.74
FOXA1-204ENST00000554607 SPRR2FQ96RM1 72 aa10.4□□□□□ -0.74
FOXA1-204ENST00000554607 BATFQ16520 125 aa10.39□□□□□ -0.75
FOXA1-204ENST00000554607 C9orf118A6NHY6 69 aa10.38□□□□□ -0.75
FOXA1-204ENST00000554607 SPRR2EP22531 72 aa10.38□□□□□ -0.75
FOXA1-204ENST00000554607 SPRR2BP35325 72 aa10.38□□□□□ -0.75
FOXA1-204ENST00000554607 SPRR2AP35326 72 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms