RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 Q96NJ1 140 aa5.47□□□□□ -1.53
PTCD2P1-201ENST00000554393 ANKRD29Q8N6D5 301 aa5.46□□□□□ -1.54
PTCD2P1-201ENST00000554393 C20orf166-AS1Q96NR2 134 aa5.46□□□□□ -1.54
PTCD2P1-201ENST00000554393 SSPOA2VEC9 5147 aa5.45□□□□□ -1.54
PTCD2P1-201ENST00000554393 TRACP01848 142 aa5.45□□□□□ -1.54
PTCD2P1-201ENST00000554393 UBE2V1Q13404 147 aa5.45□□□□□ -1.54
PTCD2P1-201ENST00000554393 A8MUU9 505 aa5.44□□□□□ -1.54
PTCD2P1-201ENST00000554393 COX6B2Q6YFQ2 88 aa5.44□□□□□ -1.54
PTCD2P1-201ENST00000554393 SYNE2Q8WXH0 6885 aaKnown RBP5.42□□□□□ -1.54
PTCD2P1-201ENST00000554393 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
PTCD2P1-201ENST00000554393 SIGMAR1Q99720 223 aa5.42□□□□□ -1.54
PTCD2P1-201ENST00000554393 TSTD3H0UI37 97 aa5.41□□□□□ -1.54
PTCD2P1-201ENST00000554393 CCKP06307 115 aa5.41□□□□□ -1.54
PTCD2P1-201ENST00000554393 FLGP20930 4061 aaPredicted RBP5.4□□□□□ -1.54
PTCD2P1-201ENST00000554393 A0A1B0GV72 72 aa5.4□□□□□ -1.54
PTCD2P1-201ENST00000554393 IGKV4-1P06312 121 aa5.4□□□□□ -1.54
PTCD2P1-201ENST00000554393 SCGB1C2P0DMR2 95 aa5.4□□□□□ -1.54
PTCD2P1-201ENST00000554393 DSCR10P59022 87 aa5.39□□□□□ -1.55
PTCD2P1-201ENST00000554393 LINC00313P59037 77 aa5.39□□□□□ -1.55
PTCD2P1-201ENST00000554393 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
PTCD2P1-201ENST00000554393 LINC00472Q9H8W2 130 aa5.39□□□□□ -1.55
PTCD2P1-201ENST00000554393 USH2AO75445 5202 aa5.39□□□□□ -1.55
PTCD2P1-201ENST00000554393 M0R143 59 aa5.38□□□□□ -1.55
PTCD2P1-201ENST00000554393 M0R2T5 61 aa5.38□□□□□ -1.55
PTCD2P1-201ENST00000554393 RBM3P98179 157 aaKnown RBP5.38□□□□□ -1.55
PTCD2P1-201ENST00000554393 DSCR8Q96T75 97 aa5.37□□□□□ -1.55
PTCD2P1-201ENST00000554393 KRTAP16-1A8MUX0 517 aa5.36□□□□□ -1.55
PTCD2P1-201ENST00000554393 BAALC-AS2P0C853 105 aa5.36□□□□□ -1.55
PTCD2P1-201ENST00000554393 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
PTCD2P1-201ENST00000554393 FCGBPQ9Y6R7 5405 aaPredicted RBP5.35□□□□□ -1.55
PTCD2P1-201ENST00000554393 C9JAW5 83 aa5.34□□□□□ -1.55
PTCD2P1-201ENST00000554393 ATXN8Q156A1 80 aa5.34□□□□□ -1.55
PTCD2P1-201ENST00000554393 VPS25Q9BRG1 176 aa5.34□□□□□ -1.55
PTCD2P1-201ENST00000554393 TRBV20-1A0A075B6N2 111 aa5.33□□□□□ -1.56
PTCD2P1-201ENST00000554393 C8orf87E5RJ46 101 aa5.33□□□□□ -1.56
PTCD2P1-201ENST00000554393 DEFB116Q30KQ4 102 aa5.33□□□□□ -1.56
PTCD2P1-201ENST00000554393 IGHV6-1A0A0B4J1U7 121 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 A0A1B0GW54 56 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 JMJD7-PLA2G4BH0Y9G9 81 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 J3KT08 172 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
PTCD2P1-201ENST00000554393 LYRM7Q5U5X0 104 aa5.31□□□□□ -1.56
PTCD2P1-201ENST00000554393 Q6ZQT0 140 aa5.31□□□□□ -1.56
PTCD2P1-201ENST00000554393 LOC110117498A0A087WWA1 95 aa5.3□□□□□ -1.56
PTCD2P1-201ENST00000554393 PDE6GP18545 87 aa5.3□□□□□ -1.56
PTCD2P1-201ENST00000554393 NAA38Q9BRA0 125 aaKnown RBP5.28□□□□□ -1.56
PTCD2P1-201ENST00000554393 NDUFB1O75438 58 aa5.26□□□□□ -1.57
PTCD2P1-201ENST00000554393 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
PTCD2P1-201ENST00000554393 RBM12B-AS1Q9P1G2 102 aa5.25□□□□□ -1.57
PTCD2P1-201ENST00000554393 A8MWP4 228 aa5.24□□□□□ -1.57
PTCD2P1-201ENST00000554393 HRES1P13985 223 aa5.24□□□□□ -1.57
PTCD2P1-201ENST00000554393 FAM236DA0A1B0GTK5 79 aa5.23□□□□□ -1.57
PTCD2P1-201ENST00000554393 FAM236CP0DP71 79 aa5.23□□□□□ -1.57
PTCD2P1-201ENST00000554393 Q8N9P0 234 aaPredicted RBP5.23□□□□□ -1.57
PTCD2P1-201ENST00000554393 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
PTCD2P1-201ENST00000554393 C14orf132Q9NPU4 83 aa5.23□□□□□ -1.57
PTCD2P1-201ENST00000554393 PCP4L1A6NKN8 68 aa5.21□□□□□ -1.58
PTCD2P1-201ENST00000554393 BATFQ16520 125 aa5.21□□□□□ -1.58
PTCD2P1-201ENST00000554393 C8orf17Q9NRJ1 99 aa5.21□□□□□ -1.58
PTCD2P1-201ENST00000554393 IGKV3D-7A0A0C4DH55 119 aa5.2□□□□□ -1.58
PTCD2P1-201ENST00000554393 H3BT86 120 aa5.2□□□□□ -1.58
PTCD2P1-201ENST00000554393 NREPQ16612 68 aa5.19□□□□□ -1.58
PTCD2P1-201ENST00000554393 A0A1W2PPM0 123 aa5.18□□□□□ -1.58
PTCD2P1-201ENST00000554393 COL5A1-AS1Q5SY13 56 aa5.18□□□□□ -1.58
PTCD2P1-201ENST00000554393 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
PTCD2P1-201ENST00000554393 MTURNQ8N3F0 131 aa5.18□□□□□ -1.58
PTCD2P1-201ENST00000554393 TAX1BP3O14907 124 aa5.17□□□□□ -1.58
PTCD2P1-201ENST00000554393 SPINK7P58062 85 aa5.17□□□□□ -1.58
PTCD2P1-201ENST00000554393 Q6ZVQ6 151 aa5.17□□□□□ -1.58
PTCD2P1-201ENST00000554393 NEBP20929 6669 aa5.17□□□□□ -1.58
PTCD2P1-201ENST00000554393 MMP24-AS1A0A0U1RRL7 71 aa5.14□□□□□ -1.59
PTCD2P1-201ENST00000554393 TMEM254Q8TBM7 123 aa5.14□□□□□ -1.59
PTCD2P1-201ENST00000554393 MRPL34Q9BQ48 92 aaKnown RBP5.13□□□□□ -1.59
PTCD2P1-201ENST00000554393 MT2AP02795 61 aa5.12□□□□□ -1.59
PTCD2P1-201ENST00000554393 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
PTCD2P1-201ENST00000554393 K7EQZ3 153 aa5.11□□□□□ -1.59
PTCD2P1-201ENST00000554393 BPY2O14599 106 aa5.1□□□□□ -1.59
PTCD2P1-201ENST00000554393 WFDC13Q8IUB5 93 aa5.1□□□□□ -1.59
PTCD2P1-201ENST00000554393 SPCS1Q9Y6A9 102 aa5.09□□□□□ -1.59
PTCD2P1-201ENST00000554393 MT1FP04733 61 aa5.08□□□□□ -1.6
PTCD2P1-201ENST00000554393 KRTAP20-1Q3LI63 56 aa5.07□□□□□ -1.6
PTCD2P1-201ENST00000554393 NDUFS5O43920 106 aa5.06□□□□□ -1.6
PTCD2P1-201ENST00000554393 PCP4P48539 62 aa5.06□□□□□ -1.6
PTCD2P1-201ENST00000554393 KRTAP6-3Q3LI67 103 aa5.06□□□□□ -1.6
PTCD2P1-201ENST00000554393 GTF2H5Q6ZYL4 71 aa5.06□□□□□ -1.6
PTCD2P1-201ENST00000554393 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
PTCD2P1-201ENST00000554393 CASC2Q6XLA1 102 aa5.03□□□□□ -1.6
PTCD2P1-201ENST00000554393 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
PTCD2P1-201ENST00000554393 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
PTCD2P1-201ENST00000554393 K7EP34 96 aa5.01□□□□□ -1.61
PTCD2P1-201ENST00000554393 IGKV2-30P06310 120 aa5.01□□□□□ -1.61
PTCD2P1-201ENST00000554393 Q8N9L7 120 aa5.01□□□□□ -1.61
PTCD2P1-201ENST00000554393 UBL5Q9BZL1 73 aa5.01□□□□□ -1.61
PTCD2P1-201ENST00000554393 H1FX-AS1Q4G0G2 97 aa5□□□□□ -1.61
PTCD2P1-201ENST00000554393 Q5W150 140 aa5□□□□□ -1.61
PTCD2P1-201ENST00000554393 LINC00846Q9NV44 126 aa5□□□□□ -1.61
PTCD2P1-201ENST00000554393 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
PTCD2P1-201ENST00000554393 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
PTCD2P1-201ENST00000554393 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms