RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 ZNF861PO60384 105 aa8.82□□□□□ -1
PPP4R3A-201ENST00000554308 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
PPP4R3A-201ENST00000554308 Q8N9P0 234 aaPredicted RBP8.8□□□□□ -1
PPP4R3A-201ENST00000554308 SPANXA2-OT1Q8N9U9 137 aa8.8□□□□□ -1
PPP4R3A-201ENST00000554308 KMT2CQ8NEZ4 4911 aaKnown RBP8.78□□□□□ -1
PPP4R3A-201ENST00000554308 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
PPP4R3A-201ENST00000554308 H3BPC8 53 aa8.77□□□□□ -1.01
PPP4R3A-201ENST00000554308 PCOTHQ58A44 107 aa8.77□□□□□ -1.01
PPP4R3A-201ENST00000554308 PRR15LQ9BU68 103 aa8.77□□□□□ -1.01
PPP4R3A-201ENST00000554308 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
PPP4R3A-201ENST00000554308 PMAIP1Q13794 54 aa8.76□□□□□ -1.01
PPP4R3A-201ENST00000554308 ZNF706Q9Y5V0 76 aaPredicted RBP8.75□□□□□ -1.01
PPP4R3A-201ENST00000554308 Q6ZSA8 131 aa8.75□□□□□ -1.01
PPP4R3A-201ENST00000554308 VPS13BQ7Z7G8 4022 aa8.74□□□□□ -1.01
PPP4R3A-201ENST00000554308 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
PPP4R3A-201ENST00000554308 MOBPQ13875 183 aa8.74□□□□□ -1.01
PPP4R3A-201ENST00000554308 COA5Q86WW8 74 aa8.74□□□□□ -1.01
PPP4R3A-201ENST00000554308 Q96NJ1 140 aa8.73□□□□□ -1.01
PPP4R3A-201ENST00000554308 SEC61GP60059 68 aa8.73□□□□□ -1.01
PPP4R3A-201ENST00000554308 CD164Q04900 197 aa8.72□□□□□ -1.01
PPP4R3A-201ENST00000554308 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
PPP4R3A-201ENST00000554308 IGLV7-46A0A075B6I9 117 aa8.69□□□□□ -1.02
PPP4R3A-201ENST00000554308 LCA10Q71F78 164 aa8.66□□□□□ -1.02
PPP4R3A-201ENST00000554308 IGHV6-1A0A0B4J1U7 121 aa8.66□□□□□ -1.02
PPP4R3A-201ENST00000554308 RYR2Q92736 4967 aa8.66□□□□□ -1.02
PPP4R3A-201ENST00000554308 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
PPP4R3A-201ENST00000554308 C8orf17Q9NRJ1 99 aa8.65□□□□□ -1.02
PPP4R3A-201ENST00000554308 NDUFS5O43920 106 aa8.65□□□□□ -1.02
PPP4R3A-201ENST00000554308 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
PPP4R3A-201ENST00000554308 A0A087X002 238 aa8.64□□□□□ -1.03
PPP4R3A-201ENST00000554308 NOTCH2NLQ7Z3S9 236 aa8.64□□□□□ -1.03
PPP4R3A-201ENST00000554308 DYNC1H1Q14204 4646 aaKnown RBP8.64□□□□□ -1.03
PPP4R3A-201ENST00000554308 SPAG11AQ6PDA7 123 aa8.63□□□□□ -1.03
PPP4R3A-201ENST00000554308 A6NED7 52 aa8.62□□□□□ -1.03
PPP4R3A-201ENST00000554308 Q75L30 129 aa8.62□□□□□ -1.03
PPP4R3A-201ENST00000554308 LOC101927531A0A1B0GV80 90 aa8.6□□□□□ -1.03
PPP4R3A-201ENST00000554308 TP53AIP1Q9HCN2 124 aa8.6□□□□□ -1.03
PPP4R3A-201ENST00000554308 A0A1B0GVX0 72 aa8.59□□□□□ -1.03
PPP4R3A-201ENST00000554308 SMR3BP02814 79 aaPredicted RBP8.59□□□□□ -1.03
PPP4R3A-201ENST00000554308 FAT1Q14517 4588 aa8.57□□□□□ -1.04
PPP4R3A-201ENST00000554308 HRES1P13985 223 aa8.57□□□□□ -1.04
PPP4R3A-201ENST00000554308 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
PPP4R3A-201ENST00000554308 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
PPP4R3A-201ENST00000554308 CDK2AP2O75956 126 aa8.53□□□□□ -1.04
PPP4R3A-201ENST00000554308 LINC01558Q9Y6Z2 57 aa8.53□□□□□ -1.04
PPP4R3A-201ENST00000554308 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
PPP4R3A-201ENST00000554308 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.04
PPP4R3A-201ENST00000554308 RYR3Q15413 4870 aa8.52□□□□□ -1.05
PPP4R3A-201ENST00000554308 SPINK7P58062 85 aa8.52□□□□□ -1.05
PPP4R3A-201ENST00000554308 Q5W150 140 aa8.52□□□□□ -1.05
PPP4R3A-201ENST00000554308 SSBP3-AS1Q7Z2R9 100 aa8.52□□□□□ -1.05
PPP4R3A-201ENST00000554308 PLA2G1BP04054 148 aaKnown RBP8.51□□□□□ -1.05
PPP4R3A-201ENST00000554308 APOBP04114 4563 aaKnown RBP8.51□□□□□ -1.05
PPP4R3A-201ENST00000554308 ATP11AUNQ6ZP68 121 aa8.51□□□□□ -1.05
PPP4R3A-201ENST00000554308 KRTAP1-4P0C5Y4 121 aa8.5□□□□□ -1.05
PPP4R3A-201ENST00000554308 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
PPP4R3A-201ENST00000554308 A6NN06 94 aa8.49□□□□□ -1.05
PPP4R3A-201ENST00000554308 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
PPP4R3A-201ENST00000554308 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
PPP4R3A-201ENST00000554308 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
PPP4R3A-201ENST00000554308 TYMSOSQ8TAI1 123 aa8.42□□□□□ -1.06
PPP4R3A-201ENST00000554308 RBM12B-AS1Q9P1G2 102 aa8.4□□□□□ -1.06
PPP4R3A-201ENST00000554308 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
PPP4R3A-201ENST00000554308 C4orf48Q5BLP8 95 aa8.38□□□□□ -1.07
PPP4R3A-201ENST00000554308 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
PPP4R3A-201ENST00000554308 C7orf65Q6ZTY9 151 aa8.32□□□□□ -1.08
PPP4R3A-201ENST00000554308 ACYP2P14621 99 aa8.31□□□□□ -1.08
PPP4R3A-201ENST00000554308 SPINK1P00995 79 aa8.29□□□□□ -1.08
PPP4R3A-201ENST00000554308 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
PPP4R3A-201ENST00000554308 HSPG2P98160 4391 aa8.28□□□□□ -1.08
PPP4R3A-201ENST00000554308 DMAC1Q96GE9 116 aa8.28□□□□□ -1.08
PPP4R3A-201ENST00000554308 LINC00313P59037 77 aa8.26□□□□□ -1.09
PPP4R3A-201ENST00000554308 LRP1Q07954 4544 aaKnown RBP8.26□□□□□ -1.09
PPP4R3A-201ENST00000554308 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
PPP4R3A-201ENST00000554308 C8orf87E5RJ46 101 aa8.24□□□□□ -1.09
PPP4R3A-201ENST00000554308 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
PPP4R3A-201ENST00000554308 PRAC1Q96KF2 57 aa8.23□□□□□ -1.09
PPP4R3A-201ENST00000554308 PKHD1L1Q86WI1 4243 aa8.21□□□□□ -1.09
PPP4R3A-201ENST00000554308 IGKV2-30P06310 120 aa8.21□□□□□ -1.1
PPP4R3A-201ENST00000554308 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
PPP4R3A-201ENST00000554308 EPPK1P58107 5090 aaKnown RBP8.21□□□□□ -1.1
PPP4R3A-201ENST00000554308 A0A1B0GU69 56 aa8.2□□□□□ -1.1
PPP4R3A-201ENST00000554308 Q5VSD8 79 aa8.2□□□□□ -1.1
PPP4R3A-201ENST00000554308 RYR1P21817 5038 aa8.2□□□□□ -1.1
PPP4R3A-201ENST00000554308 FLG2Q5D862 2391 aaPredicted RBP8.18□□□□□ -1.1
PPP4R3A-201ENST00000554308 KRTAP16-1A8MUX0 517 aa8.17□□□□□ -1.1
PPP4R3A-201ENST00000554308 IGKV2D-30A0A075B6S6 120 aa8.16□□□□□ -1.1
PPP4R3A-201ENST00000554308 MYCBP2O75592 4640 aa8.16□□□□□ -1.1
PPP4R3A-201ENST00000554308 KRTAP17-1Q9BYP8 105 aa8.13□□□□□ -1.11
PPP4R3A-201ENST00000554308 RPS29P62273 56 aaKnown RBP8.12□□□□□ -1.11
PPP4R3A-201ENST00000554308 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
PPP4R3A-201ENST00000554308 DMBT1Q9UGM3 2413 aaPredicted RBP8.1□□□□□ -1.11
PPP4R3A-201ENST00000554308 TNXBP22105 4242 aa8.09□□□□□ -1.12
PPP4R3A-201ENST00000554308 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
PPP4R3A-201ENST00000554308 Q8N1X5 172 aa8.08□□□□□ -1.12
PPP4R3A-201ENST00000554308 C9orf92A6NGG3 77 aa8.08□□□□□ -1.12
PPP4R3A-201ENST00000554308 UQCR11O14957 56 aa8.04□□□□□ -1.12
PPP4R3A-201ENST00000554308 FAT3Q8TDW7 4589 aa8.02□□□□□ -1.13
PPP4R3A-201ENST00000554308 KRTAP10-8P60410 259 aa8.01□□□□□ -1.13
PPP4R3A-201ENST00000554308 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms