RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 A0A1B0GVX0 72 aa9.95□□□□□ -0.82
PSEN1-210ENST00000554131 RNF213Q63HN8 5207 aa9.94□□□□□ -0.82
PSEN1-210ENST00000554131 A8MWP4 228 aa9.94□□□□□ -0.82
PSEN1-210ENST00000554131 IGHV6-1A0A0B4J1U7 121 aa9.93□□□□□ -0.82
PSEN1-210ENST00000554131 IGKV3D-7A0A0C4DH55 119 aa9.93□□□□□ -0.82
PSEN1-210ENST00000554131 KRTAP16-1A8MUX0 517 aa9.93□□□□□ -0.82
PSEN1-210ENST00000554131 LINC00313P59037 77 aa9.9□□□□□ -0.82
PSEN1-210ENST00000554131 RPL37P61927 97 aaKnown RBP9.9□□□□□ -0.82
PSEN1-210ENST00000554131 UBL5Q9BZL1 73 aa9.9□□□□□ -0.82
PSEN1-210ENST00000554131 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
PSEN1-210ENST00000554131 C8orf87E5RJ46 101 aa9.88□□□□□ -0.83
PSEN1-210ENST00000554131 BPY2O14599 106 aa9.88□□□□□ -0.83
PSEN1-210ENST00000554131 PRR15Q8IV56 129 aa9.88□□□□□ -0.83
PSEN1-210ENST00000554131 C20orf166-AS1Q96NR2 134 aa9.88□□□□□ -0.83
PSEN1-210ENST00000554131 NDUFB1O75438 58 aa9.87□□□□□ -0.83
PSEN1-210ENST00000554131 Q75L30 129 aa9.87□□□□□ -0.83
PSEN1-210ENST00000554131 A8MUU9 505 aa9.86□□□□□ -0.83
PSEN1-210ENST00000554131 K7EQZ3 153 aa9.86□□□□□ -0.83
PSEN1-210ENST00000554131 ACYP1P07311 99 aa9.86□□□□□ -0.83
PSEN1-210ENST00000554131 SEC61BP60468 96 aaKnown RBP9.85□□□□□ -0.83
PSEN1-210ENST00000554131 MUC2Q02817 5179 aa9.84□□□□□ -0.83
PSEN1-210ENST00000554131 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
PSEN1-210ENST00000554131 KRTAP4-1Q9BYQ7 146 aa9.83□□□□□ -0.84
PSEN1-210ENST00000554131 PCOTHQ58A44 107 aa9.82□□□□□ -0.84
PSEN1-210ENST00000554131 MMP24-AS1A0A0U1RRL7 71 aa9.81□□□□□ -0.84
PSEN1-210ENST00000554131 Q8N9L7 120 aa9.81□□□□□ -0.84
PSEN1-210ENST00000554131 CXCL6P80162 114 aa9.77□□□□□ -0.85
PSEN1-210ENST00000554131 Q8N9P0 234 aaPredicted RBP9.75□□□□□ -0.85
PSEN1-210ENST00000554131 TMEM254Q8TBM7 123 aa9.72□□□□□ -0.85
PSEN1-210ENST00000554131 hDV103S1A0JD37 113 aa9.7□□□□□ -0.86
PSEN1-210ENST00000554131 ATP11AUNQ6ZP68 121 aa9.7□□□□□ -0.86
PSEN1-210ENST00000554131 J3QR89 54 aa9.69□□□□□ -0.86
PSEN1-210ENST00000554131 MRPL34Q9BQ48 92 aaKnown RBP9.69□□□□□ -0.86
PSEN1-210ENST00000554131 ATP5EP2Q5VTU8 51 aa9.67□□□□□ -0.86
PSEN1-210ENST00000554131 LINC00643Q86TS7 51 aa9.67□□□□□ -0.86
PSEN1-210ENST00000554131 WFDC13Q8IUB5 93 aa9.65□□□□□ -0.86
PSEN1-210ENST00000554131 CASC2Q6XLA1 102 aa9.64□□□□□ -0.87
PSEN1-210ENST00000554131 HCG22E2RYF7 251 aa9.63□□□□□ -0.87
PSEN1-210ENST00000554131 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
PSEN1-210ENST00000554131 K7ERU9 68 aa9.57□□□□□ -0.88
PSEN1-210ENST00000554131 KRTAP19-2Q3LHN2 52 aa9.56□□□□□ -0.88
PSEN1-210ENST00000554131 FAT4Q6V0I7 4981 aa9.55□□□□□ -0.88
PSEN1-210ENST00000554131 NDUFS5O43920 106 aa9.53□□□□□ -0.88
PSEN1-210ENST00000554131 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.89
PSEN1-210ENST00000554131 A0A087WVE0 104 aa9.51□□□□□ -0.89
PSEN1-210ENST00000554131 Q5W150 140 aa9.51□□□□□ -0.89
PSEN1-210ENST00000554131 LCE2CQ5TA81 110 aa9.48□□□□□ -0.89
PSEN1-210ENST00000554131 HRES1P13985 223 aa9.44□□□□□ -0.9
PSEN1-210ENST00000554131 A0A0U1RQV1 116 aa9.43□□□□□ -0.9
PSEN1-210ENST00000554131 SPINK7P58062 85 aa9.43□□□□□ -0.9
PSEN1-210ENST00000554131 MT-ATP8P03928 68 aa9.42□□□□□ -0.9
PSEN1-210ENST00000554131 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
PSEN1-210ENST00000554131 TP53AIP1Q9HCN2 124 aa9.41□□□□□ -0.9
PSEN1-210ENST00000554131 LCE2AQ5TA79 106 aaPredicted RBP9.37□□□□□ -0.91
PSEN1-210ENST00000554131 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
PSEN1-210ENST00000554131 FLGP20930 4061 aaPredicted RBP9.31□□□□□ -0.92
PSEN1-210ENST00000554131 IGKV2D-30A0A075B6S6 120 aa9.3□□□□□ -0.92
PSEN1-210ENST00000554131 IGKV2-30P06310 120 aa9.3□□□□□ -0.92
PSEN1-210ENST00000554131 C7orf65Q6ZTY9 151 aa9.3□□□□□ -0.92
PSEN1-210ENST00000554131 OCR1Q9BZK8 76 aa9.3□□□□□ -0.92
PSEN1-210ENST00000554131 UQCRQO14949 82 aa9.28□□□□□ -0.92
PSEN1-210ENST00000554131 MT1HP80294 61 aa9.28□□□□□ -0.92
PSEN1-210ENST00000554131 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
PSEN1-210ENST00000554131 COX6B2Q6YFQ2 88 aa9.27□□□□□ -0.93
PSEN1-210ENST00000554131 RBM12B-AS1Q9P1G2 102 aa9.24□□□□□ -0.93
PSEN1-210ENST00000554131 H0Y9P7 68 aa9.2□□□□□ -0.94
PSEN1-210ENST00000554131 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
PSEN1-210ENST00000554131 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
PSEN1-210ENST00000554131 CYP4F30PQ9H0H9 118 aa9.18□□□□□ -0.94
PSEN1-210ENST00000554131 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
PSEN1-210ENST00000554131 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
PSEN1-210ENST00000554131 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
PSEN1-210ENST00000554131 SCGB1A1P11684 91 aa9.16□□□□□ -0.94
PSEN1-210ENST00000554131 ATOX1O00244 68 aa9.15□□□□□ -0.94
PSEN1-210ENST00000554131 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
PSEN1-210ENST00000554131 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
PSEN1-210ENST00000554131 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
PSEN1-210ENST00000554131 LINC00208Q96KT6 92 aa9.09□□□□□ -0.95
PSEN1-210ENST00000554131 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
PSEN1-210ENST00000554131 MP68P56378 58 aa9.07□□□□□ -0.96
PSEN1-210ENST00000554131 TRAV7A0A075B6U4 112 aa9.06□□□□□ -0.96
PSEN1-210ENST00000554131 SMIM20Q8N5G0 67 aa9.06□□□□□ -0.96
PSEN1-210ENST00000554131 H3BPC8 53 aa9.04□□□□□ -0.96
PSEN1-210ENST00000554131 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
PSEN1-210ENST00000554131 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
PSEN1-210ENST00000554131 M0R2T5 61 aa9.02□□□□□ -0.97
PSEN1-210ENST00000554131 LORP23490 312 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-210ENST00000554131 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
PSEN1-210ENST00000554131 SERP2Q8N6R1 65 aa8.93□□□□□ -0.98
PSEN1-210ENST00000554131 KRTAP9-8Q9BYQ0 159 aa8.88□□□□□ -0.99
PSEN1-210ENST00000554131 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
PSEN1-210ENST00000554131 LCA10Q71F78 164 aa8.82□□□□□ -1
PSEN1-210ENST00000554131 S4R3F8 94 aa8.82□□□□□ -1
PSEN1-210ENST00000554131 A8MUN3 132 aa8.81□□□□□ -1
PSEN1-210ENST00000554131 C20orf197Q8N268 126 aa8.81□□□□□ -1
PSEN1-210ENST00000554131 COX7CP15954 63 aa8.8□□□□□ -1
PSEN1-210ENST00000554131 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
PSEN1-210ENST00000554131 MT2AP02795 61 aa8.78□□□□□ -1
PSEN1-210ENST00000554131 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
PSEN1-210ENST00000554131 MT1FP04733 61 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 214.1 ms