RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 TNXBP22105 4242 aa6.16□□□□□ -1.42
PABPN1-203ENST00000553960 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
PABPN1-203ENST00000553960 ATOX1O00244 68 aa6.14□□□□□ -1.43
PABPN1-203ENST00000553960 HERC2O95714 4834 aa6.14□□□□□ -1.43
PABPN1-203ENST00000553960 FAT3Q8TDW7 4589 aa6.13□□□□□ -1.43
PABPN1-203ENST00000553960 HCG22E2RYF7 251 aa6.13□□□□□ -1.43
PABPN1-203ENST00000553960 KRTAP4-5Q9BYR2 181 aa6.13□□□□□ -1.43
PABPN1-203ENST00000553960 LRP1Q07954 4544 aaKnown RBP6.13□□□□□ -1.43
PABPN1-203ENST00000553960 FAM236AA0A1B0GUQ0 79 aa6.12□□□□□ -1.43
PABPN1-203ENST00000553960 FAM236BA0A1B0GV22 79 aa6.12□□□□□ -1.43
PABPN1-203ENST00000553960 A0A087WVE0 104 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 MMP24-AS1A0A0U1RRL7 71 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 Q8N9L7 120 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
PABPN1-203ENST00000553960 OCR1Q9BZK8 76 aa6.09□□□□□ -1.43
PABPN1-203ENST00000553960 MYCBP2O75592 4640 aa6.09□□□□□ -1.43
PABPN1-203ENST00000553960 Q8N9P0 234 aaPredicted RBP6.08□□□□□ -1.44
PABPN1-203ENST00000553960 TRAV7A0A075B6U4 112 aa6.07□□□□□ -1.44
PABPN1-203ENST00000553960 hDV103S1A0JD37 113 aa6.07□□□□□ -1.44
PABPN1-203ENST00000553960 LINC00313P59037 77 aa6.07□□□□□ -1.44
PABPN1-203ENST00000553960 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
PABPN1-203ENST00000553960 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
PABPN1-203ENST00000553960 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
PABPN1-203ENST00000553960 SERP2Q8N6R1 65 aa6.06□□□□□ -1.44
PABPN1-203ENST00000553960 MRPL34Q9BQ48 92 aaKnown RBP6.05□□□□□ -1.44
PABPN1-203ENST00000553960 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
PABPN1-203ENST00000553960 UQCRQO14949 82 aa6.03□□□□□ -1.44
PABPN1-203ENST00000553960 COX7CP15954 63 aa6.02□□□□□ -1.45
PABPN1-203ENST00000553960 NOTCH2NLQ7Z3S9 236 aa6.02□□□□□ -1.45
PABPN1-203ENST00000553960 H3BPC8 53 aa6.01□□□□□ -1.45
PABPN1-203ENST00000553960 C5orf47Q569G3 176 aa6.01□□□□□ -1.45
PABPN1-203ENST00000553960 C20orf166-AS1Q96NR2 134 aa6.01□□□□□ -1.45
PABPN1-203ENST00000553960 ANAPC13Q9BS18 74 aa6.01□□□□□ -1.45
PABPN1-203ENST00000553960 A8MUU9 505 aa5.99□□□□□ -1.45
PABPN1-203ENST00000553960 TPRXLQ17RH7 258 aa5.99□□□□□ -1.45
PABPN1-203ENST00000553960 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
PABPN1-203ENST00000553960 WFDC13Q8IUB5 93 aa5.98□□□□□ -1.45
PABPN1-203ENST00000553960 PCP4P48539 62 aa5.97□□□□□ -1.45
PABPN1-203ENST00000553960 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
PABPN1-203ENST00000553960 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
PABPN1-203ENST00000553960 Q75L30 129 aa5.96□□□□□ -1.46
PABPN1-203ENST00000553960 ABCA13Q86UQ4 5058 aa5.95□□□□□ -1.46
PABPN1-203ENST00000553960 TRAV22A0A0B4J277 110 aa5.93□□□□□ -1.46
PABPN1-203ENST00000553960 ZCCHC13Q8WW36 166 aaKnown RBP5.93□□□□□ -1.46
PABPN1-203ENST00000553960 RETNLBQ9BQ08 111 aa5.92□□□□□ -1.46
PABPN1-203ENST00000553960 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
PABPN1-203ENST00000553960 NDUFC1O43677 76 aa5.91□□□□□ -1.46
PABPN1-203ENST00000553960 XP32Q5T750 250 aa5.91□□□□□ -1.46
PABPN1-203ENST00000553960 MP68P56378 58 aa5.9□□□□□ -1.46
PABPN1-203ENST00000553960 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
PABPN1-203ENST00000553960 H0Y9P7 68 aa5.86□□□□□ -1.47
PABPN1-203ENST00000553960 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
PABPN1-203ENST00000553960 Q5W150 140 aa5.86□□□□□ -1.47
PABPN1-203ENST00000553960 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
PABPN1-203ENST00000553960 NDUFS5O43920 106 aa5.85□□□□□ -1.47
PABPN1-203ENST00000553960 C20orf197Q8N268 126 aa5.84□□□□□ -1.47
PABPN1-203ENST00000553960 C9orf92A6NGG3 77 aa5.83□□□□□ -1.48
PABPN1-203ENST00000553960 PRR4Q16378 134 aa5.83□□□□□ -1.48
PABPN1-203ENST00000553960 H7BZZ5 65 aa5.82□□□□□ -1.48
PABPN1-203ENST00000553960 C1orf64Q8NEQ6 169 aa5.82□□□□□ -1.48
PABPN1-203ENST00000553960 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
PABPN1-203ENST00000553960 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
PABPN1-203ENST00000553960 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
PABPN1-203ENST00000553960 CYP4F30PQ9H0H9 118 aa5.81□□□□□ -1.48
PABPN1-203ENST00000553960 PCLOQ9Y6V0 5065 aa5.79□□□□□ -1.48
PABPN1-203ENST00000553960 TMEM258P61165 79 aa5.78□□□□□ -1.48
PABPN1-203ENST00000553960 ATP11AUNQ6ZP68 121 aa5.78□□□□□ -1.48
PABPN1-203ENST00000553960 ATP5EP56381 51 aaPredicted RBP5.77□□□□□ -1.49
PABPN1-203ENST00000553960 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
PABPN1-203ENST00000553960 SNURFQ9Y675 71 aa5.76□□□□□ -1.49
PABPN1-203ENST00000553960 CYSTM1Q9H1C7 97 aa5.75□□□□□ -1.49
PABPN1-203ENST00000553960 SEC61BP60468 96 aaKnown RBP5.73□□□□□ -1.49
PABPN1-203ENST00000553960 LCE2BO14633 110 aa5.71□□□□□ -1.5
PABPN1-203ENST00000553960 SPINK7P58062 85 aa5.7□□□□□ -1.5
PABPN1-203ENST00000553960 A8MUN3 132 aa5.68□□□□□ -1.5
PABPN1-203ENST00000553960 LRP2P98164 4655 aa5.68□□□□□ -1.5
PABPN1-203ENST00000553960 MPLKIPQ8TAP9 179 aa5.67□□□□□ -1.5
PABPN1-203ENST00000553960 IGKV2D-30A0A075B6S6 120 aa5.65□□□□□ -1.5
PABPN1-203ENST00000553960 HRES1P13985 223 aa5.65□□□□□ -1.5
PABPN1-203ENST00000553960 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
PABPN1-203ENST00000553960 PCOTHQ58A44 107 aa5.65□□□□□ -1.5
PABPN1-203ENST00000553960 DMAC1Q96GE9 116 aa5.65□□□□□ -1.5
PABPN1-203ENST00000553960 HERC1Q15751 4861 aa5.65□□□□□ -1.51
PABPN1-203ENST00000553960 FAM236DA0A1B0GTK5 79 aa5.64□□□□□ -1.51
PABPN1-203ENST00000553960 FAM236CP0DP71 79 aa5.64□□□□□ -1.51
PABPN1-203ENST00000553960 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
PABPN1-203ENST00000553960 COX6B2Q6YFQ2 88 aa5.6□□□□□ -1.51
PABPN1-203ENST00000553960 LPAP08519 4548 aa5.59□□□□□ -1.51
PABPN1-203ENST00000553960 ACYP2P14621 99 aa5.58□□□□□ -1.52
PABPN1-203ENST00000553960 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
PABPN1-203ENST00000553960 MUC17Q685J3 4493 aa5.56□□□□□ -1.52
PABPN1-203ENST00000553960 KRTAP3-1Q9BYR8 98 aa5.55□□□□□ -1.52
PABPN1-203ENST00000553960 C4orf26Q17RF5 130 aa5.53□□□□□ -1.52
PABPN1-203ENST00000553960 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
PABPN1-203ENST00000553960 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
PABPN1-203ENST00000553960 KRTAP19-2Q3LHN2 52 aa5.5□□□□□ -1.53
PABPN1-203ENST00000553960 COA5Q86WW8 74 aa5.48□□□□□ -1.53
PABPN1-203ENST00000553960 H1FX-AS1Q4G0G2 97 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms