RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 DSCR10P59022 87 aa8.09□□□□□ -1.11
SHMT2-210ENST00000553950 TPRXLQ17RH7 258 aa8.09□□□□□ -1.11
SHMT2-210ENST00000553950 PRR15Q8IV56 129 aa8.09□□□□□ -1.11
SHMT2-210ENST00000553950 CDIP1Q9H305 208 aa8.09□□□□□ -1.11
SHMT2-210ENST00000553950 IGHV6-1A0A0B4J1U7 121 aa8.07□□□□□ -1.12
SHMT2-210ENST00000553950 IGKV3D-7A0A0C4DH55 119 aa8.07□□□□□ -1.12
SHMT2-210ENST00000553950 K7EQZ3 153 aa8.07□□□□□ -1.12
SHMT2-210ENST00000553950 LINC00313P59037 77 aa8.04□□□□□ -1.12
SHMT2-210ENST00000553950 KRTAP13-3Q3SY46 172 aa8.03□□□□□ -1.12
SHMT2-210ENST00000553950 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
SHMT2-210ENST00000553950 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
SHMT2-210ENST00000553950 Q8N9L7 120 aa8.01□□□□□ -1.13
SHMT2-210ENST00000553950 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
SHMT2-210ENST00000553950 MMP24-AS1A0A0U1RRL7 71 aa7.99□□□□□ -1.13
SHMT2-210ENST00000553950 C9orf92A6NGG3 77 aa7.99□□□□□ -1.13
SHMT2-210ENST00000553950 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
SHMT2-210ENST00000553950 hDV103S1A0JD37 113 aa7.97□□□□□ -1.13
SHMT2-210ENST00000553950 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
SHMT2-210ENST00000553950 CASC2Q6XLA1 102 aa7.96□□□□□ -1.14
SHMT2-210ENST00000553950 MT-ATP8P03928 68 aa7.94□□□□□ -1.14
SHMT2-210ENST00000553950 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
SHMT2-210ENST00000553950 XP32Q5T750 250 aa7.93□□□□□ -1.14
SHMT2-210ENST00000553950 HERC1Q15751 4861 aa7.92□□□□□ -1.14
SHMT2-210ENST00000553950 KRTAP16-1A8MUX0 517 aa7.92□□□□□ -1.14
SHMT2-210ENST00000553950 NOTCH2NLQ7Z3S9 236 aa7.92□□□□□ -1.14
SHMT2-210ENST00000553950 WFDC13Q8IUB5 93 aa7.92□□□□□ -1.14
SHMT2-210ENST00000553950 Q75L30 129 aa7.91□□□□□ -1.14
SHMT2-210ENST00000553950 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
SHMT2-210ENST00000553950 A0A087WVE0 104 aa7.89□□□□□ -1.15
SHMT2-210ENST00000553950 Q8N9P0 234 aaPredicted RBP7.89□□□□□ -1.15
SHMT2-210ENST00000553950 A8MUU9 505 aa7.88□□□□□ -1.15
SHMT2-210ENST00000553950 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
SHMT2-210ENST00000553950 HMCN2Q8NDA2 5059 aa7.87□□□□□ -1.15
SHMT2-210ENST00000553950 NDUFS5O43920 106 aa7.86□□□□□ -1.15
SHMT2-210ENST00000553950 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
SHMT2-210ENST00000553950 SEC61BP60468 96 aaKnown RBP7.84□□□□□ -1.15
SHMT2-210ENST00000553950 FAM236AA0A1B0GUQ0 79 aa7.82□□□□□ -1.16
SHMT2-210ENST00000553950 FAM236BA0A1B0GV22 79 aa7.82□□□□□ -1.16
SHMT2-210ENST00000553950 SCGB1A1P11684 91 aa7.82□□□□□ -1.16
SHMT2-210ENST00000553950 ATP11AUNQ6ZP68 121 aa7.82□□□□□ -1.16
SHMT2-210ENST00000553950 SMIM20Q8N5G0 67 aa7.79□□□□□ -1.16
SHMT2-210ENST00000553950 ZCCHC13Q8WW36 166 aaKnown RBP7.78□□□□□ -1.16
SHMT2-210ENST00000553950 LPAP08519 4548 aa7.77□□□□□ -1.17
SHMT2-210ENST00000553950 ATOX1O00244 68 aa7.77□□□□□ -1.17
SHMT2-210ENST00000553950 UQCRQO14949 82 aa7.76□□□□□ -1.17
SHMT2-210ENST00000553950 TRAV22A0A0B4J277 110 aa7.72□□□□□ -1.17
SHMT2-210ENST00000553950 OCR1Q9BZK8 76 aa7.72□□□□□ -1.17
SHMT2-210ENST00000553950 LRP2P98164 4655 aa7.72□□□□□ -1.17
SHMT2-210ENST00000553950 PCOTHQ58A44 107 aa7.71□□□□□ -1.18
SHMT2-210ENST00000553950 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
SHMT2-210ENST00000553950 MP68P56378 58 aa7.67□□□□□ -1.18
SHMT2-210ENST00000553950 C5orf47Q569G3 176 aa7.66□□□□□ -1.18
SHMT2-210ENST00000553950 H0Y9P7 68 aa7.65□□□□□ -1.18
SHMT2-210ENST00000553950 H3BPC8 53 aa7.65□□□□□ -1.18
SHMT2-210ENST00000553950 MUC17Q685J3 4493 aa7.65□□□□□ -1.19
SHMT2-210ENST00000553950 Q5W150 140 aa7.64□□□□□ -1.19
SHMT2-210ENST00000553950 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
SHMT2-210ENST00000553950 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
SHMT2-210ENST00000553950 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
SHMT2-210ENST00000553950 IGKV2-30P06310 120 aa7.59□□□□□ -1.19
SHMT2-210ENST00000553950 IGKV2D-30A0A075B6S6 120 aa7.58□□□□□ -1.2
SHMT2-210ENST00000553950 SPINK7P58062 85 aa7.57□□□□□ -1.2
SHMT2-210ENST00000553950 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
SHMT2-210ENST00000553950 C1orf64Q8NEQ6 169 aa7.56□□□□□ -1.2
SHMT2-210ENST00000553950 LINC00208Q96KT6 92 aa7.55□□□□□ -1.2
SHMT2-210ENST00000553950 UBR4Q5T4S7 5183 aa7.54□□□□□ -1.2
SHMT2-210ENST00000553950 COX7CP15954 63 aa7.53□□□□□ -1.2
SHMT2-210ENST00000553950 CYP4F30PQ9H0H9 118 aa7.51□□□□□ -1.21
SHMT2-210ENST00000553950 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
SHMT2-210ENST00000553950 A0A0U1RQV1 116 aa7.48□□□□□ -1.21
SHMT2-210ENST00000553950 C20orf197Q8N268 126 aa7.48□□□□□ -1.21
SHMT2-210ENST00000553950 KRTAP4-1Q9BYQ7 146 aa7.47□□□□□ -1.21
SHMT2-210ENST00000553950 HRES1P13985 223 aa7.46□□□□□ -1.22
SHMT2-210ENST00000553950 KLKP1Q107X0 134 aa7.46□□□□□ -1.22
SHMT2-210ENST00000553950 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
SHMT2-210ENST00000553950 NDUFC1O43677 76 aa7.42□□□□□ -1.22
SHMT2-210ENST00000553950 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
SHMT2-210ENST00000553950 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
SHMT2-210ENST00000553950 MPLKIPQ8TAP9 179 aa7.41□□□□□ -1.22
SHMT2-210ENST00000553950 SNURFQ9Y675 71 aa7.41□□□□□ -1.22
SHMT2-210ENST00000553950 COX6B2Q6YFQ2 88 aa7.38□□□□□ -1.23
SHMT2-210ENST00000553950 C4orf26Q17RF5 130 aa7.36□□□□□ -1.23
SHMT2-210ENST00000553950 A8MUN3 132 aa7.35□□□□□ -1.23
SHMT2-210ENST00000553950 MUC2Q02817 5179 aa7.33□□□□□ -1.24
SHMT2-210ENST00000553950 SPANXA2-OT1Q8N9U9 137 aa7.33□□□□□ -1.24
SHMT2-210ENST00000553950 CCDC179H3BU77 68 aa7.31□□□□□ -1.24
SHMT2-210ENST00000553950 H7BZZ5 65 aa7.27□□□□□ -1.25
SHMT2-210ENST00000553950 H1FX-AS1Q4G0G2 97 aa7.27□□□□□ -1.25
SHMT2-210ENST00000553950 DMAC1Q96GE9 116 aa7.27□□□□□ -1.25
SHMT2-210ENST00000553950 KRTAP19-2Q3LHN2 52 aa7.26□□□□□ -1.25
SHMT2-210ENST00000553950 ATP5EP56381 51 aaPredicted RBP7.24□□□□□ -1.25
SHMT2-210ENST00000553950 PCP4P48539 62 aa7.23□□□□□ -1.25
SHMT2-210ENST00000553950 CYSTM1Q9H1C7 97 aa7.21□□□□□ -1.26
SHMT2-210ENST00000553950 ACYP2P14621 99 aa7.2□□□□□ -1.26
SHMT2-210ENST00000553950 TMEM258P61165 79 aa7.2□□□□□ -1.26
SHMT2-210ENST00000553950 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
SHMT2-210ENST00000553950 LCE2CQ5TA81 110 aa7.19□□□□□ -1.26
SHMT2-210ENST00000553950 S4R3F8 94 aa7.18□□□□□ -1.26
SHMT2-210ENST00000553950 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.27
SHMT2-210ENST00000553950 FLGP20930 4061 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms