RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 SNCGO76070 127 aa6.72□□□□□ -1.33
NEDD1-205ENST00000553609 ZCCHC13Q8WW36 166 aaKnown RBP6.72□□□□□ -1.33
NEDD1-205ENST00000553609 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
NEDD1-205ENST00000553609 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
NEDD1-205ENST00000553609 A0A1B0GX51 115 aa6.7□□□□□ -1.34
NEDD1-205ENST00000553609 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
NEDD1-205ENST00000553609 ANKRD29Q8N6D5 301 aa6.69□□□□□ -1.34
NEDD1-205ENST00000553609 RAB37Q96AX2 223 aa6.68□□□□□ -1.34
NEDD1-205ENST00000553609 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
NEDD1-205ENST00000553609 C8orf87E5RJ46 101 aa6.67□□□□□ -1.34
NEDD1-205ENST00000553609 COX8AP10176 69 aa6.67□□□□□ -1.34
NEDD1-205ENST00000553609 A0A1B0GV72 72 aa6.66□□□□□ -1.34
NEDD1-205ENST00000553609 WFDC13Q8IUB5 93 aa6.66□□□□□ -1.34
NEDD1-205ENST00000553609 DLEU1O43261 78 aa6.65□□□□□ -1.34
NEDD1-205ENST00000553609 CCKP06307 115 aa6.64□□□□□ -1.35
NEDD1-205ENST00000553609 TRACP01848 142 aa6.63□□□□□ -1.35
NEDD1-205ENST00000553609 TRIAP1O43715 76 aa6.62□□□□□ -1.35
NEDD1-205ENST00000553609 HIGD1BQ9P298 99 aa6.61□□□□□ -1.35
NEDD1-205ENST00000553609 S100A2P29034 98 aa6.6□□□□□ -1.35
NEDD1-205ENST00000553609 C2orf91Q6ZV80 131 aa6.6□□□□□ -1.35
NEDD1-205ENST00000553609 ORMDL1Q9P0S3 153 aa6.59□□□□□ -1.35
NEDD1-205ENST00000553609 PRO1854Q9UHT4 67 aa6.59□□□□□ -1.35
NEDD1-205ENST00000553609 KRTAP20-1Q3LI63 56 aa6.58□□□□□ -1.36
NEDD1-205ENST00000553609 C14orf144Q96I85 54 aa6.58□□□□□ -1.36
NEDD1-205ENST00000553609 H3BQ85 93 aa6.55□□□□□ -1.36
NEDD1-205ENST00000553609 TMEM256-PLSCR3K7ERE1 68 aa6.55□□□□□ -1.36
NEDD1-205ENST00000553609 DNAL4O96015 105 aa6.55□□□□□ -1.36
NEDD1-205ENST00000553609 CEND1Q8N111 149 aa6.55□□□□□ -1.36
NEDD1-205ENST00000553609 FXYD2P54710 66 aa6.54□□□□□ -1.36
NEDD1-205ENST00000553609 H1FX-AS1Q4G0G2 97 aa6.53□□□□□ -1.36
NEDD1-205ENST00000553609 MDN1Q9NU22 5596 aa6.53□□□□□ -1.36
NEDD1-205ENST00000553609 KMT2DO14686 5537 aa6.52□□□□□ -1.37
NEDD1-205ENST00000553609 J3KT08 172 aa6.52□□□□□ -1.37
NEDD1-205ENST00000553609 UBE2V1Q13404 147 aa6.52□□□□□ -1.37
NEDD1-205ENST00000553609 VPS25Q9BRG1 176 aa6.51□□□□□ -1.37
NEDD1-205ENST00000553609 A6NN06 94 aa6.5□□□□□ -1.37
NEDD1-205ENST00000553609 MT1BP07438 61 aa6.5□□□□□ -1.37
NEDD1-205ENST00000553609 C8orf17Q9NRJ1 99 aa6.5□□□□□ -1.37
NEDD1-205ENST00000553609 PAM16Q9Y3D7 125 aa6.49□□□□□ -1.37
NEDD1-205ENST00000553609 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
NEDD1-205ENST00000553609 SPATA45Q537H7 98 aa6.48□□□□□ -1.37
NEDD1-205ENST00000553609 Q6ZQT0 140 aa6.48□□□□□ -1.37
NEDD1-205ENST00000553609 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
NEDD1-205ENST00000553609 K7ERJ3 54 aa6.46□□□□□ -1.38
NEDD1-205ENST00000553609 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
NEDD1-205ENST00000553609 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.38
NEDD1-205ENST00000553609 NDUFB1O75438 58 aa6.45□□□□□ -1.38
NEDD1-205ENST00000553609 S100A6P06703 90 aa6.44□□□□□ -1.38
NEDD1-205ENST00000553609 PSMB2P49721 201 aa6.44□□□□□ -1.38
NEDD1-205ENST00000553609 Q6ZVQ6 151 aa6.44□□□□□ -1.38
NEDD1-205ENST00000553609 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
NEDD1-205ENST00000553609 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
NEDD1-205ENST00000553609 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
NEDD1-205ENST00000553609 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
NEDD1-205ENST00000553609 COX6CP09669 75 aa6.4□□□□□ -1.38
NEDD1-205ENST00000553609 VAMP8Q9BV40 100 aa6.4□□□□□ -1.38
NEDD1-205ENST00000553609 C9JAW5 83 aa6.39□□□□□ -1.39
NEDD1-205ENST00000553609 Q5VV11 94 aa6.39□□□□□ -1.39
NEDD1-205ENST00000553609 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
NEDD1-205ENST00000553609 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
NEDD1-205ENST00000553609 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
NEDD1-205ENST00000553609 TMEM254Q8TBM7 123 aa6.36□□□□□ -1.39
NEDD1-205ENST00000553609 HSD52Q0P140 79 aa6.35□□□□□ -1.39
NEDD1-205ENST00000553609 MRPL34Q9BQ48 92 aaKnown RBP6.35□□□□□ -1.39
NEDD1-205ENST00000553609 KRTAP5-3Q6L8H2 238 aa6.34□□□□□ -1.39
NEDD1-205ENST00000553609 IGKV2D-30A0A075B6S6 120 aa6.32□□□□□ -1.4
NEDD1-205ENST00000553609 A0A1B0GW54 56 aa6.32□□□□□ -1.4
NEDD1-205ENST00000553609 IGKV2-30P06310 120 aa6.32□□□□□ -1.4
NEDD1-205ENST00000553609 BAALC-AS2P0C853 105 aa6.32□□□□□ -1.4
NEDD1-205ENST00000553609 Q5W150 140 aa6.31□□□□□ -1.4
NEDD1-205ENST00000553609 LOC110117498A0A087WWA1 95 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 FAM236AA0A1B0GUQ0 79 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 FAM236BA0A1B0GV22 79 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 S100A1P23297 94 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 C5orf47Q569G3 176 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 C7orf65Q6ZTY9 151 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
NEDD1-205ENST00000553609 C4orf26Q17RF5 130 aa6.28□□□□□ -1.4
NEDD1-205ENST00000553609 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
NEDD1-205ENST00000553609 SCGB1C2P0DMR2 95 aa6.27□□□□□ -1.41
NEDD1-205ENST00000553609 K7EQZ3 153 aa6.25□□□□□ -1.41
NEDD1-205ENST00000553609 NDUFS5O43920 106 aa6.25□□□□□ -1.41
NEDD1-205ENST00000553609 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
NEDD1-205ENST00000553609 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
NEDD1-205ENST00000553609 PDE6GP18545 87 aa6.22□□□□□ -1.41
NEDD1-205ENST00000553609 NREPQ16612 68 aa6.22□□□□□ -1.41
NEDD1-205ENST00000553609 C14orf132Q9NPU4 83 aa6.22□□□□□ -1.41
NEDD1-205ENST00000553609 PYY3Q5JQD4 70 aa6.19□□□□□ -1.42
NEDD1-205ENST00000553609 KLKP1Q107X0 134 aa6.18□□□□□ -1.42
NEDD1-205ENST00000553609 S4R3F8 94 aa6.18□□□□□ -1.42
NEDD1-205ENST00000553609 CSAG1Q6PB30 78 aa6.17□□□□□ -1.42
NEDD1-205ENST00000553609 LCA10Q71F78 164 aa6.17□□□□□ -1.42
NEDD1-205ENST00000553609 ATXN8Q156A1 80 aa6.16□□□□□ -1.42
NEDD1-205ENST00000553609 SPRR2EP22531 72 aa6.14□□□□□ -1.43
NEDD1-205ENST00000553609 SPRR2BP35325 72 aa6.14□□□□□ -1.43
NEDD1-205ENST00000553609 SPRR2AP35326 72 aa6.14□□□□□ -1.43
NEDD1-205ENST00000553609 SPRR2FQ96RM1 72 aa6.14□□□□□ -1.43
NEDD1-205ENST00000553609 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
NEDD1-205ENST00000553609 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms