RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
PRPF39-204ENST00000553605 LYRM7Q5U5X0 104 aa6.11□□□□□ -1.43
PRPF39-204ENST00000553605 FABP2P12104 132 aa6.1□□□□□ -1.43
PRPF39-204ENST00000553605 IMUPQ9GZP8 106 aa6.1□□□□□ -1.43
PRPF39-204ENST00000553605 SPRR2DP22532 72 aa6.09□□□□□ -1.43
PRPF39-204ENST00000553605 ANKRD29Q8N6D5 301 aa6.08□□□□□ -1.44
PRPF39-204ENST00000553605 LCE1DQ5T752 114 aa6.05□□□□□ -1.44
PRPF39-204ENST00000553605 ATOH7Q8N100 152 aa6.05□□□□□ -1.44
PRPF39-204ENST00000553605 DSCR8Q96T75 97 aa6.05□□□□□ -1.44
PRPF39-204ENST00000553605 IGKV3D-7A0A0C4DH55 119 aa6.04□□□□□ -1.44
PRPF39-204ENST00000553605 KRTDAPP60985 99 aa6.04□□□□□ -1.44
PRPF39-204ENST00000553605 H0YGX0 51 aa6.03□□□□□ -1.44
PRPF39-204ENST00000553605 TRACP01848 142 aa6.03□□□□□ -1.44
PRPF39-204ENST00000553605 CCKP06307 115 aa6.01□□□□□ -1.45
PRPF39-204ENST00000553605 A0A1B0GV72 72 aa6□□□□□ -1.45
PRPF39-204ENST00000553605 C5orf47Q569G3 176 aa6□□□□□ -1.45
PRPF39-204ENST00000553605 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
PRPF39-204ENST00000553605 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
PRPF39-204ENST00000553605 TMA7Q9Y2S6 64 aaKnown RBP5.99□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BKO60814 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BJP06899 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BOP23527 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BBP33778 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BDP58876 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BCP62807 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST2H2BEQ16778 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 KRTAP19-4Q3LI73 84 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BHQ93079 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BNQ99877 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 HIST1H2BMQ99879 126 aa5.97□□□□□ -1.45
PRPF39-204ENST00000553605 A0A1B0GX51 115 aa5.96□□□□□ -1.46
PRPF39-204ENST00000553605 J3KT08 172 aa5.96□□□□□ -1.46
PRPF39-204ENST00000553605 NDUFB1O75438 58 aa5.94□□□□□ -1.46
PRPF39-204ENST00000553605 SNRPEP62304 92 aaKnown RBP5.94□□□□□ -1.46
PRPF39-204ENST00000553605 C8orf17Q9NRJ1 99 aa5.94□□□□□ -1.46
PRPF39-204ENST00000553605 KLKP1Q107X0 134 aa5.92□□□□□ -1.46
PRPF39-204ENST00000553605 HIST1H4GQ99525 98 aa5.92□□□□□ -1.46
PRPF39-204ENST00000553605 VPS25Q9BRG1 176 aa5.91□□□□□ -1.46
PRPF39-204ENST00000553605 Q6ZVQ6 151 aa5.9□□□□□ -1.46
PRPF39-204ENST00000553605 CSAG1Q6PB30 78 aa5.88□□□□□ -1.47
PRPF39-204ENST00000553605 C2orf91Q6ZV80 131 aa5.88□□□□□ -1.47
PRPF39-204ENST00000553605 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
PRPF39-204ENST00000553605 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
PRPF39-204ENST00000553605 ORMDL1Q9P0S3 153 aa5.87□□□□□ -1.47
PRPF39-204ENST00000553605 H3BQ85 93 aa5.86□□□□□ -1.47
PRPF39-204ENST00000553605 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
PRPF39-204ENST00000553605 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
PRPF39-204ENST00000553605 C4orf26Q17RF5 130 aa5.85□□□□□ -1.47
PRPF39-204ENST00000553605 DNAL4O96015 105 aa5.84□□□□□ -1.47
PRPF39-204ENST00000553605 A0A0B4J2C4 111 aa5.83□□□□□ -1.48
PRPF39-204ENST00000553605 C7orf65Q6ZTY9 151 aa5.83□□□□□ -1.48
PRPF39-204ENST00000553605 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
PRPF39-204ENST00000553605 HSBP1L1C9JCN9 74 aa5.82□□□□□ -1.48
PRPF39-204ENST00000553605 COA6Q5JTJ3 125 aaKnown RBP5.82□□□□□ -1.48
PRPF39-204ENST00000553605 S4R3F8 94 aa5.82□□□□□ -1.48
PRPF39-204ENST00000553605 MRPL34Q9BQ48 92 aaKnown RBP5.81□□□□□ -1.48
PRPF39-204ENST00000553605 C21orf62-AS1Q17RA5 79 aa5.8□□□□□ -1.48
PRPF39-204ENST00000553605 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
PRPF39-204ENST00000553605 Q6ZQT0 140 aa5.8□□□□□ -1.48
PRPF39-204ENST00000553605 PRR15Q8IV56 129 aa5.8□□□□□ -1.48
PRPF39-204ENST00000553605 H3BS24 57 aa5.79□□□□□ -1.48
PRPF39-204ENST00000553605 RBM3P98179 157 aaKnown RBP5.79□□□□□ -1.48
PRPF39-204ENST00000553605 UBE2V1Q13404 147 aa5.79□□□□□ -1.48
PRPF39-204ENST00000553605 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
PRPF39-204ENST00000553605 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
PRPF39-204ENST00000553605 NDUFS5O43920 106 aa5.78□□□□□ -1.48
PRPF39-204ENST00000553605 LCA10Q71F78 164 aa5.78□□□□□ -1.48
PRPF39-204ENST00000553605 TMEM254Q8TBM7 123 aa5.78□□□□□ -1.48
PRPF39-204ENST00000553605 TRIAP1O43715 76 aa5.77□□□□□ -1.49
PRPF39-204ENST00000553605 MT1XP80297 61 aa5.77□□□□□ -1.49
PRPF39-204ENST00000553605 KRTAP12-2P59991 146 aa5.76□□□□□ -1.49
PRPF39-204ENST00000553605 PRO1854Q9UHT4 67 aa5.76□□□□□ -1.49
PRPF39-204ENST00000553605 Q5W150 140 aa5.75□□□□□ -1.49
PRPF39-204ENST00000553605 KRTAP3-1Q9BYR8 98 aa5.75□□□□□ -1.49
PRPF39-204ENST00000553605 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
PRPF39-204ENST00000553605 C9JAW5 83 aa5.71□□□□□ -1.5
PRPF39-204ENST00000553605 COX8AP10176 69 aa5.71□□□□□ -1.5
PRPF39-204ENST00000553605 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
PRPF39-204ENST00000553605 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
PRPF39-204ENST00000553605 DLEU1O43261 78 aa5.67□□□□□ -1.5
PRPF39-204ENST00000553605 CEND1Q8N111 149 aa5.66□□□□□ -1.5
PRPF39-204ENST00000553605 PSMB2P49721 201 aa5.65□□□□□ -1.5
PRPF39-204ENST00000553605 C1orf64Q8NEQ6 169 aa5.65□□□□□ -1.5
PRPF39-204ENST00000553605 KRTAP4-11Q9BYQ6 195 aa5.65□□□□□ -1.5
PRPF39-204ENST00000553605 K7EQZ3 153 aa5.64□□□□□ -1.51
PRPF39-204ENST00000553605 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
PRPF39-204ENST00000553605 HIGD1BQ9P298 99 aa5.64□□□□□ -1.51
PRPF39-204ENST00000553605 A0A1B0GW54 56 aa5.62□□□□□ -1.51
PRPF39-204ENST00000553605 COX6CP09669 75 aa5.62□□□□□ -1.51
PRPF39-204ENST00000553605 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
PRPF39-204ENST00000553605 C14orf144Q96I85 54 aa5.61□□□□□ -1.51
PRPF39-204ENST00000553605 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
PRPF39-204ENST00000553605 FXYD2P54710 66 aa5.59□□□□□ -1.51
PRPF39-204ENST00000553605 HIST1H2BLQ99880 126 aa5.59□□□□□ -1.51
PRPF39-204ENST00000553605 NREPQ16612 68 aa5.58□□□□□ -1.52
PRPF39-204ENST00000553605 S100A2P29034 98 aa5.56□□□□□ -1.52
PRPF39-204ENST00000553605 A8MUN3 132 aa5.55□□□□□ -1.52
PRPF39-204ENST00000553605 BAALC-AS2P0C853 105 aa5.55□□□□□ -1.52
PRPF39-204ENST00000553605 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms