RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 C14orf132Q9NPU4 83 aa9.7□□□□□ -0.86
HDAC4-217ENST00000553145 A0A1B0GVX0 72 aa9.69□□□□□ -0.86
HDAC4-217ENST00000553145 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
HDAC4-217ENST00000553145 A0A1W2PPM0 123 aa9.67□□□□□ -0.86
HDAC4-217ENST00000553145 FLGP20930 4061 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-217ENST00000553145 C8orf87E5RJ46 101 aa9.65□□□□□ -0.86
HDAC4-217ENST00000553145 J3KT08 172 aa9.65□□□□□ -0.86
HDAC4-217ENST00000553145 PDE6GP18545 87 aa9.65□□□□□ -0.86
HDAC4-217ENST00000553145 MTURNQ8N3F0 131 aa9.65□□□□□ -0.86
HDAC4-217ENST00000553145 A0A1B0GW54 56 aa9.63□□□□□ -0.87
HDAC4-217ENST00000553145 KRTAP10-6P60371 365 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-217ENST00000553145 H3BT86 120 aa9.61□□□□□ -0.87
HDAC4-217ENST00000553145 M0R2T5 61 aa9.61□□□□□ -0.87
HDAC4-217ENST00000553145 LORP23490 312 aaPredicted RBP9.61□□□□□ -0.87
HDAC4-217ENST00000553145 LCE2DQ5TA82 110 aaPredicted RBP9.59□□□□□ -0.87
HDAC4-217ENST00000553145 IGKV3D-7A0A0C4DH55 119 aa9.56□□□□□ -0.88
HDAC4-217ENST00000553145 A8MWP4 228 aa9.56□□□□□ -0.88
HDAC4-217ENST00000553145 NDUFB1O75438 58 aa9.56□□□□□ -0.88
HDAC4-217ENST00000553145 C8orf17Q9NRJ1 99 aa9.54□□□□□ -0.88
HDAC4-217ENST00000553145 SPCS1Q9Y6A9 102 aa9.54□□□□□ -0.88
HDAC4-217ENST00000553145 NREPQ16612 68 aa9.53□□□□□ -0.88
HDAC4-217ENST00000553145 HRES1P13985 223 aa9.51□□□□□ -0.89
HDAC4-217ENST00000553145 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
HDAC4-217ENST00000553145 ZCCHC13Q8WW36 166 aaKnown RBP9.5□□□□□ -0.89
HDAC4-217ENST00000553145 SMCPP49901 116 aaPredicted RBP9.49□□□□□ -0.89
HDAC4-217ENST00000553145 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
HDAC4-217ENST00000553145 PRR15Q8IV56 129 aa9.48□□□□□ -0.89
HDAC4-217ENST00000553145 MPLKIPQ8TAP9 179 aa9.48□□□□□ -0.89
HDAC4-217ENST00000553145 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
HDAC4-217ENST00000553145 MMP24-AS1A0A0U1RRL7 71 aa9.44□□□□□ -0.9
HDAC4-217ENST00000553145 Q6ZVQ6 151 aa9.44□□□□□ -0.9
HDAC4-217ENST00000553145 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
HDAC4-217ENST00000553145 K7EQZ3 153 aa9.42□□□□□ -0.9
HDAC4-217ENST00000553145 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
HDAC4-217ENST00000553145 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
HDAC4-217ENST00000553145 K7EP34 96 aa9.4□□□□□ -0.9
HDAC4-217ENST00000553145 RBM12B-AS1Q9P1G2 102 aa9.4□□□□□ -0.9
HDAC4-217ENST00000553145 SPINK7P58062 85 aa9.39□□□□□ -0.91
HDAC4-217ENST00000553145 TMEM254Q8TBM7 123 aa9.38□□□□□ -0.91
HDAC4-217ENST00000553145 BPY2O14599 106 aa9.37□□□□□ -0.91
HDAC4-217ENST00000553145 MRPL34Q9BQ48 92 aaKnown RBP9.37□□□□□ -0.91
HDAC4-217ENST00000553145 hDV103S1A0JD37 113 aa9.34□□□□□ -0.91
HDAC4-217ENST00000553145 PCP4L1A6NKN8 68 aa9.34□□□□□ -0.91
HDAC4-217ENST00000553145 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
HDAC4-217ENST00000553145 Q8N9L7 120 aa9.32□□□□□ -0.92
HDAC4-217ENST00000553145 KRTAP9-8Q9BYQ0 159 aa9.32□□□□□ -0.92
HDAC4-217ENST00000553145 LINC00846Q9NV44 126 aa9.3□□□□□ -0.92
HDAC4-217ENST00000553145 CRCT1Q9UGL9 99 aa9.29□□□□□ -0.92
HDAC4-217ENST00000553145 NDUFS5O43920 106 aa9.27□□□□□ -0.93
HDAC4-217ENST00000553145 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
HDAC4-217ENST00000553145 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
HDAC4-217ENST00000553145 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
HDAC4-217ENST00000553145 UBL5Q9BZL1 73 aa9.23□□□□□ -0.93
HDAC4-217ENST00000553145 MT2AP02795 61 aa9.21□□□□□ -0.94
HDAC4-217ENST00000553145 Q5W150 140 aa9.21□□□□□ -0.94
HDAC4-217ENST00000553145 F8W1H4 67 aa9.19□□□□□ -0.94
HDAC4-217ENST00000553145 ETDBQ3ZM63 59 aa9.18□□□□□ -0.94
HDAC4-217ENST00000553145 HCG22E2RYF7 251 aa9.17□□□□□ -0.94
HDAC4-217ENST00000553145 MT1FP04733 61 aa9.15□□□□□ -0.94
HDAC4-217ENST00000553145 IGKV2D-30A0A075B6S6 120 aa9.13□□□□□ -0.95
HDAC4-217ENST00000553145 IGKV2-30P06310 120 aa9.13□□□□□ -0.95
HDAC4-217ENST00000553145 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
HDAC4-217ENST00000553145 CXCL6P80162 114 aa9.08□□□□□ -0.96
HDAC4-217ENST00000553145 USH2AO75445 5202 aa9.05□□□□□ -0.96
HDAC4-217ENST00000553145 KRTAP10-10P60014 251 aa9.05□□□□□ -0.96
HDAC4-217ENST00000553145 H1FX-AS1Q4G0G2 97 aa9.04□□□□□ -0.96
HDAC4-217ENST00000553145 KRTAP9-3Q9BYQ3 159 aa9.02□□□□□ -0.97
HDAC4-217ENST00000553145 LCE2BO14633 110 aa8.98□□□□□ -0.97
HDAC4-217ENST00000553145 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
HDAC4-217ENST00000553145 SSPOA2VEC9 5147 aa8.94□□□□□ -0.98
HDAC4-217ENST00000553145 ACYP1P07311 99 aa8.92□□□□□ -0.98
HDAC4-217ENST00000553145 TP53AIP1Q9HCN2 124 aa8.92□□□□□ -0.98
HDAC4-217ENST00000553145 FAM240AA0A1B0GVK7 77 aa8.9□□□□□ -0.98
HDAC4-217ENST00000553145 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
HDAC4-217ENST00000553145 A0A1B0GV90 55 aa8.85□□□□□ -0.99
HDAC4-217ENST00000553145 ATP5EP2Q5VTU8 51 aa8.84□□□□□ -0.99
HDAC4-217ENST00000553145 C1orf64Q8NEQ6 169 aa8.81□□□□□ -1
HDAC4-217ENST00000553145 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
HDAC4-217ENST00000553145 TRAV22A0A0B4J277 110 aa8.77□□□□□ -1.01
HDAC4-217ENST00000553145 KRTAP19-1Q8IUB9 90 aa8.77□□□□□ -1.01
HDAC4-217ENST00000553145 C5orf47Q569G3 176 aa8.76□□□□□ -1.01
HDAC4-217ENST00000553145 CYP4F30PQ9H0H9 118 aa8.76□□□□□ -1.01
HDAC4-217ENST00000553145 S4R3F8 94 aa8.75□□□□□ -1.01
HDAC4-217ENST00000553145 A0A087WVE0 104 aa8.73□□□□□ -1.01
HDAC4-217ENST00000553145 LINC00643Q86TS7 51 aa8.73□□□□□ -1.01
HDAC4-217ENST00000553145 FCGBPQ9Y6R7 5405 aaPredicted RBP8.71□□□□□ -1.01
HDAC4-217ENST00000553145 LCA10Q71F78 164 aa8.71□□□□□ -1.02
HDAC4-217ENST00000553145 LOC101927531A0A1B0GV80 90 aa8.7□□□□□ -1.02
HDAC4-217ENST00000553145 UQCRQO14949 82 aa8.68□□□□□ -1.02
HDAC4-217ENST00000553145 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
HDAC4-217ENST00000553145 H0Y9P7 68 aa8.66□□□□□ -1.02
HDAC4-217ENST00000553145 CSAG1Q6PB30 78 aa8.64□□□□□ -1.03
HDAC4-217ENST00000553145 KRTAP19-6Q3LI70 58 aa8.62□□□□□ -1.03
HDAC4-217ENST00000553145 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
HDAC4-217ENST00000553145 ATOX1O00244 68 aa8.61□□□□□ -1.03
HDAC4-217ENST00000553145 FAM236AA0A1B0GUQ0 79 aa8.59□□□□□ -1.03
HDAC4-217ENST00000553145 FAM236BA0A1B0GV22 79 aa8.59□□□□□ -1.03
HDAC4-217ENST00000553145 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
HDAC4-217ENST00000553145 J3QR89 54 aa8.53□□□□□ -1.04
HDAC4-217ENST00000553145 LINC00208Q96KT6 92 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1216 ms