RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 A0A0G2JQZ4 141 aa3.24□□□□□ -1.89
CCNT1-204ENST00000551989 PSPHP1O15172 72 aa3.24□□□□□ -1.89
CCNT1-204ENST00000551989 SSBP3-AS1Q7Z2R9 100 aa3.24□□□□□ -1.89
CCNT1-204ENST00000551989 Q8N9P0 234 aaPredicted RBP3.24□□□□□ -1.89
CCNT1-204ENST00000551989 RBM12B-AS1Q9P1G2 102 aa3.24□□□□□ -1.89
CCNT1-204ENST00000551989 OTOGQ6ZRI0 2925 aa3.23□□□□□ -1.89
CCNT1-204ENST00000551989 DNAH1Q9P2D7 4330 aa3.23□□□□□ -1.89
CCNT1-204ENST00000551989 RTL8CO15255 209 aa3.23□□□□□ -1.89
CCNT1-204ENST00000551989 COA5Q86WW8 74 aa3.23□□□□□ -1.89
CCNT1-204ENST00000551989 TENM3Q9P273 2699 aa3.23□□□□□ -1.89
CCNT1-204ENST00000551989 TENM1Q9UKZ4 2725 aa3.22□□□□□ -1.89
CCNT1-204ENST00000551989 PRR4Q16378 134 aa3.22□□□□□ -1.89
CCNT1-204ENST00000551989 Q5VV11 94 aa3.22□□□□□ -1.89
CCNT1-204ENST00000551989 PSORS1C2Q9UIG4 136 aa3.22□□□□□ -1.89
CCNT1-204ENST00000551989 LINC01558Q9Y6Z2 57 aa3.22□□□□□ -1.89
CCNT1-204ENST00000551989 A8MUN3 132 aa3.21□□□□□ -1.9
CCNT1-204ENST00000551989 PANO1I0J062 215 aa3.21□□□□□ -1.9
CCNT1-204ENST00000551989 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
CCNT1-204ENST00000551989 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
CCNT1-204ENST00000551989 IGLV7-43P04211 117 aa3.2□□□□□ -1.9
CCNT1-204ENST00000551989 TRRAPQ9Y4A5 3859 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 HECTD1Q9ULT8 2610 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 ATP11AUNQ6ZP68 121 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 CDC42SE1Q9NRR8 79 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
CCNT1-204ENST00000551989 HUWE1Q7Z6Z7 4374 aaKnown RBP3.18□□□□□ -1.9
CCNT1-204ENST00000551989 MAST4O15021 2626 aa3.18□□□□□ -1.9
CCNT1-204ENST00000551989 ACYP2P14621 99 aa3.18□□□□□ -1.9
CCNT1-204ENST00000551989 C1orf134Q5TEV5 83 aa3.18□□□□□ -1.9
CCNT1-204ENST00000551989 ANK2Q01484 3957 aa3.18□□□□□ -1.9
CCNT1-204ENST00000551989 KRTAP13-3Q3SY46 172 aa3.17□□□□□ -1.9
CCNT1-204ENST00000551989 PCOTHQ58A44 107 aa3.17□□□□□ -1.9
CCNT1-204ENST00000551989 BAHCC1Q9P281 2608 aa3.17□□□□□ -1.9
CCNT1-204ENST00000551989 A6NED7 52 aa3.16□□□□□ -1.9
CCNT1-204ENST00000551989 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
CCNT1-204ENST00000551989 HRES1P13985 223 aa3.15□□□□□ -1.91
CCNT1-204ENST00000551989 DMAC1Q96GE9 116 aa3.15□□□□□ -1.91
CCNT1-204ENST00000551989 FLNBO75369 2602 aaKnown RBP3.15□□□□□ -1.91
CCNT1-204ENST00000551989 LINC00313P59037 77 aa3.14□□□□□ -1.91
CCNT1-204ENST00000551989 LCA10Q71F78 164 aa3.14□□□□□ -1.91
CCNT1-204ENST00000551989 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
CCNT1-204ENST00000551989 PKD1L1Q8TDX9 2849 aa3.14□□□□□ -1.91
CCNT1-204ENST00000551989 STAB1Q9NY15 2570 aa3.13□□□□□ -1.91
CCNT1-204ENST00000551989 A0A087X002 238 aa3.13□□□□□ -1.91
CCNT1-204ENST00000551989 RPS29P62273 56 aaKnown RBP3.13□□□□□ -1.91
CCNT1-204ENST00000551989 KRTAP15-1Q3LI76 137 aa3.13□□□□□ -1.91
CCNT1-204ENST00000551989 Q6ZSA8 131 aa3.13□□□□□ -1.91
CCNT1-204ENST00000551989 CIRBP-AS1Q8TBR5 109 aa3.13□□□□□ -1.91
CCNT1-204ENST00000551989 IGKV2-30P06310 120 aa3.12□□□□□ -1.91
CCNT1-204ENST00000551989 Q5W150 140 aa3.12□□□□□ -1.91
CCNT1-204ENST00000551989 SPAG11AQ6PDA7 123 aa3.12□□□□□ -1.91
CCNT1-204ENST00000551989 SPINK6Q6UWN8 80 aa3.12□□□□□ -1.91
CCNT1-204ENST00000551989 A6NN06 94 aa3.1□□□□□ -1.91
CCNT1-204ENST00000551989 SPINK1P00995 79 aa3.09□□□□□ -1.91
CCNT1-204ENST00000551989 C7orf65Q6ZTY9 151 aa3.09□□□□□ -1.91
CCNT1-204ENST00000551989 ANAPC11Q9NYG5 84 aa3.09□□□□□ -1.91
CCNT1-204ENST00000551989 DNAH9Q9NYC9 4486 aa3.09□□□□□ -1.92
CCNT1-204ENST00000551989 KRTAP16-1A8MUX0 517 aa3.08□□□□□ -1.92
CCNT1-204ENST00000551989 LY6G6CO95867 125 aa3.08□□□□□ -1.92
CCNT1-204ENST00000551989 SPTSSBQ8NFR3 76 aa3.08□□□□□ -1.92
CCNT1-204ENST00000551989 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
CCNT1-204ENST00000551989 NBEAL1Q6ZS30 2694 aa3.08□□□□□ -1.92
CCNT1-204ENST00000551989 TENM2Q9NT68 2774 aa3.07□□□□□ -1.92
CCNT1-204ENST00000551989 A0A1B0GU69 56 aa3.07□□□□□ -1.92
CCNT1-204ENST00000551989 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
CCNT1-204ENST00000551989 FBN1P35555 2871 aaKnown RBP3.06□□□□□ -1.92
CCNT1-204ENST00000551989 STAB2Q8WWQ8 2551 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 IGKV2D-30A0A075B6S6 120 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 UQCR11O14957 56 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 KRTAP1-4P0C5Y4 121 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 SPINK7P58062 85 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 LINC01554Q52M75 96 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 SPATA8Q6RVD6 105 aa3.05□□□□□ -1.92
CCNT1-204ENST00000551989 DNAH10Q8IVF4 4471 aa3.04□□□□□ -1.92
CCNT1-204ENST00000551989 TYMSOSQ8TAI1 123 aa3.04□□□□□ -1.92
CCNT1-204ENST00000551989 COL6A5A8TX70 2615 aa3.04□□□□□ -1.92
CCNT1-204ENST00000551989 A8MU10 97 aa3.03□□□□□ -1.92
CCNT1-204ENST00000551989 DNAH6Q9C0G6 4158 aa3.03□□□□□ -1.92
CCNT1-204ENST00000551989 VPS13DQ5THJ4 4388 aa3.02□□□□□ -1.93
CCNT1-204ENST00000551989 KRTAP10-1P60331 282 aa3.02□□□□□ -1.93
CCNT1-204ENST00000551989 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
CCNT1-204ENST00000551989 DNAH17Q9UFH2 4485 aa3.02□□□□□ -1.93
CCNT1-204ENST00000551989 MGAM2Q2M2H8 2515 aa3.01□□□□□ -1.93
CCNT1-204ENST00000551989 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
CCNT1-204ENST00000551989 LYSTQ99698 3801 aa3.01□□□□□ -1.93
CCNT1-204ENST00000551989 PLECQ15149 4684 aaKnown RBP3□□□□□ -1.93
CCNT1-204ENST00000551989 KRTAP21-3Q3LHN1 58 aa3□□□□□ -1.93
CCNT1-204ENST00000551989 CSMD3Q7Z407 3707 aa2.99□□□□□ -1.93
CCNT1-204ENST00000551989 DNAH7Q8WXX0 4024 aa2.99□□□□□ -1.93
CCNT1-204ENST00000551989 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
CCNT1-204ENST00000551989 ALMS1Q8TCU4 4167 aa2.98□□□□□ -1.93
CCNT1-204ENST00000551989 A8MUU9 505 aa2.98□□□□□ -1.93
CCNT1-204ENST00000551989 CAMK2N1Q7Z7J9 78 aa2.98□□□□□ -1.93
CCNT1-204ENST00000551989 PRKDCP78527 4128 aaKnown RBP2.97□□□□□ -1.93
CCNT1-204ENST00000551989 HECTD4Q9Y4D8 3996 aa2.97□□□□□ -1.93
CCNT1-204ENST00000551989 COL7A1Q02388 2944 aa2.97□□□□□ -1.93
CCNT1-204ENST00000551989 RETNLBQ9BQ08 111 aa2.97□□□□□ -1.93
CCNT1-204ENST00000551989 STARD9Q9P2P6 4700 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms