RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 FRAS1Q86XX4 4008 aa7.79□□□□□ -1.16
CACNB3-219ENST00000551544 LOC101927531A0A1B0GV80 90 aa7.79□□□□□ -1.16
CACNB3-219ENST00000551544 Q75L30 129 aa7.79□□□□□ -1.16
CACNB3-219ENST00000551544 HECTD4Q9Y4D8 3996 aa7.78□□□□□ -1.16
CACNB3-219ENST00000551544 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
CACNB3-219ENST00000551544 COA5Q86WW8 74 aa7.78□□□□□ -1.16
CACNB3-219ENST00000551544 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
CACNB3-219ENST00000551544 C8orf87E5RJ46 101 aa7.77□□□□□ -1.17
CACNB3-219ENST00000551544 ASB16-AS1Q495Z4 193 aa7.77□□□□□ -1.17
CACNB3-219ENST00000551544 TP53AIP1Q9HCN2 124 aa7.76□□□□□ -1.17
CACNB3-219ENST00000551544 DNAH8Q96JB1 4490 aa7.75□□□□□ -1.17
CACNB3-219ENST00000551544 A0A087X002 238 aa7.75□□□□□ -1.17
CACNB3-219ENST00000551544 C1orf134Q5TEV5 83 aa7.75□□□□□ -1.17
CACNB3-219ENST00000551544 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
CACNB3-219ENST00000551544 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
CACNB3-219ENST00000551544 SPTSSBQ8NFR3 76 aa7.74□□□□□ -1.17
CACNB3-219ENST00000551544 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
CACNB3-219ENST00000551544 TGP01266 2768 aa7.74□□□□□ -1.17
CACNB3-219ENST00000551544 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
CACNB3-219ENST00000551544 MRPL34Q9BQ48 92 aaKnown RBP7.72□□□□□ -1.17
CACNB3-219ENST00000551544 IGLV7-43P04211 117 aa7.72□□□□□ -1.17
CACNB3-219ENST00000551544 LCA10Q71F78 164 aa7.72□□□□□ -1.17
CACNB3-219ENST00000551544 CIRBP-AS1Q8TBR5 109 aa7.72□□□□□ -1.17
CACNB3-219ENST00000551544 DNAH17Q9UFH2 4485 aa7.71□□□□□ -1.17
CACNB3-219ENST00000551544 LY6G6CO95867 125 aa7.71□□□□□ -1.18
CACNB3-219ENST00000551544 A6NED7 52 aa7.7□□□□□ -1.18
CACNB3-219ENST00000551544 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
CACNB3-219ENST00000551544 MEGF8Q7Z7M0 2845 aa7.69□□□□□ -1.18
CACNB3-219ENST00000551544 FBN3Q75N90 2809 aa7.68□□□□□ -1.18
CACNB3-219ENST00000551544 A6NN06 94 aa7.68□□□□□ -1.18
CACNB3-219ENST00000551544 CDC42SE1Q9NRR8 79 aa7.68□□□□□ -1.18
CACNB3-219ENST00000551544 C7orf65Q6ZTY9 151 aa7.65□□□□□ -1.18
CACNB3-219ENST00000551544 KRTAP10-2P60368 255 aa7.64□□□□□ -1.19
CACNB3-219ENST00000551544 SPAG11AQ6PDA7 123 aa7.62□□□□□ -1.19
CACNB3-219ENST00000551544 Q5W150 140 aa7.62□□□□□ -1.19
CACNB3-219ENST00000551544 HRES1P13985 223 aa7.61□□□□□ -1.19
CACNB3-219ENST00000551544 DNAH6Q9C0G6 4158 aa7.61□□□□□ -1.19
CACNB3-219ENST00000551544 PRR26Q8N8Z3 221 aa7.6□□□□□ -1.19
CACNB3-219ENST00000551544 DNHD1Q96M86 4753 aa7.6□□□□□ -1.19
CACNB3-219ENST00000551544 SSBP3-AS1Q7Z2R9 100 aa7.6□□□□□ -1.19
CACNB3-219ENST00000551544 ALMS1Q8TCU4 4167 aa7.59□□□□□ -1.19
CACNB3-219ENST00000551544 DNAH11Q96DT5 4516 aa7.57□□□□□ -1.2
CACNB3-219ENST00000551544 KRTAP13-3Q3SY46 172 aa7.55□□□□□ -1.2
CACNB3-219ENST00000551544 SPINK7P58062 85 aa7.54□□□□□ -1.2
CACNB3-219ENST00000551544 DNAH5Q8TE73 4624 aa7.54□□□□□ -1.2
CACNB3-219ENST00000551544 KRTAP13-2Q52LG2 175 aa7.54□□□□□ -1.2
CACNB3-219ENST00000551544 RETNLBQ9BQ08 111 aa7.54□□□□□ -1.2
CACNB3-219ENST00000551544 KRTAP10-1P60331 282 aa7.53□□□□□ -1.2
CACNB3-219ENST00000551544 LINC00313P59037 77 aa7.53□□□□□ -1.2
CACNB3-219ENST00000551544 Q6ZSA8 131 aa7.48□□□□□ -1.21
CACNB3-219ENST00000551544 LRP1BQ9NZR2 4599 aa7.47□□□□□ -1.21
CACNB3-219ENST00000551544 ACYP2P14621 99 aa7.46□□□□□ -1.22
CACNB3-219ENST00000551544 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
CACNB3-219ENST00000551544 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
CACNB3-219ENST00000551544 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
CACNB3-219ENST00000551544 KRTAP1-4P0C5Y4 121 aa7.44□□□□□ -1.22
CACNB3-219ENST00000551544 HYDINQ4G0P3 5121 aa7.42□□□□□ -1.22
CACNB3-219ENST00000551544 DMAC1Q96GE9 116 aa7.41□□□□□ -1.22
CACNB3-219ENST00000551544 PKD1P98161 4303 aa7.41□□□□□ -1.22
CACNB3-219ENST00000551544 KRTAP16-1A8MUX0 517 aa7.4□□□□□ -1.22
CACNB3-219ENST00000551544 PLA2G1BP04054 148 aaKnown RBP7.4□□□□□ -1.22
CACNB3-219ENST00000551544 IGKV2-30P06310 120 aa7.4□□□□□ -1.23
CACNB3-219ENST00000551544 FAT2Q9NYQ8 4349 aa7.39□□□□□ -1.23
CACNB3-219ENST00000551544 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
CACNB3-219ENST00000551544 TYMSOSQ8TAI1 123 aa7.37□□□□□ -1.23
CACNB3-219ENST00000551544 IGKV2D-30A0A075B6S6 120 aa7.37□□□□□ -1.23
CACNB3-219ENST00000551544 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
CACNB3-219ENST00000551544 A0A1B0GU69 56 aa7.33□□□□□ -1.24
CACNB3-219ENST00000551544 SPATA8Q6RVD6 105 aa7.32□□□□□ -1.24
CACNB3-219ENST00000551544 SPINK1P00995 79 aa7.31□□□□□ -1.24
CACNB3-219ENST00000551544 SMR3BP02814 79 aaPredicted RBP7.26□□□□□ -1.25
CACNB3-219ENST00000551544 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
CACNB3-219ENST00000551544 UQCR11O14957 56 aa7.24□□□□□ -1.25
CACNB3-219ENST00000551544 PKHD1P08F94 4074 aa7.24□□□□□ -1.25
CACNB3-219ENST00000551544 MIR22HGQ0VDD5 57 aa7.23□□□□□ -1.25
CACNB3-219ENST00000551544 Q8N1X5 172 aa7.2□□□□□ -1.26
CACNB3-219ENST00000551544 C9orf92A6NGG3 77 aa7.17□□□□□ -1.26
CACNB3-219ENST00000551544 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
CACNB3-219ENST00000551544 SACSQ9NZJ4 4579 aa7.13□□□□□ -1.27
CACNB3-219ENST00000551544 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
CACNB3-219ENST00000551544 DYNC1H1Q14204 4646 aaKnown RBP7.11□□□□□ -1.27
CACNB3-219ENST00000551544 FAT1Q14517 4588 aa7.1□□□□□ -1.27
CACNB3-219ENST00000551544 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
CACNB3-219ENST00000551544 A8MUU9 505 aa7.06□□□□□ -1.28
CACNB3-219ENST00000551544 KRTAP10-4P60372 401 aaPredicted RBP7.06□□□□□ -1.28
CACNB3-219ENST00000551544 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
CACNB3-219ENST00000551544 APOBP04114 4563 aaKnown RBP7.01□□□□□ -1.29
CACNB3-219ENST00000551544 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
CACNB3-219ENST00000551544 KRTAP3-1Q9BYR8 98 aa6.99□□□□□ -1.29
CACNB3-219ENST00000551544 ROMO1P60602 79 aa6.96□□□□□ -1.3
CACNB3-219ENST00000551544 H0YAA0 97 aa6.93□□□□□ -1.3
CACNB3-219ENST00000551544 FLG2Q5D862 2391 aaPredicted RBP6.93□□□□□ -1.3
CACNB3-219ENST00000551544 A0A0A0MQY5 61 aa6.93□□□□□ -1.3
CACNB3-219ENST00000551544 RYR2Q92736 4967 aa6.87□□□□□ -1.31
CACNB3-219ENST00000551544 A0A1B0GU33 70 aa6.86□□□□□ -1.31
CACNB3-219ENST00000551544 COX6B2Q6YFQ2 88 aa6.86□□□□□ -1.31
CACNB3-219ENST00000551544 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
CACNB3-219ENST00000551544 H1FX-AS1Q4G0G2 97 aa6.84□□□□□ -1.31
CACNB3-219ENST00000551544 LRP1Q07954 4544 aaKnown RBP6.83□□□□□ -1.32
CACNB3-219ENST00000551544 KMT2CQ8NEZ4 4911 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms