RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 KRTAP9-3Q9BYQ3 159 aa8.92□□□□□ -0.98
PRPF40B-215ENST00000551418 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
PRPF40B-215ENST00000551418 VPS25Q9BRG1 176 aa8.91□□□□□ -0.98
PRPF40B-215ENST00000551418 FAM236DA0A1B0GTK5 79 aa8.9□□□□□ -0.98
PRPF40B-215ENST00000551418 M0R143 59 aa8.9□□□□□ -0.98
PRPF40B-215ENST00000551418 FAM236CP0DP71 79 aa8.9□□□□□ -0.98
PRPF40B-215ENST00000551418 HRES1P13985 223 aa8.9□□□□□ -0.98
PRPF40B-215ENST00000551418 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.98
PRPF40B-215ENST00000551418 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
PRPF40B-215ENST00000551418 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
PRPF40B-215ENST00000551418 C9JAW5 83 aa8.88□□□□□ -0.99
PRPF40B-215ENST00000551418 DEFB116Q30KQ4 102 aa8.88□□□□□ -0.99
PRPF40B-215ENST00000551418 J3KT08 172 aa8.87□□□□□ -0.99
PRPF40B-215ENST00000551418 BAALC-AS2P0C853 105 aa8.87□□□□□ -0.99
PRPF40B-215ENST00000551418 KRTAP10-10P60014 251 aa8.87□□□□□ -0.99
PRPF40B-215ENST00000551418 A0A1B0GVX0 72 aa8.84□□□□□ -0.99
PRPF40B-215ENST00000551418 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
PRPF40B-215ENST00000551418 A0A1B0GW54 56 aa8.83□□□□□ -1
PRPF40B-215ENST00000551418 JMJD7-PLA2G4BH0Y9G9 81 aa8.83□□□□□ -1
PRPF40B-215ENST00000551418 RBM12B-AS1Q9P1G2 102 aa8.82□□□□□ -1
PRPF40B-215ENST00000551418 NDUFB1O75438 58 aa8.8□□□□□ -1
PRPF40B-215ENST00000551418 PDE6GP18545 87 aa8.8□□□□□ -1
PRPF40B-215ENST00000551418 LYRM7Q5U5X0 104 aa8.8□□□□□ -1
PRPF40B-215ENST00000551418 Q6ZQT0 140 aa8.79□□□□□ -1
PRPF40B-215ENST00000551418 SMIM6P0DI80 62 aa8.77□□□□□ -1.01
PRPF40B-215ENST00000551418 LOC110117498A0A087WWA1 95 aa8.75□□□□□ -1.01
PRPF40B-215ENST00000551418 MACF1Q9UPN3 7388 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-215ENST00000551418 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
PRPF40B-215ENST00000551418 SYNE2Q8WXH0 6885 aaKnown RBP8.74□□□□□ -1.01
PRPF40B-215ENST00000551418 ZCCHC13Q8WW36 166 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-215ENST00000551418 NAA38Q9BRA0 125 aaKnown RBP8.71□□□□□ -1.02
PRPF40B-215ENST00000551418 A8MWP4 228 aa8.7□□□□□ -1.02
PRPF40B-215ENST00000551418 TSTD3H0UI37 97 aa8.7□□□□□ -1.02
PRPF40B-215ENST00000551418 Q8N9P0 234 aaPredicted RBP8.68□□□□□ -1.02
PRPF40B-215ENST00000551418 C14orf132Q9NPU4 83 aa8.67□□□□□ -1.02
PRPF40B-215ENST00000551418 KRTAP19-6Q3LI70 58 aa8.66□□□□□ -1.02
PRPF40B-215ENST00000551418 C8orf17Q9NRJ1 99 aa8.66□□□□□ -1.02
PRPF40B-215ENST00000551418 SPINK7P58062 85 aa8.64□□□□□ -1.03
PRPF40B-215ENST00000551418 NREPQ16612 68 aa8.64□□□□□ -1.03
PRPF40B-215ENST00000551418 BATFQ16520 125 aa8.62□□□□□ -1.03
PRPF40B-215ENST00000551418 IGKV3D-7A0A0C4DH55 119 aa8.61□□□□□ -1.03
PRPF40B-215ENST00000551418 Q6ZVQ6 151 aa8.61□□□□□ -1.03
PRPF40B-215ENST00000551418 H3BT86 120 aa8.6□□□□□ -1.03
PRPF40B-215ENST00000551418 PRR15Q8IV56 129 aa8.6□□□□□ -1.03
PRPF40B-215ENST00000551418 C9orf118A6NHY6 69 aa8.57□□□□□ -1.04
PRPF40B-215ENST00000551418 TMEM254Q8TBM7 123 aa8.55□□□□□ -1.04
PRPF40B-215ENST00000551418 MRPL34Q9BQ48 92 aaKnown RBP8.54□□□□□ -1.04
PRPF40B-215ENST00000551418 WFDC13Q8IUB5 93 aa8.53□□□□□ -1.04
PRPF40B-215ENST00000551418 LINC00846Q9NV44 126 aa8.53□□□□□ -1.04
PRPF40B-215ENST00000551418 A0A1W2PPM0 123 aa8.52□□□□□ -1.05
PRPF40B-215ENST00000551418 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
PRPF40B-215ENST00000551418 hDV103S1A0JD37 113 aa8.5□□□□□ -1.05
PRPF40B-215ENST00000551418 TAX1BP3O14907 124 aa8.49□□□□□ -1.05
PRPF40B-215ENST00000551418 BPY2O14599 106 aa8.48□□□□□ -1.05
PRPF40B-215ENST00000551418 K7EQZ3 153 aa8.47□□□□□ -1.05
PRPF40B-215ENST00000551418 NDUFS5O43920 106 aa8.47□□□□□ -1.05
PRPF40B-215ENST00000551418 KRTAP6-3Q3LI67 103 aa8.44□□□□□ -1.06
PRPF40B-215ENST00000551418 LOC105371267A0A1B0GV96 52 aa8.42□□□□□ -1.06
PRPF40B-215ENST00000551418 SPCS1Q9Y6A9 102 aa8.41□□□□□ -1.06
PRPF40B-215ENST00000551418 C7orf65Q6ZTY9 151 aa8.37□□□□□ -1.07
PRPF40B-215ENST00000551418 H1FX-AS1Q4G0G2 97 aa8.36□□□□□ -1.07
PRPF40B-215ENST00000551418 CASC2Q6XLA1 102 aa8.36□□□□□ -1.07
PRPF40B-215ENST00000551418 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
PRPF40B-215ENST00000551418 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
PRPF40B-215ENST00000551418 UBL5Q9BZL1 73 aa8.33□□□□□ -1.08
PRPF40B-215ENST00000551418 COL5A1-AS1Q5SY13 56 aa8.32□□□□□ -1.08
PRPF40B-215ENST00000551418 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
PRPF40B-215ENST00000551418 CXCL6P80162 114 aa8.3□□□□□ -1.08
PRPF40B-215ENST00000551418 Q8N9L7 120 aa8.29□□□□□ -1.08
PRPF40B-215ENST00000551418 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
PRPF40B-215ENST00000551418 Q5W150 140 aa8.27□□□□□ -1.09
PRPF40B-215ENST00000551418 K7EP34 96 aa8.25□□□□□ -1.09
PRPF40B-215ENST00000551418 PRO0461Q9UI25 63 aa8.23□□□□□ -1.09
PRPF40B-215ENST00000551418 NEBP20929 6669 aa8.22□□□□□ -1.09
PRPF40B-215ENST00000551418 GTF2H5Q6ZYL4 71 aa8.2□□□□□ -1.1
PRPF40B-215ENST00000551418 C4orf26Q17RF5 130 aa8.16□□□□□ -1.1
PRPF40B-215ENST00000551418 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
PRPF40B-215ENST00000551418 MT1BP07438 61 aa8.15□□□□□ -1.1
PRPF40B-215ENST00000551418 F8W1H4 67 aa8.14□□□□□ -1.11
PRPF40B-215ENST00000551418 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
PRPF40B-215ENST00000551418 A6NN06 94 aa8.11□□□□□ -1.11
PRPF40B-215ENST00000551418 C5orf47Q569G3 176 aa8.1□□□□□ -1.11
PRPF40B-215ENST00000551418 KRTAP3-1Q9BYR8 98 aa8.06□□□□□ -1.12
PRPF40B-215ENST00000551418 S4R3F8 94 aa8.06□□□□□ -1.12
PRPF40B-215ENST00000551418 ETDBQ3ZM63 59 aa8.05□□□□□ -1.12
PRPF40B-215ENST00000551418 C1orf64Q8NEQ6 169 aa8.05□□□□□ -1.12
PRPF40B-215ENST00000551418 FAM236AA0A1B0GUQ0 79 aa8.04□□□□□ -1.12
PRPF40B-215ENST00000551418 FAM236BA0A1B0GV22 79 aa8.04□□□□□ -1.12
PRPF40B-215ENST00000551418 KRTAP19-8Q3LI54 63 aa8.03□□□□□ -1.12
PRPF40B-215ENST00000551418 Q5VV11 94 aa8.03□□□□□ -1.12
PRPF40B-215ENST00000551418 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
PRPF40B-215ENST00000551418 SPRR2GQ9BYE4 73 aa8□□□□□ -1.13
PRPF40B-215ENST00000551418 KRTAP10-5P60370 271 aa7.99□□□□□ -1.13
PRPF40B-215ENST00000551418 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
PRPF40B-215ENST00000551418 ACYP1P07311 99 aa7.98□□□□□ -1.13
PRPF40B-215ENST00000551418 KRTAP20-1Q3LI63 56 aa7.98□□□□□ -1.13
PRPF40B-215ENST00000551418 LCA10Q71F78 164 aa7.95□□□□□ -1.14
PRPF40B-215ENST00000551418 TRAV22A0A0B4J277 110 aa7.94□□□□□ -1.14
PRPF40B-215ENST00000551418 ATP5EP2Q5VTU8 51 aa7.94□□□□□ -1.14
PRPF40B-215ENST00000551418 LOC101927531A0A1B0GV80 90 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms