RNA–Protein interactions for RNA: ENST00000551211.1

SVOP-204, Transcript of SV2 related protein, humanhuman

TSL 3

Gene SVOP, Length 439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-204ENST00000551211 CSPG4Q6UVK1 2322 aa0.04□□□□□ -2.4
SVOP-204ENST00000551211 MAP1BP46821 2468 aaKnown RBP0.04□□□□□ -2.4
SVOP-204ENST00000551211 RIF1Q5UIP0 2472 aaKnown RBP0.04□□□□□ -2.4
SVOP-204ENST00000551211 HRNRQ86YZ3 2850 aaPredicted RBP0.04□□□□□ -2.4
SVOP-204ENST00000551211 PRRC2CQ9Y520 2896 aaKnown RBP0.04□□□□□ -2.4
SVOP-204ENST00000551211 LRRK2Q5S007 2527 aa0.04□□□□□ -2.4
SVOP-204ENST00000551211 PCLOQ9Y6V0 5065 aa0.04□□□□□ -2.4
SVOP-204ENST00000551211 EFCAB6Q5THR3 1501 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 ITPR2Q14571 2701 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 ABCC8Q09428 1581 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 GVINP1Q7Z2Y8 2422 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 LMO7Q8WWI1 1683 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 IGIPA6NJ69 53 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 NOP10Q9NPE3 64 aaKnown RBP0.03□□□□□ -2.4
SVOP-204ENST00000551211 ABRACLQ9P1F3 81 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 MUC2Q02817 5179 aa0.03□□□□□ -2.4
SVOP-204ENST00000551211 FANCD2Q9BXW9 1451 aa0.03□□□□□ -2.41
SVOP-204ENST00000551211 ALMS1Q8TCU4 4167 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 KIF21BO75037 1637 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 FAM208AQ9UK61 1670 aaKnown RBP0.02□□□□□ -2.41
SVOP-204ENST00000551211 H0YGX0 51 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 PLNP26678 52 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 LINC00308Q8TCZ7 52 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 CFAP46Q8IYW2 2715 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 TGP01266 2768 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 CHD9Q3L8U1 2897 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 LPAP08519 4548 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 CCDC168Q8NDH2 2452 aa0.02□□□□□ -2.41
SVOP-204ENST00000551211 ATRQ13535 2644 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 WDR87Q6ZQQ6 2873 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 KIAA1109Q2LD37 5005 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 BPTFQ12830 3046 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 COL12A1Q99715 3063 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 HUWE1Q7Z6Z7 4374 aaKnown RBP0.01□□□□□ -2.41
SVOP-204ENST00000551211 PCNX1Q96RV3 2341 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 CSMD3Q7Z407 3707 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 IGLV5-48A0A075B6I7 105 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 SPRR2EP22531 72 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 KRTAP20-1Q3LI63 56 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 KRTAP6-2Q3LI66 62 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 CMC2Q9NRP2 79 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 NF1P21359 2839 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 AGLP35573 1532 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 RYR3Q15413 4870 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 IQGAP1P46940 1657 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 KNL1Q8NG31 2342 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 WNK1Q9H4A3 2382 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 SPTA1P02549 2419 aa0.01□□□□□ -2.41
SVOP-204ENST00000551211 UBR4Q5T4S7 5183 aa0□□□□□ -2.41
SVOP-204ENST00000551211 GCN1Q92616 2671 aaKnown RBP0□□□□□ -2.41
SVOP-204ENST00000551211 RNF213Q63HN8 5207 aa0□□□□□ -2.41
SVOP-204ENST00000551211 SMIM27A0A1W2PRY6 76 aa0□□□□□ -2.41
SVOP-204ENST00000551211 DEFB110Q30KQ9 67 aa0□□□□□ -2.41
SVOP-204ENST00000551211 KRTAP6-1Q3LI64 71 aa0□□□□□ -2.41
SVOP-204ENST00000551211 LRP1BQ9NZR2 4599 aa0□□□□□ -2.41
SVOP-204ENST00000551211 RYR1P21817 5038 aa-0□□□□□ -2.41
SVOP-204ENST00000551211 ITPR3Q14573 2671 aa-0□□□□□ -2.41
SVOP-204ENST00000551211 APC2O95996 2303 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 PDE4DIPQ5VU43 2346 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 DDX60Q8IY21 1712 aaKnown RBP-0.01□□□□□ -2.41
SVOP-204ENST00000551211 HSPG2P98160 4391 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 TEX15Q9BXT5 2789 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 CEP295Q9C0D2 2601 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 MMP24-AS1A0A0U1RRL7 71 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 M0QY20 66 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 TNP1P09430 55 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 WFDC10BQ8IUB3 73 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 SPRR2FQ96RM1 72 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 KAAG1Q9UBP8 84 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 TRANK1O15050 2925 aa-0.01□□□□□ -2.41
SVOP-204ENST00000551211 NIPBLQ6KC79 2804 aaeCLIP-0.01□□□□□ -2.41
SVOP-204ENST00000551211 KMT2CQ8NEZ4 4911 aaKnown RBP-0.02□□□□□ -2.41
SVOP-204ENST00000551211 IQGAP2Q13576 1575 aa-0.02□□□□□ -2.41
SVOP-204ENST00000551211 MT1AP04731 61 aa-0.02□□□□□ -2.41
SVOP-204ENST00000551211 FAT3Q8TDW7 4589 aa-0.02□□□□□ -2.41
SVOP-204ENST00000551211 CLTCL1P53675 1640 aa-0.02□□□□□ -2.41
SVOP-204ENST00000551211 FLNBO75369 2602 aaKnown RBP-0.02□□□□□ -2.41
SVOP-204ENST00000551211 MYO9AB2RTY4 2548 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 HERC1Q15751 4861 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 MXRA5Q9NR99 2828 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 LAMA2P24043 3122 aaKnown RBP-0.03□□□□□ -2.41
SVOP-204ENST00000551211 HYDINQ4G0P3 5121 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 A8MTW9 85 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 SNRPGP15A8MWD9 76 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 M0QZ58 72 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 DEFB131AP59861 70 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 KRTAP19-7Q3SYF9 63 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 MTORP42345 2549 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 TLN1Q9Y490 2541 aaKnown RBP-0.03□□□□□ -2.41
SVOP-204ENST00000551211 TACC2O95359 2948 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 TRPM2O94759 1503 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 NFAT5O94916 1531 aa-0.03□□□□□ -2.41
SVOP-204ENST00000551211 NBEAQ8NFP9 2946 aa-0.03□□□□□ -2.42
SVOP-204ENST00000551211 LRP2P98164 4655 aa-0.04□□□□□ -2.42
SVOP-204ENST00000551211 PKD1L1Q8TDX9 2849 aa-0.04□□□□□ -2.42
SVOP-204ENST00000551211 CLPSL2Q6UWE3 100 aa-0.04□□□□□ -2.42
SVOP-204ENST00000551211 SMIM2Q9BVW6 85 aa-0.04□□□□□ -2.42
SVOP-204ENST00000551211 REV3LO60673 3130 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms