RNA–Protein interactions for RNA: ENST00000551211.1

SVOP-204, Transcript of SV2 related protein, humanhuman

TSL 3

Gene SVOP, Length 439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVOP-204ENST00000551211 AEBP2Q6ZN18 517 aaPredicted RBP11.62□□□□□ -0.55
SVOP-204ENST00000551211 CHIC1Q5VXU3 224 aa10.8□□□□□ -0.68
SVOP-204ENST00000551211 SENP3Q9H4L4 574 aaPredicted RBP9.91□□□□□ -0.82
SVOP-204ENST00000551211 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
SVOP-204ENST00000551211 POTEDQ86YR6 584 aa9.53□□□□□ -0.88
SVOP-204ENST00000551211 FOXD1Q16676 465 aa9.36□□□□□ -0.91
SVOP-204ENST00000551211 MSH5O43196 834 aa8.86□□□□□ -0.99
SVOP-204ENST00000551211 PIAS4Q8N2W9 510 aaPredicted RBP8.67□□□□□ -1.02
SVOP-204ENST00000551211 PPP6R1Q9UPN7 881 aa8.43□□□□□ -1.06
SVOP-204ENST00000551211 ADRA2BP18089 450 aa8.41□□□□□ -1.06
SVOP-204ENST00000551211 PLPPR3Q6T4P5 718 aa8.19□□□□□ -1.1
SVOP-204ENST00000551211 CACNB1Q02641 598 aaPredicted RBP8.03□□□□□ -1.12
SVOP-204ENST00000551211 MAPK8IP2Q13387 824 aaPredicted RBP7.89□□□□□ -1.15
SVOP-204ENST00000551211 DMRT2Q9Y5R5 561 aa7.78□□□□□ -1.16
SVOP-204ENST00000551211 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
SVOP-204ENST00000551211 SCAF1Q9H7N4 1312 aaKnown RBP7.58□□□□□ -1.2
SVOP-204ENST00000551211 RNF39Q9H2S5 420 aa7.53□□□□□ -1.2
SVOP-204ENST00000551211 POTEHQ6S545 545 aa7.38□□□□□ -1.23
SVOP-204ENST00000551211 C1QBPQ07021 282 aaKnown RBP7.37□□□□□ -1.23
SVOP-204ENST00000551211 HOXD11P31277 338 aaPredicted RBP7.27□□□□□ -1.25
SVOP-204ENST00000551211 PPP4R3CPQ6ZMV5 832 aa7.17□□□□□ -1.26
SVOP-204ENST00000551211 RNF216Q9NWF9 866 aaPredicted RBP7.12□□□□□ -1.27
SVOP-204ENST00000551211 CNKSR2Q8WXI2 1034 aa7.09□□□□□ -1.27
SVOP-204ENST00000551211 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.09□□□□□ -1.27
SVOP-204ENST00000551211 CAPN15O75808 1086 aa6.97□□□□□ -1.29
SVOP-204ENST00000551211 DNAJC5BQ9UF47 199 aa6.96□□□□□ -1.3
SVOP-204ENST00000551211 DSG3P32926 999 aa6.93□□□□□ -1.3
SVOP-204ENST00000551211 SPINK5Q9NQ38 1064 aaPredicted RBP6.93□□□□□ -1.3
SVOP-204ENST00000551211 U3KPZ7 1027 aaPredicted RBP6.82□□□□□ -1.32
SVOP-204ENST00000551211 ABCB7O75027 752 aa6.81□□□□□ -1.32
SVOP-204ENST00000551211 TRHP20396 242 aaPredicted RBP6.77□□□□□ -1.33
SVOP-204ENST00000551211 NCBP3Q53F19 620 aaKnown RBP6.71□□□□□ -1.34
SVOP-204ENST00000551211 CHRDL2Q6WN34 429 aa6.69□□□□□ -1.34
SVOP-204ENST00000551211 SP7Q8TDD2 431 aaPredicted RBP6.68□□□□□ -1.34
SVOP-204ENST00000551211 NPM3O75607 178 aaKnown RBP6.65□□□□□ -1.34
SVOP-204ENST00000551211 ZNF219Q9P2Y4 722 aaPredicted RBP6.59□□□□□ -1.35
SVOP-204ENST00000551211 RBM42Q9BTD8 480 aaKnown RBP6.58□□□□□ -1.36
SVOP-204ENST00000551211 HAX1O00165 279 aa6.52□□□□□ -1.37
SVOP-204ENST00000551211 APLP2Q06481 763 aa6.5□□□□□ -1.37
SVOP-204ENST00000551211 SLC4A2P04920 1241 aa6.46□□□□□ -1.38
SVOP-204ENST00000551211 PIP4P2Q8N4L2 257 aa6.44□□□□□ -1.38
SVOP-204ENST00000551211 PLSCR2Q9NRY7 297 aa6.43□□□□□ -1.38
SVOP-204ENST00000551211 POLA2Q14181 598 aa6.41□□□□□ -1.38
SVOP-204ENST00000551211 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.39□□□□□ -1.39
SVOP-204ENST00000551211 HNRNPUL2Q1KMD3 747 aaKnown RBP6.39□□□□□ -1.39
SVOP-204ENST00000551211 EVX2Q03828 476 aa6.38□□□□□ -1.39
SVOP-204ENST00000551211 SAMD1Q6SPF0 538 aaPredicted RBP6.36□□□□□ -1.39
SVOP-204ENST00000551211 REM2Q8IYK8 340 aaPredicted RBP6.34□□□□□ -1.39
SVOP-204ENST00000551211 AKT1S1Q96B36 256 aa6.33□□□□□ -1.4
SVOP-204ENST00000551211 PITPNM1O00562 1244 aa6.29□□□□□ -1.4
SVOP-204ENST00000551211 LHX8Q68G74 356 aa6.29□□□□□ -1.4
SVOP-204ENST00000551211 FXR2P51116 673 aaKnown RBP eCLIP6.25□□□□□ -1.41
SVOP-204ENST00000551211 OSCARQ8IYS5 282 aa6.25□□□□□ -1.41
SVOP-204ENST00000551211 GABBR2O75899 941 aa6.17□□□□□ -1.42
SVOP-204ENST00000551211 KCNA4P22459 653 aa6.16□□□□□ -1.42
SVOP-204ENST00000551211 PRKAR2AP13861 404 aaKnown RBP6.15□□□□□ -1.42
SVOP-204ENST00000551211 ZBTB12Q9Y330 459 aaPredicted RBP6.13□□□□□ -1.43
SVOP-204ENST00000551211 MYCNP04198 464 aaPredicted RBP6.12□□□□□ -1.43
SVOP-204ENST00000551211 CLEC11AQ9Y240 323 aa6.12□□□□□ -1.43
SVOP-204ENST00000551211 ATF5Q9Y2D1 282 aaPredicted RBP6.12□□□□□ -1.43
SVOP-204ENST00000551211 C19orf67A6NJJ6 358 aa6.08□□□□□ -1.44
SVOP-204ENST00000551211 CHADLQ6NUI6 762 aa6.05□□□□□ -1.44
SVOP-204ENST00000551211 POTEIP0CG38 1075 aa6.03□□□□□ -1.44
SVOP-204ENST00000551211 POTEMA6NI47 508 aa5.97□□□□□ -1.45
SVOP-204ENST00000551211 SPDYE1Q8NFV5 336 aaPredicted RBP5.96□□□□□ -1.46
SVOP-204ENST00000551211 POTEGQ6S5H5 508 aa5.95□□□□□ -1.46
SVOP-204ENST00000551211 DCBLD2Q96PD2 775 aa5.94□□□□□ -1.46
SVOP-204ENST00000551211 SPDYE2BA6NHP3 402 aa5.92□□□□□ -1.46
SVOP-204ENST00000551211 SPDYE6P0CI01 402 aa5.92□□□□□ -1.46
SVOP-204ENST00000551211 CD44P16070 742 aaKnown RBP5.92□□□□□ -1.46
SVOP-204ENST00000551211 SPDYE2Q495Y8 402 aa5.92□□□□□ -1.46
SVOP-204ENST00000551211 OTUD5Q96G74 571 aa5.89□□□□□ -1.47
SVOP-204ENST00000551211 PRR29P0C7W0 189 aa5.88□□□□□ -1.47
SVOP-204ENST00000551211 ZNF692Q9BU19 519 aaPredicted RBP5.87□□□□□ -1.47
SVOP-204ENST00000551211 FBLN2P98095 1184 aa5.86□□□□□ -1.47
SVOP-204ENST00000551211 POTEB2H3BUK9 544 aa5.84□□□□□ -1.47
SVOP-204ENST00000551211 FOXD4L1Q9NU39 408 aa5.82□□□□□ -1.48
SVOP-204ENST00000551211 FARP1Q9Y4F1 1045 aaPredicted RBP5.8□□□□□ -1.48
SVOP-204ENST00000551211 ZRANB1Q9UGI0 708 aa5.79□□□□□ -1.48
SVOP-204ENST00000551211 GALR2O43603 387 aaPredicted RBP5.78□□□□□ -1.48
SVOP-204ENST00000551211 PABPN1Q86U42 306 aaKnown RBP eCLIP5.78□□□□□ -1.48
SVOP-204ENST00000551211 FAM163AQ96GL9 167 aaPredicted RBP5.78□□□□□ -1.48
SVOP-204ENST00000551211 SSUH2Q9Y2M2 353 aa5.77□□□□□ -1.49
SVOP-204ENST00000551211 MKRN4PQ13434 485 aaPredicted RBP5.76□□□□□ -1.49
SVOP-204ENST00000551211 PCDH10Q9P2E7 1040 aa5.73□□□□□ -1.49
SVOP-204ENST00000551211 CLCN6P51797 869 aa5.72□□□□□ -1.49
SVOP-204ENST00000551211 PELP1Q8IZL8 1130 aaKnown RBP5.71□□□□□ -1.5
SVOP-204ENST00000551211 ZNF579Q8NAF0 562 aaKnown RBP5.71□□□□□ -1.5
SVOP-204ENST00000551211 SLC4A1APQ9BWU0 796 aaKnown RBP5.71□□□□□ -1.5
SVOP-204ENST00000551211 PHF12Q96QT6 1004 aa5.69□□□□□ -1.5
SVOP-204ENST00000551211 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
SVOP-204ENST00000551211 POTEJP0CG39 1038 aa5.67□□□□□ -1.5
SVOP-204ENST00000551211 METRNQ9UJH8 293 aa5.66□□□□□ -1.5
SVOP-204ENST00000551211 ZBTB22O15209 634 aa5.64□□□□□ -1.51
SVOP-204ENST00000551211 CDAN1Q8IWY9 1227 aa5.63□□□□□ -1.51
SVOP-204ENST00000551211 PAK3O75914 559 aaPredicted RBP5.6□□□□□ -1.51
SVOP-204ENST00000551211 MAMSTRQ6ZN01 415 aa5.6□□□□□ -1.51
SVOP-204ENST00000551211 SCUBE2Q9NQ36 999 aa5.6□□□□□ -1.51
SVOP-204ENST00000551211 ATXN8OSP0DMR3 200 aa5.59□□□□□ -1.51
SVOP-204ENST00000551211 CREBZFQ9NS37 354 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms