RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 SLC25A20O43772 301 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 TIMM17BO60830 172 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 HBDP02042 147 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 MP68P56378 58 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 LCA10Q71F78 164 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 PCP2Q8IVA1 136 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 TOMM6Q96B49 74 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 LINC00167Q96N53 147 aa1.96□□□□□ -2.1
LIMA1-206ENST00000550611 IGKV2D-26A0A0A0MRZ7 120 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 A0A0B4J2C4 111 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 HIGD1CA8MV81 97 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 M0R378 163 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 RBM3P98179 157 aaKnown RBP1.95□□□□□ -2.1
LIMA1-206ENST00000550611 ATXN8Q156A1 80 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 MRPL51Q4U2R6 128 aaKnown RBP1.95□□□□□ -2.1
LIMA1-206ENST00000550611 FAM104BQ5XKR9 115 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 SPAG11AQ6PDA7 123 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 FAM19A3Q7Z5A8 133 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 LINC00337Q8N6G1 96 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 IFI27L1Q96BM0 104 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 TIMM17AQ99595 171 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 XAGE1AQ9HD64 81 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 OSTCQ9NRP0 149 aa1.95□□□□□ -2.1
LIMA1-206ENST00000550611 TRBV10-2A0A0K0K1G8 114 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 LOC389332A0A1B0GUA5 103 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 TMEM256-PLSCR3K7ERE1 68 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 K7ERJ3 54 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 ZNF73O43830 326 aaPredicted RBP1.94□□□□□ -2.1
LIMA1-206ENST00000550611 COX6CP09669 75 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 FXYD2P54710 66 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 Q8IZM0 81 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 NKAPP1Q8N9T2 125 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 LCE3DQ9BYE3 92 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
LIMA1-206ENST00000550611 F8VRH5 84 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 K7EMI3 77 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 M0R2T5 61 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 UBE2AP49459 152 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 AMELXQ99217 191 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 SMIM2Q9BVW6 85 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 V9GYV3 84 aa1.93□□□□□ -2.1
LIMA1-206ENST00000550611 SMIM27A0A1W2PRY6 76 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 IGIPA6NJ69 53 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 A8MUN3 132 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 LST1O00453 97 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 SPINK1P00995 79 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 CCKP06307 115 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 IFI27P40305 119 aaPredicted RBP1.92□□□□□ -2.1
LIMA1-206ENST00000550611 S100A7L2Q5SY68 101 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 ATP11AUNQ6ZP68 121 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 TMEM141Q96I45 108 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 TOMM7Q9P0U1 55 aa1.92□□□□□ -2.1
LIMA1-206ENST00000550611 IGKV2-28A0A075B6P5 120 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 D6R8Y8 96 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 IGKV2D-28P01615 120 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 RPS29P62273 56 aaKnown RBP1.91□□□□□ -2.1
LIMA1-206ENST00000550611 HIST1H4AP62805 103 aaKnown RBP1.91□□□□□ -2.1
LIMA1-206ENST00000550611 PRLHP81277 87 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 C6orf99Q4VX62 202 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 SFTA2Q6UW10 78 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 C7orf65Q6ZTY9 151 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 Q8N8P6 123 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 DAND5Q8N907 189 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 SPRR4Q96PI1 79 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 CDKN2A-AS1Q9UH64 79 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 PRO1854Q9UHT4 67 aa1.91□□□□□ -2.1
LIMA1-206ENST00000550611 TRAV7A0A075B6U4 112 aa1.9□□□□□ -2.11
LIMA1-206ENST00000550611 TRAV13-2A0A0B4J235 113 aa1.9□□□□□ -2.11
LIMA1-206ENST00000550611 TEX49A0A1B0GTD5 131 aa1.9□□□□□ -2.11
LIMA1-206ENST00000550611 ORMDL3Q8N138 153 aa1.9□□□□□ -2.11
LIMA1-206ENST00000550611 Q8NDZ9 215 aa1.9□□□□□ -2.11
LIMA1-206ENST00000550611 PSPHP1O15172 72 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 PLNP26678 52 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 LINC00313P59037 77 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 Q1T7F1 81 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 LINC00483Q53H64 154 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 PCOTHQ58A44 107 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 ATP5EP2Q5VTU8 51 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 Q6JHZ5 121 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 SSBP3-AS1Q7Z2R9 100 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 C20orf197Q8N268 126 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 COX7B2Q8TF08 81 aa1.89□□□□□ -2.11
LIMA1-206ENST00000550611 IGHV6-1A0A0B4J1U7 121 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 A0A1B0GW54 56 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 ZNF815PA8K554 130 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 SPRR1AP35321 89 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 LINC01554Q52M75 96 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 HIGD2AQ9BW72 106 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 SND1-IT1Q9HBX3 110 aa1.88□□□□□ -2.11
LIMA1-206ENST00000550611 ZNF706Q9Y5V0 76 aaPredicted RBP1.88□□□□□ -2.11
LIMA1-206ENST00000550611 TRBV10-3A0A0K0K1G6 114 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 TMEM223A0PJW6 202 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 H7BZZ5 65 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 ZNF22P17026 224 aaPredicted RBP1.87□□□□□ -2.11
LIMA1-206ENST00000550611 KLKP1Q107X0 134 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 CAMK2N1Q7Z7J9 78 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 SPTSSBQ8NFR3 76 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 SMCR5Q8TEV8 140 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 CLEC2BQ92478 149 aa1.87□□□□□ -2.11
LIMA1-206ENST00000550611 NDUFA12Q9UI09 145 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms