RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 NIPBLQ6KC79 2804 aaeCLIP5.14□□□□□ -1.59
PPFIA2-220ENST00000550584 LRRK2Q5S007 2527 aa5.14□□□□□ -1.59
PPFIA2-220ENST00000550584 NF1P21359 2839 aa5.13□□□□□ -1.59
PPFIA2-220ENST00000550584 MAST4O15021 2626 aa5.12□□□□□ -1.59
PPFIA2-220ENST00000550584 DNHD1Q96M86 4753 aa5.12□□□□□ -1.59
PPFIA2-220ENST00000550584 HIVEP2P31629 2446 aa5.11□□□□□ -1.59
PPFIA2-220ENST00000550584 M0QZ58 72 aa5.11□□□□□ -1.59
PPFIA2-220ENST00000550584 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
PPFIA2-220ENST00000550584 USP9YO00507 2555 aaPredicted RBP5.11□□□□□ -1.59
PPFIA2-220ENST00000550584 K7EIL1 84 aa5.1□□□□□ -1.59
PPFIA2-220ENST00000550584 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
PPFIA2-220ENST00000550584 PTPN13Q12923 2485 aa5.09□□□□□ -1.59
PPFIA2-220ENST00000550584 POLQO75417 2590 aa5.08□□□□□ -1.6
PPFIA2-220ENST00000550584 UNC79Q9P2D8 2635 aa5.07□□□□□ -1.6
PPFIA2-220ENST00000550584 ABCA12Q86UK0 2595 aa5.07□□□□□ -1.6
PPFIA2-220ENST00000550584 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
PPFIA2-220ENST00000550584 R4GN34 69 aa5.05□□□□□ -1.6
PPFIA2-220ENST00000550584 ANK2Q01484 3957 aa5.05□□□□□ -1.6
PPFIA2-220ENST00000550584 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
PPFIA2-220ENST00000550584 CSMD3Q7Z407 3707 aa5.04□□□□□ -1.6
PPFIA2-220ENST00000550584 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
PPFIA2-220ENST00000550584 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
PPFIA2-220ENST00000550584 SMR3AQ99954 134 aa5.04□□□□□ -1.6
PPFIA2-220ENST00000550584 DMBT1Q9UGM3 2413 aaPredicted RBP5.03□□□□□ -1.6
PPFIA2-220ENST00000550584 TEP1Q99973 2627 aaKnown RBP5.03□□□□□ -1.6
PPFIA2-220ENST00000550584 P0C880 135 aa5.02□□□□□ -1.61
PPFIA2-220ENST00000550584 MYO9AB2RTY4 2548 aa5.01□□□□□ -1.61
PPFIA2-220ENST00000550584 KRTAP10-3P60369 221 aa5□□□□□ -1.61
PPFIA2-220ENST00000550584 Q6ZSA8 131 aa5□□□□□ -1.61
PPFIA2-220ENST00000550584 FBN1P35555 2871 aaKnown RBP4.99□□□□□ -1.61
PPFIA2-220ENST00000550584 KRTAP24-1Q3LI83 254 aa4.99□□□□□ -1.61
PPFIA2-220ENST00000550584 HIVEP1P15822 2718 aa4.98□□□□□ -1.61
PPFIA2-220ENST00000550584 H0YAA0 97 aa4.95□□□□□ -1.62
PPFIA2-220ENST00000550584 ACANP16112 2415 aa4.95□□□□□ -1.62
PPFIA2-220ENST00000550584 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
PPFIA2-220ENST00000550584 TENM1Q9UKZ4 2725 aa4.94□□□□□ -1.62
PPFIA2-220ENST00000550584 SETD2Q9BYW2 2564 aaPredicted RBP4.94□□□□□ -1.62
PPFIA2-220ENST00000550584 PKD1L1Q8TDX9 2849 aa4.94□□□□□ -1.62
PPFIA2-220ENST00000550584 KRTAP13-1Q8IUC0 172 aa4.94□□□□□ -1.62
PPFIA2-220ENST00000550584 VWFP04275 2813 aa4.91□□□□□ -1.62
PPFIA2-220ENST00000550584 ITPR3Q14573 2671 aa4.9□□□□□ -1.63
PPFIA2-220ENST00000550584 NOTCH2Q04721 2471 aa4.89□□□□□ -1.63
PPFIA2-220ENST00000550584 KRTAP7-1Q8IUC3 87 aa4.87□□□□□ -1.63
PPFIA2-220ENST00000550584 MTORP42345 2549 aa4.87□□□□□ -1.63
PPFIA2-220ENST00000550584 FLNAP21333 2647 aaKnown RBP4.85□□□□□ -1.63
PPFIA2-220ENST00000550584 TLN2Q9Y4G6 2542 aa4.85□□□□□ -1.63
PPFIA2-220ENST00000550584 CCDC168Q8NDH2 2452 aa4.84□□□□□ -1.63
PPFIA2-220ENST00000550584 NSD1Q96L73 2696 aaPredicted RBP4.84□□□□□ -1.64
PPFIA2-220ENST00000550584 KRTAP1-3Q8IUG1 177 aa4.83□□□□□ -1.64
PPFIA2-220ENST00000550584 ANKRD17O75179 2603 aaKnown RBP4.83□□□□□ -1.64
PPFIA2-220ENST00000550584 C10orf95Q9H7T3 257 aa4.82□□□□□ -1.64
PPFIA2-220ENST00000550584 TNP1P09430 55 aa4.81□□□□□ -1.64
PPFIA2-220ENST00000550584 KRTAP1-1Q07627 177 aa4.8□□□□□ -1.64
PPFIA2-220ENST00000550584 LYSTQ99698 3801 aa4.78□□□□□ -1.64
PPFIA2-220ENST00000550584 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
PPFIA2-220ENST00000550584 KRTAP1-5Q9BYS1 174 aa4.76□□□□□ -1.65
PPFIA2-220ENST00000550584 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
PPFIA2-220ENST00000550584 FN1P02751 2386 aaKnown RBP4.75□□□□□ -1.65
PPFIA2-220ENST00000550584 COL7A1Q02388 2944 aa4.74□□□□□ -1.65
PPFIA2-220ENST00000550584 INE1O15225 51 aa4.74□□□□□ -1.65
PPFIA2-220ENST00000550584 Q6ZRN7 208 aaPredicted RBP4.73□□□□□ -1.65
PPFIA2-220ENST00000550584 NBEAL1Q6ZS30 2694 aa4.71□□□□□ -1.65
PPFIA2-220ENST00000550584 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.65
PPFIA2-220ENST00000550584 MEGF8Q7Z7M0 2845 aa4.7□□□□□ -1.66
PPFIA2-220ENST00000550584 STAB1Q9NY15 2570 aa4.68□□□□□ -1.66
PPFIA2-220ENST00000550584 ATRQ13535 2644 aa4.68□□□□□ -1.66
PPFIA2-220ENST00000550584 SMR3BP02814 79 aaPredicted RBP4.67□□□□□ -1.66
PPFIA2-220ENST00000550584 KRTAP13-2Q52LG2 175 aa4.67□□□□□ -1.66
PPFIA2-220ENST00000550584 DNAH3Q8TD57 4116 aa4.67□□□□□ -1.66
PPFIA2-220ENST00000550584 COL6A5A8TX70 2615 aa4.66□□□□□ -1.66
PPFIA2-220ENST00000550584 JMJD1CQ15652 2540 aa4.65□□□□□ -1.67
PPFIA2-220ENST00000550584 TPRXLQ17RH7 258 aa4.65□□□□□ -1.67
PPFIA2-220ENST00000550584 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
PPFIA2-220ENST00000550584 DNAH7Q8WXX0 4024 aa4.64□□□□□ -1.67
PPFIA2-220ENST00000550584 TGP01266 2768 aa4.63□□□□□ -1.67
PPFIA2-220ENST00000550584 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
PPFIA2-220ENST00000550584 KMT2CQ8NEZ4 4911 aaKnown RBP4.59□□□□□ -1.67
PPFIA2-220ENST00000550584 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
PPFIA2-220ENST00000550584 KRTAP10-1P60331 282 aa4.58□□□□□ -1.68
PPFIA2-220ENST00000550584 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
PPFIA2-220ENST00000550584 RYR3Q15413 4870 aa4.52□□□□□ -1.69
PPFIA2-220ENST00000550584 FBN3Q75N90 2809 aa4.52□□□□□ -1.69
PPFIA2-220ENST00000550584 NOTCH1P46531 2555 aa4.51□□□□□ -1.69
PPFIA2-220ENST00000550584 HYDINQ4G0P3 5121 aa4.49□□□□□ -1.69
PPFIA2-220ENST00000550584 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
PPFIA2-220ENST00000550584 KRTAP12-2P59991 146 aa4.48□□□□□ -1.69
PPFIA2-220ENST00000550584 TENM2Q9NT68 2774 aa4.47□□□□□ -1.69
PPFIA2-220ENST00000550584 Q5VSD8 79 aa4.47□□□□□ -1.69
PPFIA2-220ENST00000550584 DNAH9Q9NYC9 4486 aa4.47□□□□□ -1.69
PPFIA2-220ENST00000550584 XP32Q5T750 250 aa4.47□□□□□ -1.69
PPFIA2-220ENST00000550584 STARD9Q9P2P6 4700 aa4.46□□□□□ -1.7
PPFIA2-220ENST00000550584 M0R2T5 61 aa4.46□□□□□ -1.7
PPFIA2-220ENST00000550584 KRTAP12-1P59990 96 aa4.46□□□□□ -1.7
PPFIA2-220ENST00000550584 NBEAL2Q6ZNJ1 2754 aa4.46□□□□□ -1.7
PPFIA2-220ENST00000550584 KMT2AQ03164 3969 aa4.45□□□□□ -1.7
PPFIA2-220ENST00000550584 HUWE1Q7Z6Z7 4374 aaKnown RBP4.42□□□□□ -1.7
PPFIA2-220ENST00000550584 TENM3Q9P273 2699 aa4.42□□□□□ -1.7
PPFIA2-220ENST00000550584 MGAM2Q2M2H8 2515 aa4.42□□□□□ -1.7
PPFIA2-220ENST00000550584 KRTAP1-4P0C5Y4 121 aa4.41□□□□□ -1.7
PPFIA2-220ENST00000550584 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms