RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 A0A0U1RQV1 116 aa12.18□□□□□ -0.46
PRDM4-205ENST00000550376 hDV103S1A0JD37 113 aa12.15□□□□□ -0.46
PRDM4-205ENST00000550376 CDK2AP2O75956 126 aa12.15□□□□□ -0.47
PRDM4-205ENST00000550376 A0A1B0GVX0 72 aa12.13□□□□□ -0.47
PRDM4-205ENST00000550376 C8orf17Q9NRJ1 99 aa12.13□□□□□ -0.47
PRDM4-205ENST00000550376 FAM229BQ4G0N7 80 aa12.12□□□□□ -0.47
PRDM4-205ENST00000550376 FP248Q71RG6 208 aaPredicted RBP12.11□□□□□ -0.47
PRDM4-205ENST00000550376 CD164Q04900 197 aa12.1□□□□□ -0.47
PRDM4-205ENST00000550376 PRR26Q8N8Z3 221 aa12.1□□□□□ -0.47
PRDM4-205ENST00000550376 TYMSOSQ8TAI1 123 aa12.08□□□□□ -0.48
PRDM4-205ENST00000550376 SMIM26A0A096LP01 95 aa12.05□□□□□ -0.48
PRDM4-205ENST00000550376 NDUFS5O43920 106 aa12.05□□□□□ -0.48
PRDM4-205ENST00000550376 LINC00208Q96KT6 92 aa12.04□□□□□ -0.48
PRDM4-205ENST00000550376 C1orf195Q5TG92 126 aa12.03□□□□□ -0.48
PRDM4-205ENST00000550376 KRTAP10-4P60372 401 aaPredicted RBP12.02□□□□□ -0.48
PRDM4-205ENST00000550376 ASB16-AS1Q495Z4 193 aa12.02□□□□□ -0.49
PRDM4-205ENST00000550376 PRO0628Q9UI54 55 aa12.02□□□□□ -0.49
PRDM4-205ENST00000550376 H0Y9P7 68 aa12.01□□□□□ -0.49
PRDM4-205ENST00000550376 ZCCHC13Q8WW36 166 aaKnown RBP12.01□□□□□ -0.49
PRDM4-205ENST00000550376 NDUFC1O43677 76 aa12□□□□□ -0.49
PRDM4-205ENST00000550376 MP68P56378 58 aa11.98□□□□□ -0.49
PRDM4-205ENST00000550376 C4orf48Q5BLP8 95 aa11.98□□□□□ -0.49
PRDM4-205ENST00000550376 MRPL34Q9BQ48 92 aaKnown RBP11.97□□□□□ -0.49
PRDM4-205ENST00000550376 PRR4Q16378 134 aa11.96□□□□□ -0.49
PRDM4-205ENST00000550376 HSPG2P98160 4391 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 ATP5EP56381 51 aaPredicted RBP11.92□□□□□ -0.5
PRDM4-205ENST00000550376 C1orf64Q8NEQ6 169 aa11.92□□□□□ -0.5
PRDM4-205ENST00000550376 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
PRDM4-205ENST00000550376 LRP1Q07954 4544 aaKnown RBP11.91□□□□□ -0.5
PRDM4-205ENST00000550376 LINC00304Q8N9R0 145 aa11.89□□□□□ -0.51
PRDM4-205ENST00000550376 LINC00313P59037 77 aa11.88□□□□□ -0.51
PRDM4-205ENST00000550376 LIMD2Q9BT23 127 aa11.88□□□□□ -0.51
PRDM4-205ENST00000550376 BRK1Q8WUW1 75 aa11.87□□□□□ -0.51
PRDM4-205ENST00000550376 SPINK1P00995 79 aa11.87□□□□□ -0.51
PRDM4-205ENST00000550376 Q5W150 140 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 KIAA1109Q2LD37 5005 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 PKHD1L1Q86WI1 4243 aa11.86□□□□□ -0.51
PRDM4-205ENST00000550376 RETNLBQ9BQ08 111 aa11.85□□□□□ -0.51
PRDM4-205ENST00000550376 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
PRDM4-205ENST00000550376 PCOTHQ58A44 107 aa11.82□□□□□ -0.52
PRDM4-205ENST00000550376 KRTAP17-1Q9BYP8 105 aa11.82□□□□□ -0.52
PRDM4-205ENST00000550376 EPPK1P58107 5090 aaKnown RBP11.82□□□□□ -0.52
PRDM4-205ENST00000550376 RYR1P21817 5038 aa11.81□□□□□ -0.52
PRDM4-205ENST00000550376 FLG2Q5D862 2391 aaPredicted RBP11.8□□□□□ -0.52
PRDM4-205ENST00000550376 C8orf87E5RJ46 101 aa11.79□□□□□ -0.52
PRDM4-205ENST00000550376 FAM229AH3BQW9 127 aa11.77□□□□□ -0.53
PRDM4-205ENST00000550376 H3BPC8 53 aa11.75□□□□□ -0.53
PRDM4-205ENST00000550376 Q5VSD8 79 aa11.75□□□□□ -0.53
PRDM4-205ENST00000550376 KRTAP16-1A8MUX0 517 aa11.74□□□□□ -0.53
PRDM4-205ENST00000550376 SPAG11AQ6PDA7 123 aa11.71□□□□□ -0.53
PRDM4-205ENST00000550376 KRTAP13-3Q3SY46 172 aa11.7□□□□□ -0.54
PRDM4-205ENST00000550376 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
PRDM4-205ENST00000550376 Q8N9P0 234 aaPredicted RBP11.69□□□□□ -0.54
PRDM4-205ENST00000550376 TNXBP22105 4242 aa11.66□□□□□ -0.54
PRDM4-205ENST00000550376 C9orf92A6NGG3 77 aa11.66□□□□□ -0.54
PRDM4-205ENST00000550376 DMBT1Q9UGM3 2413 aaPredicted RBP11.66□□□□□ -0.54
PRDM4-205ENST00000550376 Q8N1X5 172 aa11.64□□□□□ -0.55
PRDM4-205ENST00000550376 RPS29P62273 56 aaKnown RBP11.63□□□□□ -0.55
PRDM4-205ENST00000550376 CYP4F30PQ9H0H9 118 aa11.61□□□□□ -0.55
PRDM4-205ENST00000550376 SPANXA2-OT1Q8N9U9 137 aa11.58□□□□□ -0.56
PRDM4-205ENST00000550376 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 FAT3Q8TDW7 4589 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 LOC101927531A0A1B0GV80 90 aa11.56□□□□□ -0.56
PRDM4-205ENST00000550376 PSPHP1O15172 72 aa11.54□□□□□ -0.56
PRDM4-205ENST00000550376 Q1T7F1 81 aa11.54□□□□□ -0.56
PRDM4-205ENST00000550376 KRTAP10-8P60410 259 aa11.52□□□□□ -0.56
PRDM4-205ENST00000550376 V9GYY9 64 aa11.52□□□□□ -0.56
PRDM4-205ENST00000550376 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
PRDM4-205ENST00000550376 IGKV2-30P06310 120 aa11.51□□□□□ -0.57
PRDM4-205ENST00000550376 HRES1P13985 223 aa11.46□□□□□ -0.58
PRDM4-205ENST00000550376 COA5Q86WW8 74 aa11.43□□□□□ -0.58
PRDM4-205ENST00000550376 A8MUN3 132 aa11.4□□□□□ -0.58
PRDM4-205ENST00000550376 SEC61GP60059 68 aa11.4□□□□□ -0.58
PRDM4-205ENST00000550376 KRTAP4-5Q9BYR2 181 aa11.37□□□□□ -0.59
PRDM4-205ENST00000550376 A8MU10 97 aa11.36□□□□□ -0.59
PRDM4-205ENST00000550376 MT1HL1P0DM35 61 aa11.34□□□□□ -0.59
PRDM4-205ENST00000550376 PMAIP1Q13794 54 aa11.34□□□□□ -0.59
PRDM4-205ENST00000550376 C20orf166-AS1Q96NR2 134 aa11.33□□□□□ -0.6
PRDM4-205ENST00000550376 A8MUU9 505 aa11.32□□□□□ -0.6
PRDM4-205ENST00000550376 Q5VV11 94 aa11.3□□□□□ -0.6
PRDM4-205ENST00000550376 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
PRDM4-205ENST00000550376 C7orf65Q6ZTY9 151 aa11.23□□□□□ -0.61
PRDM4-205ENST00000550376 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
PRDM4-205ENST00000550376 CHKB-CPT1BH3BT56 60 aa11.22□□□□□ -0.61
PRDM4-205ENST00000550376 ACYP2P14621 99 aa11.22□□□□□ -0.61
PRDM4-205ENST00000550376 PRR15LQ9BU68 103 aa11.2□□□□□ -0.62
PRDM4-205ENST00000550376 SPINK7P58062 85 aa11.15□□□□□ -0.62
PRDM4-205ENST00000550376 Q75L30 129 aa11.15□□□□□ -0.62
PRDM4-205ENST00000550376 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 LPAP08519 4548 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 XP32Q5T750 250 aa11.11□□□□□ -0.63
PRDM4-205ENST00000550376 LCA10Q71F78 164 aa11.09□□□□□ -0.63
PRDM4-205ENST00000550376 LRP2P98164 4655 aa11.08□□□□□ -0.64
PRDM4-205ENST00000550376 HERC2O95714 4834 aa11.07□□□□□ -0.64
PRDM4-205ENST00000550376 ATP11AUNQ6ZP68 121 aa11.07□□□□□ -0.64
PRDM4-205ENST00000550376 A6NED7 52 aa11.06□□□□□ -0.64
PRDM4-205ENST00000550376 KRTAP3-1Q9BYR8 98 aa11.02□□□□□ -0.65
PRDM4-205ENST00000550376 RPL37P61927 97 aaKnown RBP11.02□□□□□ -0.65
PRDM4-205ENST00000550376 LINC01558Q9Y6Z2 57 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms