RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 A0A087X002 238 aa5.19□□□□□ -1.58
TMEM116-209ENST00000550020 KRTAP13-2Q52LG2 175 aa5.19□□□□□ -1.58
TMEM116-209ENST00000550020 TENM2Q9NT68 2774 aa5.18□□□□□ -1.58
TMEM116-209ENST00000550020 KRTAP1-4P0C5Y4 121 aa5.18□□□□□ -1.58
TMEM116-209ENST00000550020 PCOTHQ58A44 107 aa5.17□□□□□ -1.58
TMEM116-209ENST00000550020 PLECQ15149 4684 aaKnown RBP5.17□□□□□ -1.58
TMEM116-209ENST00000550020 DNAH10Q8IVF4 4471 aa5.16□□□□□ -1.58
TMEM116-209ENST00000550020 NOTCH2NLQ7Z3S9 236 aa5.16□□□□□ -1.58
TMEM116-209ENST00000550020 Q8N9P0 234 aaPredicted RBP5.16□□□□□ -1.58
TMEM116-209ENST00000550020 PRO0628Q9UI54 55 aa5.16□□□□□ -1.58
TMEM116-209ENST00000550020 STARD9Q9P2P6 4700 aa5.15□□□□□ -1.59
TMEM116-209ENST00000550020 COA5Q86WW8 74 aa5.14□□□□□ -1.59
TMEM116-209ENST00000550020 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
TMEM116-209ENST00000550020 LINC00304Q8N9R0 145 aa5.13□□□□□ -1.59
TMEM116-209ENST00000550020 FBN3Q75N90 2809 aa5.12□□□□□ -1.59
TMEM116-209ENST00000550020 KRTAP13-3Q3SY46 172 aa5.12□□□□□ -1.59
TMEM116-209ENST00000550020 PRKDCP78527 4128 aaKnown RBP5.11□□□□□ -1.59
TMEM116-209ENST00000550020 ACYP2P14621 99 aa5.11□□□□□ -1.59
TMEM116-209ENST00000550020 Q5W150 140 aa5.1□□□□□ -1.59
TMEM116-209ENST00000550020 BRK1Q8WUW1 75 aa5.1□□□□□ -1.59
TMEM116-209ENST00000550020 DNAH7Q8WXX0 4024 aa5.1□□□□□ -1.59
TMEM116-209ENST00000550020 DNAH17Q9UFH2 4485 aa5.1□□□□□ -1.59
TMEM116-209ENST00000550020 A0A1B0GVY2 172 aa5.08□□□□□ -1.6
TMEM116-209ENST00000550020 KRTAP16-1A8MUX0 517 aa5.08□□□□□ -1.6
TMEM116-209ENST00000550020 IGKV2-30P06310 120 aa5.08□□□□□ -1.6
TMEM116-209ENST00000550020 ALMS1Q8TCU4 4167 aa5.08□□□□□ -1.6
TMEM116-209ENST00000550020 LYSTQ99698 3801 aa5.08□□□□□ -1.6
TMEM116-209ENST00000550020 SRRM2Q9UQ35 2752 aaKnown RBP5.07□□□□□ -1.6
TMEM116-209ENST00000550020 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
TMEM116-209ENST00000550020 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
TMEM116-209ENST00000550020 PSPHP1O15172 72 aa5.06□□□□□ -1.6
TMEM116-209ENST00000550020 HRES1P13985 223 aa5.06□□□□□ -1.6
TMEM116-209ENST00000550020 CHKB-CPT1BH3BT56 60 aa5.05□□□□□ -1.6
TMEM116-209ENST00000550020 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
TMEM116-209ENST00000550020 TGP01266 2768 aa5.04□□□□□ -1.6
TMEM116-209ENST00000550020 A8MUN3 132 aa5.04□□□□□ -1.6
TMEM116-209ENST00000550020 PRR15LQ9BU68 103 aa5.04□□□□□ -1.6
TMEM116-209ENST00000550020 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
TMEM116-209ENST00000550020 Q75L30 129 aa5.03□□□□□ -1.6
TMEM116-209ENST00000550020 SMR3BP02814 79 aaPredicted RBP5.02□□□□□ -1.61
TMEM116-209ENST00000550020 DNHD1Q96M86 4753 aa5.02□□□□□ -1.61
TMEM116-209ENST00000550020 Q5VV11 94 aa5.01□□□□□ -1.61
TMEM116-209ENST00000550020 DNAH2Q9P225 4427 aa5□□□□□ -1.61
TMEM116-209ENST00000550020 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
TMEM116-209ENST00000550020 RETNLBQ9BQ08 111 aa5□□□□□ -1.61
TMEM116-209ENST00000550020 IGKV2D-30A0A075B6S6 120 aa4.99□□□□□ -1.61
TMEM116-209ENST00000550020 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
TMEM116-209ENST00000550020 A6NED7 52 aa4.97□□□□□ -1.61
TMEM116-209ENST00000550020 DNAH8Q96JB1 4490 aa4.97□□□□□ -1.61
TMEM116-209ENST00000550020 SPTSSBQ8NFR3 76 aa4.96□□□□□ -1.62
TMEM116-209ENST00000550020 KMT2AQ03164 3969 aa4.95□□□□□ -1.62
TMEM116-209ENST00000550020 A8MUU9 505 aa4.95□□□□□ -1.62
TMEM116-209ENST00000550020 C20orf166-AS1Q96NR2 134 aa4.95□□□□□ -1.62
TMEM116-209ENST00000550020 HECTD4Q9Y4D8 3996 aa4.94□□□□□ -1.62
TMEM116-209ENST00000550020 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
TMEM116-209ENST00000550020 A0A1B0GU69 56 aa4.91□□□□□ -1.62
TMEM116-209ENST00000550020 ATP11AUNQ6ZP68 121 aa4.91□□□□□ -1.62
TMEM116-209ENST00000550020 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.63
TMEM116-209ENST00000550020 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
TMEM116-209ENST00000550020 Q5VSD8 79 aa4.88□□□□□ -1.63
TMEM116-209ENST00000550020 KRTAP3-3Q9BYR6 98 aa4.88□□□□□ -1.63
TMEM116-209ENST00000550020 KRTAP3-2Q9BYR7 98 aa4.88□□□□□ -1.63
TMEM116-209ENST00000550020 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
TMEM116-209ENST00000550020 PKD1P98161 4303 aa4.87□□□□□ -1.63
TMEM116-209ENST00000550020 SEC61GP60059 68 aa4.87□□□□□ -1.63
TMEM116-209ENST00000550020 KRTAP10-8P60410 259 aa4.86□□□□□ -1.63
TMEM116-209ENST00000550020 FRAS1Q86XX4 4008 aa4.86□□□□□ -1.63
TMEM116-209ENST00000550020 FAT2Q9NYQ8 4349 aa4.85□□□□□ -1.63
TMEM116-209ENST00000550020 LRP1BQ9NZR2 4599 aa4.85□□□□□ -1.63
TMEM116-209ENST00000550020 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
TMEM116-209ENST00000550020 LCA10Q71F78 164 aa4.84□□□□□ -1.63
TMEM116-209ENST00000550020 SPINK7P58062 85 aa4.83□□□□□ -1.64
TMEM116-209ENST00000550020 UQCR11O14957 56 aa4.82□□□□□ -1.64
TMEM116-209ENST00000550020 Q8N1X5 172 aa4.82□□□□□ -1.64
TMEM116-209ENST00000550020 HYDINQ4G0P3 5121 aa4.82□□□□□ -1.64
TMEM116-209ENST00000550020 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
TMEM116-209ENST00000550020 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
TMEM116-209ENST00000550020 RPL37P61927 97 aaKnown RBP4.77□□□□□ -1.65
TMEM116-209ENST00000550020 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
TMEM116-209ENST00000550020 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
TMEM116-209ENST00000550020 LOC100996750A0A140TA64 210 aa4.73□□□□□ -1.65
TMEM116-209ENST00000550020 A6NN06 94 aa4.73□□□□□ -1.65
TMEM116-209ENST00000550020 A8MU10 97 aa4.73□□□□□ -1.65
TMEM116-209ENST00000550020 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
TMEM116-209ENST00000550020 SACSQ9NZJ4 4579 aa4.73□□□□□ -1.65
TMEM116-209ENST00000550020 VPS13BQ7Z7G8 4022 aa4.72□□□□□ -1.65
TMEM116-209ENST00000550020 DYNC1H1Q14204 4646 aaKnown RBP4.72□□□□□ -1.65
TMEM116-209ENST00000550020 XP32Q5T750 250 aa4.71□□□□□ -1.66
TMEM116-209ENST00000550020 RYR2Q92736 4967 aa4.7□□□□□ -1.66
TMEM116-209ENST00000550020 KRTAP3-1Q9BYR8 98 aa4.69□□□□□ -1.66
TMEM116-209ENST00000550020 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
TMEM116-209ENST00000550020 FLG2Q5D862 2391 aaPredicted RBP4.67□□□□□ -1.66
TMEM116-209ENST00000550020 A0A1B0GU33 70 aa4.66□□□□□ -1.66
TMEM116-209ENST00000550020 TPRXLQ17RH7 258 aa4.66□□□□□ -1.66
TMEM116-209ENST00000550020 APOBP04114 4563 aaKnown RBP4.66□□□□□ -1.66
TMEM116-209ENST00000550020 PKHD1P08F94 4074 aa4.65□□□□□ -1.67
TMEM116-209ENST00000550020 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
TMEM116-209ENST00000550020 S4R3F8 94 aa4.62□□□□□ -1.67
TMEM116-209ENST00000550020 K7ERS5 55 aa4.61□□□□□ -1.67
TMEM116-209ENST00000550020 PKHD1L1Q86WI1 4243 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms