RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 MIR7-3HGQ8N6C7 128 aa4□□□□□ -1.77
NPAS3-207ENST00000549770 C7orf33Q8WU49 177 aa4□□□□□ -1.77
NPAS3-207ENST00000549770 TNXBP22105 4242 aa3.99□□□□□ -1.77
NPAS3-207ENST00000549770 LOC101927531A0A1B0GV80 90 aa3.99□□□□□ -1.77
NPAS3-207ENST00000549770 KRTAP29-1A8MX34 341 aaPredicted RBP3.99□□□□□ -1.77
NPAS3-207ENST00000549770 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
NPAS3-207ENST00000549770 LINC01554Q52M75 96 aa3.99□□□□□ -1.77
NPAS3-207ENST00000549770 C9orf129Q5T035 196 aaKnown RBP3.99□□□□□ -1.77
NPAS3-207ENST00000549770 UNQ6190/PRO20217Q6UXQ8 127 aa3.99□□□□□ -1.77
NPAS3-207ENST00000549770 A0A1W2PNN7 141 aa3.98□□□□□ -1.77
NPAS3-207ENST00000549770 H0Y9J4 135 aa3.98□□□□□ -1.77
NPAS3-207ENST00000549770 C9orf116Q5BN46 136 aaPredicted RBP3.98□□□□□ -1.77
NPAS3-207ENST00000549770 ZCCHC13Q8WW36 166 aaKnown RBP3.98□□□□□ -1.77
NPAS3-207ENST00000549770 Q9BRP9 147 aa3.98□□□□□ -1.77
NPAS3-207ENST00000549770 FAM168BA1KXE4 195 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 NCR3O14931 201 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 LINC00313P59037 77 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 PRR3P79522 188 aaKnown RBP3.97□□□□□ -1.77
NPAS3-207ENST00000549770 Q6ZQT0 140 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 C1orf64Q8NEQ6 169 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 TOMM7Q9P0U1 55 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 C6orf48Q9UBA6 75 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 CDKN2A-AS1Q9UH64 79 aa3.97□□□□□ -1.77
NPAS3-207ENST00000549770 BPY2O14599 106 aa3.96□□□□□ -1.78
NPAS3-207ENST00000549770 HCG22E2RYF7 251 aa3.95□□□□□ -1.78
NPAS3-207ENST00000549770 PSPHP1O15172 72 aa3.95□□□□□ -1.78
NPAS3-207ENST00000549770 NDUFB1O75438 58 aa3.95□□□□□ -1.78
NPAS3-207ENST00000549770 MP68P56378 58 aa3.95□□□□□ -1.78
NPAS3-207ENST00000549770 LINC00337Q8N6G1 96 aa3.94□□□□□ -1.78
NPAS3-207ENST00000549770 PSORS1C2Q9UIG4 136 aa3.94□□□□□ -1.78
NPAS3-207ENST00000549770 UBR4Q5T4S7 5183 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 SMIM1B2RUZ4 78 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 TLX1NBP0CAT3 122 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 C1orf137Q5JT78 98 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 NOTCH2NLQ7Z3S9 236 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 KRTAP7-1Q8IUC3 87 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 Q8IZM0 81 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 SPANXA2-OT1Q8N9U9 137 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 SMIM11BQ8TCY0 68 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 XAGE1AQ9HD64 81 aa3.93□□□□□ -1.78
NPAS3-207ENST00000549770 IGKV2-28A0A075B6P5 120 aa3.92□□□□□ -1.78
NPAS3-207ENST00000549770 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
NPAS3-207ENST00000549770 CHKB-CPT1BH3BT56 60 aa3.92□□□□□ -1.78
NPAS3-207ENST00000549770 IGKV2D-28P01615 120 aa3.92□□□□□ -1.78
NPAS3-207ENST00000549770 COX7B2Q8TF08 81 aa3.92□□□□□ -1.78
NPAS3-207ENST00000549770 Q8N9P0 234 aaPredicted RBP3.91□□□□□ -1.78
NPAS3-207ENST00000549770 LRP2P98164 4655 aa3.9□□□□□ -1.78
NPAS3-207ENST00000549770 A8MU10 97 aa3.9□□□□□ -1.79
NPAS3-207ENST00000549770 IGKV4-1P06312 121 aa3.9□□□□□ -1.79
NPAS3-207ENST00000549770 SPINK6Q6UWN8 80 aa3.9□□□□□ -1.79
NPAS3-207ENST00000549770 CASC2Q6XLA1 102 aa3.9□□□□□ -1.79
NPAS3-207ENST00000549770 SND1-IT1Q9HBX3 110 aa3.9□□□□□ -1.79
NPAS3-207ENST00000549770 MOBPQ13875 183 aa3.89□□□□□ -1.79
NPAS3-207ENST00000549770 REG3GQ6UW15 175 aa3.89□□□□□ -1.79
NPAS3-207ENST00000549770 SPTSSBQ8NFR3 76 aa3.89□□□□□ -1.79
NPAS3-207ENST00000549770 A0A1B0GW54 56 aa3.88□□□□□ -1.79
NPAS3-207ENST00000549770 A6NED7 52 aa3.88□□□□□ -1.79
NPAS3-207ENST00000549770 IGLV7-43P04211 117 aa3.88□□□□□ -1.79
NPAS3-207ENST00000549770 RPL37AP8A6NKH3 93 aa3.87□□□□□ -1.79
NPAS3-207ENST00000549770 PRR15LQ9BU68 103 aa3.87□□□□□ -1.79
NPAS3-207ENST00000549770 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
NPAS3-207ENST00000549770 H3BPC8 53 aa3.86□□□□□ -1.79
NPAS3-207ENST00000549770 KRTAP10-8P60410 259 aa3.86□□□□□ -1.79
NPAS3-207ENST00000549770 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
NPAS3-207ENST00000549770 LPAP08519 4548 aa3.86□□□□□ -1.79
NPAS3-207ENST00000549770 KCNQ1DNQ9H478 68 aa3.85□□□□□ -1.79
NPAS3-207ENST00000549770 COX7BP24311 80 aa3.84□□□□□ -1.79
NPAS3-207ENST00000549770 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
NPAS3-207ENST00000549770 IGHV6-1A0A0B4J1U7 121 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 ZNF861PO60384 105 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 LINC00158P58513 81 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 C6orf99Q4VX62 202 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 Q8NDZ9 215 aa3.83□□□□□ -1.8
NPAS3-207ENST00000549770 IGLV5-37A0A075B6J1 123 aa3.82□□□□□ -1.8
NPAS3-207ENST00000549770 ETDCA0A1B0GVM5 59 aa3.82□□□□□ -1.8
NPAS3-207ENST00000549770 COX17Q14061 63 aa3.81□□□□□ -1.8
NPAS3-207ENST00000549770 LINC00575Q6W349 94 aa3.81□□□□□ -1.8
NPAS3-207ENST00000549770 RETNLBQ9BQ08 111 aa3.81□□□□□ -1.8
NPAS3-207ENST00000549770 IGLV1-50A0A075B6I6 118 aa3.8□□□□□ -1.8
NPAS3-207ENST00000549770 PRLHP81277 87 aa3.8□□□□□ -1.8
NPAS3-207ENST00000549770 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
NPAS3-207ENST00000549770 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.79□□□□□ -1.8
NPAS3-207ENST00000549770 SMIM29Q86T20 159 aa3.79□□□□□ -1.8
NPAS3-207ENST00000549770 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
NPAS3-207ENST00000549770 KRTAP13-1Q8IUC0 172 aa3.78□□□□□ -1.8
NPAS3-207ENST00000549770 SEC61BP60468 96 aaKnown RBP3.77□□□□□ -1.81
NPAS3-207ENST00000549770 ZNF706Q9Y5V0 76 aaPredicted RBP3.77□□□□□ -1.81
NPAS3-207ENST00000549770 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
NPAS3-207ENST00000549770 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
NPAS3-207ENST00000549770 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
NPAS3-207ENST00000549770 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
NPAS3-207ENST00000549770 PRR4Q16378 134 aa3.74□□□□□ -1.81
NPAS3-207ENST00000549770 COA5Q86WW8 74 aa3.74□□□□□ -1.81
NPAS3-207ENST00000549770 A0A1W2PNM2 257 aa3.73□□□□□ -1.81
NPAS3-207ENST00000549770 Q6ZQY7 126 aa3.73□□□□□ -1.81
NPAS3-207ENST00000549770 H0Y9P7 68 aa3.72□□□□□ -1.81
NPAS3-207ENST00000549770 KRTAP4-16G5E9R7 235 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms