RNA–Protein interactions for RNA: ENST00000549766.5

TGFBR1-207, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 5

Gene TGFBR1, Length 1,678 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-207ENST00000549766 LINC00304Q8N9R0 145 aa14.08□□□□□ -0.16
TGFBR1-207ENST00000549766 A0A1B0GVX0 72 aa14.07□□□□□ -0.16
TGFBR1-207ENST00000549766 RPS29P62273 56 aaKnown RBP14.07□□□□□ -0.16
TGFBR1-207ENST00000549766 SPAG11AQ6PDA7 123 aa14.07□□□□□ -0.16
TGFBR1-207ENST00000549766 OCR1Q9BZK8 76 aa14.07□□□□□ -0.16
TGFBR1-207ENST00000549766 MMP24-AS1A0A0U1RRL7 71 aa14.06□□□□□ -0.16
TGFBR1-207ENST00000549766 C1orf195Q5TG92 126 aa14.06□□□□□ -0.16
TGFBR1-207ENST00000549766 WFDC13Q8IUB5 93 aa14.04□□□□□ -0.16
TGFBR1-207ENST00000549766 CASC2Q6XLA1 102 aa14.02□□□□□ -0.16
TGFBR1-207ENST00000549766 C8orf17Q9NRJ1 99 aa14.01□□□□□ -0.17
TGFBR1-207ENST00000549766 Q8N1X5 172 aa14□□□□□ -0.17
TGFBR1-207ENST00000549766 IGHV6-1A0A0B4J1U7 121 aa13.99□□□□□ -0.17
TGFBR1-207ENST00000549766 hDV103S1A0JD37 113 aa13.96□□□□□ -0.17
TGFBR1-207ENST00000549766 ABCA13Q86UQ4 5058 aa13.96□□□□□ -0.17
TGFBR1-207ENST00000549766 NOTCH2NLQ7Z3S9 236 aa13.94□□□□□ -0.18
TGFBR1-207ENST00000549766 KRTAP10-8P60410 259 aa13.91□□□□□ -0.18
TGFBR1-207ENST00000549766 C8orf87E5RJ46 101 aa13.88□□□□□ -0.19
TGFBR1-207ENST00000549766 C20orf197Q8N268 126 aa13.86□□□□□ -0.19
TGFBR1-207ENST00000549766 TMEM254Q8TBM7 123 aa13.86□□□□□ -0.19
TGFBR1-207ENST00000549766 LRP1Q07954 4544 aaKnown RBP13.86□□□□□ -0.19
TGFBR1-207ENST00000549766 TNXBP22105 4242 aa13.86□□□□□ -0.19
TGFBR1-207ENST00000549766 KRTAP4-5Q9BYR2 181 aa13.85□□□□□ -0.19
TGFBR1-207ENST00000549766 MRPL34Q9BQ48 92 aaKnown RBP13.84□□□□□ -0.19
TGFBR1-207ENST00000549766 FAT3Q8TDW7 4589 aa13.83□□□□□ -0.19
TGFBR1-207ENST00000549766 CYSTM1Q9H1C7 97 aa13.83□□□□□ -0.2
TGFBR1-207ENST00000549766 KLKP1Q107X0 134 aa13.82□□□□□ -0.2
TGFBR1-207ENST00000549766 LINC00313P59037 77 aa13.79□□□□□ -0.2
TGFBR1-207ENST00000549766 C5orf47Q569G3 176 aa13.79□□□□□ -0.2
TGFBR1-207ENST00000549766 A0A0U1RQV1 116 aa13.76□□□□□ -0.21
TGFBR1-207ENST00000549766 TP53AIP1Q9HCN2 124 aa13.75□□□□□ -0.21
TGFBR1-207ENST00000549766 SNURFQ9Y675 71 aa13.74□□□□□ -0.21
TGFBR1-207ENST00000549766 KRTAP16-1A8MUX0 517 aa13.72□□□□□ -0.21
TGFBR1-207ENST00000549766 FLG2Q5D862 2391 aaPredicted RBP13.7□□□□□ -0.22
TGFBR1-207ENST00000549766 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
TGFBR1-207ENST00000549766 Q8N9P0 234 aaPredicted RBP13.68□□□□□ -0.22
TGFBR1-207ENST00000549766 NDUFS5O43920 106 aa13.67□□□□□ -0.22
TGFBR1-207ENST00000549766 ZCCHC13Q8WW36 166 aaKnown RBP13.67□□□□□ -0.22
TGFBR1-207ENST00000549766 H7BZZ5 65 aa13.65□□□□□ -0.22
TGFBR1-207ENST00000549766 MP68P56378 58 aa13.65□□□□□ -0.22
TGFBR1-207ENST00000549766 TRAV22A0A0B4J277 110 aa13.64□□□□□ -0.23
TGFBR1-207ENST00000549766 H0Y9P7 68 aa13.64□□□□□ -0.23
TGFBR1-207ENST00000549766 NDUFC1O43677 76 aa13.63□□□□□ -0.23
TGFBR1-207ENST00000549766 RETNLBQ9BQ08 111 aa13.63□□□□□ -0.23
TGFBR1-207ENST00000549766 MYCBP2O75592 4640 aa13.62□□□□□ -0.23
TGFBR1-207ENST00000549766 H3BPC8 53 aa13.62□□□□□ -0.23
TGFBR1-207ENST00000549766 OXTP01178 125 aa13.59□□□□□ -0.23
TGFBR1-207ENST00000549766 TMEM258P61165 79 aa13.57□□□□□ -0.24
TGFBR1-207ENST00000549766 LINC00208Q96KT6 92 aa13.57□□□□□ -0.24
TGFBR1-207ENST00000549766 KRTAP13-3Q3SY46 172 aa13.56□□□□□ -0.24
TGFBR1-207ENST00000549766 Q5W150 140 aa13.53□□□□□ -0.24
TGFBR1-207ENST00000549766 C1orf64Q8NEQ6 169 aa13.52□□□□□ -0.25
TGFBR1-207ENST00000549766 FP248Q71RG6 208 aaPredicted RBP13.5□□□□□ -0.25
TGFBR1-207ENST00000549766 C9orf92A6NGG3 77 aa13.46□□□□□ -0.26
TGFBR1-207ENST00000549766 DMBT1Q9UGM3 2413 aaPredicted RBP13.44□□□□□ -0.26
TGFBR1-207ENST00000549766 HERC1Q15751 4861 aa13.43□□□□□ -0.26
TGFBR1-207ENST00000549766 C20orf166-AS1Q96NR2 134 aa13.42□□□□□ -0.26
TGFBR1-207ENST00000549766 FAM236DA0A1B0GTK5 79 aa13.4□□□□□ -0.26
TGFBR1-207ENST00000549766 A8MUU9 505 aa13.4□□□□□ -0.26
TGFBR1-207ENST00000549766 FAM236CP0DP71 79 aa13.4□□□□□ -0.26
TGFBR1-207ENST00000549766 LOC101927531A0A1B0GV80 90 aa13.37□□□□□ -0.27
TGFBR1-207ENST00000549766 IGLV7-46A0A075B6I9 117 aa13.34□□□□□ -0.27
TGFBR1-207ENST00000549766 ATP5EP56381 51 aaPredicted RBP13.34□□□□□ -0.27
TGFBR1-207ENST00000549766 CYP4F30PQ9H0H9 118 aa13.3□□□□□ -0.28
TGFBR1-207ENST00000549766 IGKV2-30P06310 120 aa13.28□□□□□ -0.28
TGFBR1-207ENST00000549766 Q75L30 129 aa13.28□□□□□ -0.28
TGFBR1-207ENST00000549766 SPANXA2-OT1Q8N9U9 137 aa13.28□□□□□ -0.28
TGFBR1-207ENST00000549766 PCOTHQ58A44 107 aa13.25□□□□□ -0.29
TGFBR1-207ENST00000549766 RPS28P62857 69 aaKnown RBP13.2□□□□□ -0.3
TGFBR1-207ENST00000549766 PRR4Q16378 134 aa13.19□□□□□ -0.3
TGFBR1-207ENST00000549766 XP32Q5T750 250 aa13.17□□□□□ -0.3
TGFBR1-207ENST00000549766 SERP1Q9Y6X1 66 aa13.15□□□□□ -0.3
TGFBR1-207ENST00000549766 J3QL48 77 aa13.14□□□□□ -0.31
TGFBR1-207ENST00000549766 IGKV2D-30A0A075B6S6 120 aa13.12□□□□□ -0.31
TGFBR1-207ENST00000549766 TPRXLQ17RH7 258 aa13.12□□□□□ -0.31
TGFBR1-207ENST00000549766 RPL37P61927 97 aaKnown RBP13.12□□□□□ -0.31
TGFBR1-207ENST00000549766 C7orf65Q6ZTY9 151 aa13.09□□□□□ -0.31
TGFBR1-207ENST00000549766 HRES1P13985 223 aa13.08□□□□□ -0.32
TGFBR1-207ENST00000549766 ATP11AUNQ6ZP68 121 aa13.02□□□□□ -0.32
TGFBR1-207ENST00000549766 SPINK7P58062 85 aa12.96□□□□□ -0.34
TGFBR1-207ENST00000549766 DMAC1Q96GE9 116 aa12.92□□□□□ -0.34
TGFBR1-207ENST00000549766 LPAP08519 4548 aa12.87□□□□□ -0.35
TGFBR1-207ENST00000549766 COA5Q86WW8 74 aa12.85□□□□□ -0.35
TGFBR1-207ENST00000549766 LRP2P98164 4655 aa12.84□□□□□ -0.35
TGFBR1-207ENST00000549766 HMCN2Q8NDA2 5059 aa12.84□□□□□ -0.35
TGFBR1-207ENST00000549766 ACYP2P14621 99 aa12.82□□□□□ -0.36
TGFBR1-207ENST00000549766 SMIM26A0A096LP01 95 aa12.81□□□□□ -0.36
TGFBR1-207ENST00000549766 C4orf26Q17RF5 130 aa12.8□□□□□ -0.36
TGFBR1-207ENST00000549766 A8MUN3 132 aa12.73□□□□□ -0.37
TGFBR1-207ENST00000549766 UBR4Q5T4S7 5183 aa12.72□□□□□ -0.37
TGFBR1-207ENST00000549766 KRTAP3-1Q9BYR8 98 aa12.7□□□□□ -0.38
TGFBR1-207ENST00000549766 COX6B2Q6YFQ2 88 aa12.66□□□□□ -0.38
TGFBR1-207ENST00000549766 SEC61BP60468 96 aaKnown RBP12.62□□□□□ -0.39
TGFBR1-207ENST00000549766 CHKB-CPT1BH3BT56 60 aa12.57□□□□□ -0.4
TGFBR1-207ENST00000549766 Q1T7F1 81 aa12.57□□□□□ -0.4
TGFBR1-207ENST00000549766 MPLKIPQ8TAP9 179 aa12.56□□□□□ -0.4
TGFBR1-207ENST00000549766 MUC17Q685J3 4493 aa12.51□□□□□ -0.41
TGFBR1-207ENST00000549766 V9GYY9 64 aa12.48□□□□□ -0.41
TGFBR1-207ENST00000549766 KRTAP4-1Q9BYQ7 146 aa12.41□□□□□ -0.42
TGFBR1-207ENST00000549766 LINC01558Q9Y6Z2 57 aa12.4□□□□□ -0.42
TGFBR1-207ENST00000549766 RBM12B-AS1Q9P1G2 102 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms