RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
SMARCD1-206ENST00000549274 A0A1W2PNM2 257 aa5.61□□□□□ -1.51
SMARCD1-206ENST00000549274 ETDBQ3ZM63 59 aa5.6□□□□□ -1.51
SMARCD1-206ENST00000549274 A0A087WSZ3 146 aa5.59□□□□□ -1.51
SMARCD1-206ENST00000549274 A0A0G2JQZ4 141 aa5.57□□□□□ -1.52
SMARCD1-206ENST00000549274 J3KT08 172 aa5.57□□□□□ -1.52
SMARCD1-206ENST00000549274 J3QR89 54 aa5.57□□□□□ -1.52
SMARCD1-206ENST00000549274 ACYP1P07311 99 aa5.56□□□□□ -1.52
SMARCD1-206ENST00000549274 SEC61BP60468 96 aaKnown RBP5.55□□□□□ -1.52
SMARCD1-206ENST00000549274 NREPQ16612 68 aa5.55□□□□□ -1.52
SMARCD1-206ENST00000549274 UBL5Q9BZL1 73 aa5.55□□□□□ -1.52
SMARCD1-206ENST00000549274 FAM240AA0A1B0GVK7 77 aa5.54□□□□□ -1.52
SMARCD1-206ENST00000549274 PRR4Q16378 134 aa5.54□□□□□ -1.52
SMARCD1-206ENST00000549274 C1orf195Q5TG92 126 aa5.53□□□□□ -1.52
SMARCD1-206ENST00000549274 IGLV7-46A0A075B6I9 117 aa5.52□□□□□ -1.53
SMARCD1-206ENST00000549274 SEC61GP60059 68 aa5.52□□□□□ -1.53
SMARCD1-206ENST00000549274 NDUFB1O75438 58 aa5.51□□□□□ -1.53
SMARCD1-206ENST00000549274 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
SMARCD1-206ENST00000549274 IGKV4-1P06312 121 aa5.5□□□□□ -1.53
SMARCD1-206ENST00000549274 TPRXLQ17RH7 258 aa5.5□□□□□ -1.53
SMARCD1-206ENST00000549274 SIGMAR1Q99720 223 aa5.5□□□□□ -1.53
SMARCD1-206ENST00000549274 RETNLBQ9BQ08 111 aa5.5□□□□□ -1.53
SMARCD1-206ENST00000549274 LINC00472Q9H8W2 130 aa5.5□□□□□ -1.53
SMARCD1-206ENST00000549274 Q6ZVQ6 151 aa5.48□□□□□ -1.53
SMARCD1-206ENST00000549274 HERC1Q15751 4861 aa5.48□□□□□ -1.53
SMARCD1-206ENST00000549274 K7ERU9 68 aa5.47□□□□□ -1.53
SMARCD1-206ENST00000549274 BPY2O14599 106 aa5.47□□□□□ -1.53
SMARCD1-206ENST00000549274 Q96NJ1 140 aa5.47□□□□□ -1.53
SMARCD1-206ENST00000549274 LINC00846Q9NV44 126 aa5.47□□□□□ -1.53
SMARCD1-206ENST00000549274 C8orf87E5RJ46 101 aa5.46□□□□□ -1.54
SMARCD1-206ENST00000549274 A8MWP4 228 aa5.45□□□□□ -1.54
SMARCD1-206ENST00000549274 ATP5EP2Q5VTU8 51 aa5.45□□□□□ -1.54
SMARCD1-206ENST00000549274 CXCL6P80162 114 aa5.44□□□□□ -1.54
SMARCD1-206ENST00000549274 A0A1B0GVX0 72 aa5.43□□□□□ -1.54
SMARCD1-206ENST00000549274 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
SMARCD1-206ENST00000549274 LINC00313P59037 77 aa5.41□□□□□ -1.54
SMARCD1-206ENST00000549274 DEFB116Q30KQ4 102 aa5.41□□□□□ -1.54
SMARCD1-206ENST00000549274 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
SMARCD1-206ENST00000549274 IGHV6-1A0A0B4J1U7 121 aa5.4□□□□□ -1.54
SMARCD1-206ENST00000549274 PRR15Q8IV56 129 aa5.4□□□□□ -1.54
SMARCD1-206ENST00000549274 HMCN2Q8NDA2 5059 aa5.38□□□□□ -1.55
SMARCD1-206ENST00000549274 IGKV3D-7A0A0C4DH55 119 aa5.38□□□□□ -1.55
SMARCD1-206ENST00000549274 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
SMARCD1-206ENST00000549274 C9orf92A6NGG3 77 aa5.37□□□□□ -1.55
SMARCD1-206ENST00000549274 DSCR10P59022 87 aa5.37□□□□□ -1.55
SMARCD1-206ENST00000549274 C8orf17Q9NRJ1 99 aa5.36□□□□□ -1.55
SMARCD1-206ENST00000549274 K7EQZ3 153 aa5.35□□□□□ -1.55
SMARCD1-206ENST00000549274 TMEM254Q8TBM7 123 aa5.34□□□□□ -1.55
SMARCD1-206ENST00000549274 hDV103S1A0JD37 113 aa5.33□□□□□ -1.56
SMARCD1-206ENST00000549274 C20orf166-AS1Q96NR2 134 aa5.33□□□□□ -1.56
SMARCD1-206ENST00000549274 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
SMARCD1-206ENST00000549274 RPL37P61927 97 aaKnown RBP5.32□□□□□ -1.56
SMARCD1-206ENST00000549274 LRP2P98164 4655 aa5.32□□□□□ -1.56
SMARCD1-206ENST00000549274 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 A8MUU9 505 aa5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 ATP11AUNQ6ZP68 121 aa5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 MRPL34Q9BQ48 92 aaKnown RBP5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
SMARCD1-206ENST00000549274 LPAP08519 4548 aa5.3□□□□□ -1.56
SMARCD1-206ENST00000549274 HIST1H4AP62805 103 aaKnown RBP5.3□□□□□ -1.56
SMARCD1-206ENST00000549274 KRTAP5-3Q6L8H2 238 aa5.3□□□□□ -1.56
SMARCD1-206ENST00000549274 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
SMARCD1-206ENST00000549274 Q8N9L7 120 aa5.29□□□□□ -1.56
SMARCD1-206ENST00000549274 Q8N9P0 234 aaPredicted RBP5.29□□□□□ -1.56
SMARCD1-206ENST00000549274 NOTCH2NLQ7Z3S9 236 aa5.27□□□□□ -1.57
SMARCD1-206ENST00000549274 NDUFS5O43920 106 aa5.26□□□□□ -1.57
SMARCD1-206ENST00000549274 WFDC13Q8IUB5 93 aa5.26□□□□□ -1.57
SMARCD1-206ENST00000549274 MPLKIPQ8TAP9 179 aa5.26□□□□□ -1.57
SMARCD1-206ENST00000549274 TP53AIP1Q9HCN2 124 aa5.26□□□□□ -1.57
SMARCD1-206ENST00000549274 MUC17Q685J3 4493 aa5.23□□□□□ -1.57
SMARCD1-206ENST00000549274 ZCCHC13Q8WW36 166 aaKnown RBP5.23□□□□□ -1.57
SMARCD1-206ENST00000549274 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
SMARCD1-206ENST00000549274 PCOTHQ58A44 107 aa5.21□□□□□ -1.58
SMARCD1-206ENST00000549274 MT-ATP8P03928 68 aa5.19□□□□□ -1.58
SMARCD1-206ENST00000549274 SCGB1A1P11684 91 aa5.19□□□□□ -1.58
SMARCD1-206ENST00000549274 A0A087WVE0 104 aa5.18□□□□□ -1.58
SMARCD1-206ENST00000549274 UQCRQO14949 82 aa5.18□□□□□ -1.58
SMARCD1-206ENST00000549274 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
SMARCD1-206ENST00000549274 A0A0U1RQV1 116 aa5.17□□□□□ -1.58
SMARCD1-206ENST00000549274 KRTAP9-7A8MTY7 169 aa5.17□□□□□ -1.58
SMARCD1-206ENST00000549274 ATOX1O00244 68 aa5.16□□□□□ -1.58
SMARCD1-206ENST00000549274 TRAV22A0A0B4J277 110 aa5.14□□□□□ -1.59
SMARCD1-206ENST00000549274 FAM236AA0A1B0GUQ0 79 aa5.13□□□□□ -1.59
SMARCD1-206ENST00000549274 FAM236BA0A1B0GV22 79 aa5.13□□□□□ -1.59
SMARCD1-206ENST00000549274 C7orf65Q6ZTY9 151 aa5.13□□□□□ -1.59
SMARCD1-206ENST00000549274 KRTAP9-8Q9BYQ0 159 aa5.13□□□□□ -1.59
SMARCD1-206ENST00000549274 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
SMARCD1-206ENST00000549274 H3BPC8 53 aa5.11□□□□□ -1.59
SMARCD1-206ENST00000549274 MP68P56378 58 aa5.11□□□□□ -1.59
SMARCD1-206ENST00000549274 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
SMARCD1-206ENST00000549274 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SMARCD1-206ENST00000549274 OCR1Q9BZK8 76 aa5.1□□□□□ -1.59
SMARCD1-206ENST00000549274 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 TRAV7A0A075B6U4 112 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 H0Y9P7 68 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 SPINK7P58062 85 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 Q5W150 140 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 RBM12B-AS1Q9P1G2 102 aa5.09□□□□□ -1.59
SMARCD1-206ENST00000549274 IGKV2D-30A0A075B6S6 120 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms