RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 A0A087WSZ3 146 aa4.68□□□□□ -1.66
DEPDC4-207ENST00000549249 TNXBP22105 4242 aa4.67□□□□□ -1.66
DEPDC4-207ENST00000549249 A0A1B0GW54 56 aa4.67□□□□□ -1.66
DEPDC4-207ENST00000549249 KRTAP10-8P60410 259 aa4.67□□□□□ -1.66
DEPDC4-207ENST00000549249 CD164Q04900 197 aa4.67□□□□□ -1.66
DEPDC4-207ENST00000549249 MT1HL1P0DM35 61 aa4.66□□□□□ -1.66
DEPDC4-207ENST00000549249 Q6ZVQ6 151 aa4.66□□□□□ -1.66
DEPDC4-207ENST00000549249 FAT3Q8TDW7 4589 aa4.65□□□□□ -1.66
DEPDC4-207ENST00000549249 LINC00304Q8N9R0 145 aa4.65□□□□□ -1.67
DEPDC4-207ENST00000549249 LRP1Q07954 4544 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-207ENST00000549249 Q96NJ1 140 aa4.64□□□□□ -1.67
DEPDC4-207ENST00000549249 UBL5Q9BZL1 73 aa4.64□□□□□ -1.67
DEPDC4-207ENST00000549249 NREPQ16612 68 aa4.63□□□□□ -1.67
DEPDC4-207ENST00000549249 SPINK1P00995 79 aa4.62□□□□□ -1.67
DEPDC4-207ENST00000549249 Q5XG85 94 aa4.62□□□□□ -1.67
DEPDC4-207ENST00000549249 LINC00643Q86TS7 51 aa4.62□□□□□ -1.67
DEPDC4-207ENST00000549249 LINC00472Q9H8W2 130 aa4.62□□□□□ -1.67
DEPDC4-207ENST00000549249 MT-ATP8P03928 68 aa4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 ASB16-AS1Q495Z4 193 aa4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 SPAG11AQ6PDA7 123 aa4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 SS18L2Q9UHA2 77 aa4.61□□□□□ -1.67
DEPDC4-207ENST00000549249 IGKV3D-7A0A0C4DH55 119 aa4.6□□□□□ -1.67
DEPDC4-207ENST00000549249 HMCN2Q8NDA2 5059 aa4.59□□□□□ -1.67
DEPDC4-207ENST00000549249 DSCR10P59022 87 aa4.59□□□□□ -1.67
DEPDC4-207ENST00000549249 C1orf195Q5TG92 126 aa4.59□□□□□ -1.67
DEPDC4-207ENST00000549249 LIMD2Q9BT23 127 aa4.59□□□□□ -1.67
DEPDC4-207ENST00000549249 BPY2O14599 106 aa4.58□□□□□ -1.68
DEPDC4-207ENST00000549249 CXCL6P80162 114 aa4.58□□□□□ -1.68
DEPDC4-207ENST00000549249 ATP5EP2Q5VTU8 51 aa4.58□□□□□ -1.68
DEPDC4-207ENST00000549249 SIGMAR1Q99720 223 aa4.58□□□□□ -1.68
DEPDC4-207ENST00000549249 IGKV4-1P06312 121 aa4.57□□□□□ -1.68
DEPDC4-207ENST00000549249 Q8N9L7 120 aa4.57□□□□□ -1.68
DEPDC4-207ENST00000549249 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
DEPDC4-207ENST00000549249 K7EQZ3 153 aa4.56□□□□□ -1.68
DEPDC4-207ENST00000549249 J3KT08 172 aa4.55□□□□□ -1.68
DEPDC4-207ENST00000549249 UBR4Q5T4S7 5183 aa4.54□□□□□ -1.68
DEPDC4-207ENST00000549249 A8MWP4 228 aa4.54□□□□□ -1.68
DEPDC4-207ENST00000549249 RETNLBQ9BQ08 111 aa4.54□□□□□ -1.68
DEPDC4-207ENST00000549249 A0A087WVE0 104 aa4.53□□□□□ -1.68
DEPDC4-207ENST00000549249 A0A1B0GVX0 72 aa4.52□□□□□ -1.69
DEPDC4-207ENST00000549249 HIST1H4AP62805 103 aaKnown RBP4.52□□□□□ -1.69
DEPDC4-207ENST00000549249 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
DEPDC4-207ENST00000549249 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
DEPDC4-207ENST00000549249 NOTCH2NLQ7Z3S9 236 aa4.51□□□□□ -1.69
DEPDC4-207ENST00000549249 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
DEPDC4-207ENST00000549249 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
DEPDC4-207ENST00000549249 NDUFB1O75438 58 aa4.49□□□□□ -1.69
DEPDC4-207ENST00000549249 C8orf17Q9NRJ1 99 aa4.49□□□□□ -1.69
DEPDC4-207ENST00000549249 FAM236AA0A1B0GUQ0 79 aa4.47□□□□□ -1.69
DEPDC4-207ENST00000549249 FAM236BA0A1B0GV22 79 aa4.47□□□□□ -1.69
DEPDC4-207ENST00000549249 HCG22E2RYF7 251 aa4.47□□□□□ -1.69
DEPDC4-207ENST00000549249 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
DEPDC4-207ENST00000549249 WFDC13Q8IUB5 93 aa4.47□□□□□ -1.69
DEPDC4-207ENST00000549249 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
DEPDC4-207ENST00000549249 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
DEPDC4-207ENST00000549249 LINC00313P59037 77 aa4.45□□□□□ -1.7
DEPDC4-207ENST00000549249 IGLV7-46A0A075B6I9 117 aa4.44□□□□□ -1.7
DEPDC4-207ENST00000549249 hDV103S1A0JD37 113 aa4.44□□□□□ -1.7
DEPDC4-207ENST00000549249 CASC2Q6XLA1 102 aa4.44□□□□□ -1.7
DEPDC4-207ENST00000549249 C9orf92A6NGG3 77 aa4.43□□□□□ -1.7
DEPDC4-207ENST00000549249 PRR4Q16378 134 aa4.43□□□□□ -1.7
DEPDC4-207ENST00000549249 TMEM254Q8TBM7 123 aa4.43□□□□□ -1.7
DEPDC4-207ENST00000549249 LRP2P98164 4655 aa4.42□□□□□ -1.7
DEPDC4-207ENST00000549249 SCGB1A1P11684 91 aa4.42□□□□□ -1.7
DEPDC4-207ENST00000549249 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
DEPDC4-207ENST00000549249 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
DEPDC4-207ENST00000549249 Q8N9P0 234 aaPredicted RBP4.4□□□□□ -1.71
DEPDC4-207ENST00000549249 OCR1Q9BZK8 76 aa4.39□□□□□ -1.71
DEPDC4-207ENST00000549249 ATOX1O00244 68 aa4.38□□□□□ -1.71
DEPDC4-207ENST00000549249 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
DEPDC4-207ENST00000549249 C20orf166-AS1Q96NR2 134 aa4.38□□□□□ -1.71
DEPDC4-207ENST00000549249 RNF213Q63HN8 5207 aa4.38□□□□□ -1.71
DEPDC4-207ENST00000549249 A8MUU9 505 aa4.37□□□□□ -1.71
DEPDC4-207ENST00000549249 NDUFS5O43920 106 aa4.36□□□□□ -1.71
DEPDC4-207ENST00000549249 TRAV7A0A075B6U4 112 aa4.35□□□□□ -1.71
DEPDC4-207ENST00000549249 Q5W150 140 aa4.34□□□□□ -1.71
DEPDC4-207ENST00000549249 Q75L30 129 aa4.34□□□□□ -1.71
DEPDC4-207ENST00000549249 LPAP08519 4548 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 UQCRQO14949 82 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 RPL37P61927 97 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 SMIM20Q8N5G0 67 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 SERP2Q8N6R1 65 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 ANAPC13Q9BS18 74 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 TP53AIP1Q9HCN2 124 aa4.33□□□□□ -1.72
DEPDC4-207ENST00000549249 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
DEPDC4-207ENST00000549249 COX7CP15954 63 aa4.31□□□□□ -1.72
DEPDC4-207ENST00000549249 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
DEPDC4-207ENST00000549249 A0A0U1RQV1 116 aa4.3□□□□□ -1.72
DEPDC4-207ENST00000549249 H0Y9P7 68 aa4.3□□□□□ -1.72
DEPDC4-207ENST00000549249 CCDC179H3BU77 68 aa4.28□□□□□ -1.72
DEPDC4-207ENST00000549249 C5orf47Q569G3 176 aa4.28□□□□□ -1.72
DEPDC4-207ENST00000549249 PCP4P48539 62 aa4.26□□□□□ -1.73
DEPDC4-207ENST00000549249 PCOTHQ58A44 107 aa4.26□□□□□ -1.73
DEPDC4-207ENST00000549249 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
DEPDC4-207ENST00000549249 LINC00208Q96KT6 92 aa4.26□□□□□ -1.73
DEPDC4-207ENST00000549249 CYSTM1Q9H1C7 97 aa4.26□□□□□ -1.73
DEPDC4-207ENST00000549249 IGKV2-30P06310 120 aa4.25□□□□□ -1.73
DEPDC4-207ENST00000549249 MP68P56378 58 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 272.8 ms