RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 ATXN8Q156A1 80 aa8.71□□□□□ -1.02
CHMP1A-205ENST00000548650 DEFB116Q30KQ4 102 aa8.71□□□□□ -1.02
CHMP1A-205ENST00000548650 FAM236DA0A1B0GTK5 79 aa8.7□□□□□ -1.02
CHMP1A-205ENST00000548650 CCKP06307 115 aa8.7□□□□□ -1.02
CHMP1A-205ENST00000548650 FAM236CP0DP71 79 aa8.7□□□□□ -1.02
CHMP1A-205ENST00000548650 RBM3P98179 157 aaKnown RBP8.68□□□□□ -1.02
CHMP1A-205ENST00000548650 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
CHMP1A-205ENST00000548650 IGHV6-1A0A0B4J1U7 121 aa8.67□□□□□ -1.02
CHMP1A-205ENST00000548650 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
CHMP1A-205ENST00000548650 DSCR8Q96T75 97 aa8.66□□□□□ -1.02
CHMP1A-205ENST00000548650 RBM12B-AS1Q9P1G2 102 aa8.65□□□□□ -1.02
CHMP1A-205ENST00000548650 MT1FP04733 61 aa8.64□□□□□ -1.03
CHMP1A-205ENST00000548650 LYRM7Q5U5X0 104 aa8.64□□□□□ -1.03
CHMP1A-205ENST00000548650 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
CHMP1A-205ENST00000548650 C9JAW5 83 aa8.61□□□□□ -1.03
CHMP1A-205ENST00000548650 C8orf87E5RJ46 101 aa8.61□□□□□ -1.03
CHMP1A-205ENST00000548650 C9orf118A6NHY6 69 aa8.6□□□□□ -1.03
CHMP1A-205ENST00000548650 TAX1BP3O14907 124 aa8.6□□□□□ -1.03
CHMP1A-205ENST00000548650 KRTAP9-7A8MTY7 169 aa8.58□□□□□ -1.04
CHMP1A-205ENST00000548650 JMJD7-PLA2G4BH0Y9G9 81 aa8.58□□□□□ -1.04
CHMP1A-205ENST00000548650 LCE2BO14633 110 aa8.58□□□□□ -1.04
CHMP1A-205ENST00000548650 FCGBPQ9Y6R7 5405 aaPredicted RBP8.58□□□□□ -1.04
CHMP1A-205ENST00000548650 A0A1W2PPM0 123 aa8.56□□□□□ -1.04
CHMP1A-205ENST00000548650 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
CHMP1A-205ENST00000548650 Q6ZQT0 140 aa8.55□□□□□ -1.04
CHMP1A-205ENST00000548650 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
CHMP1A-205ENST00000548650 C14orf132Q9NPU4 83 aa8.54□□□□□ -1.04
CHMP1A-205ENST00000548650 LOC110117498A0A087WWA1 95 aa8.53□□□□□ -1.04
CHMP1A-205ENST00000548650 KRTAP10-10P60014 251 aa8.53□□□□□ -1.04
CHMP1A-205ENST00000548650 J3KT08 172 aa8.52□□□□□ -1.05
CHMP1A-205ENST00000548650 MTURNQ8N3F0 131 aa8.52□□□□□ -1.05
CHMP1A-205ENST00000548650 SPINK7P58062 85 aa8.5□□□□□ -1.05
CHMP1A-205ENST00000548650 C21orf62-AS1Q17RA5 79 aa8.5□□□□□ -1.05
CHMP1A-205ENST00000548650 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
CHMP1A-205ENST00000548650 PDE6GP18545 87 aa8.49□□□□□ -1.05
CHMP1A-205ENST00000548650 H3BT86 120 aa8.48□□□□□ -1.05
CHMP1A-205ENST00000548650 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
CHMP1A-205ENST00000548650 SPCS1Q9Y6A9 102 aa8.46□□□□□ -1.06
CHMP1A-205ENST00000548650 A0A1B0GW54 56 aa8.44□□□□□ -1.06
CHMP1A-205ENST00000548650 COL5A1-AS1Q5SY13 56 aa8.44□□□□□ -1.06
CHMP1A-205ENST00000548650 A8MWP4 228 aa8.43□□□□□ -1.06
CHMP1A-205ENST00000548650 NDUFB1O75438 58 aa8.43□□□□□ -1.06
CHMP1A-205ENST00000548650 C8orf17Q9NRJ1 99 aa8.43□□□□□ -1.06
CHMP1A-205ENST00000548650 WFDC13Q8IUB5 93 aa8.42□□□□□ -1.06
CHMP1A-205ENST00000548650 IGKV3D-7A0A0C4DH55 119 aa8.4□□□□□ -1.06
CHMP1A-205ENST00000548650 PCP4L1A6NKN8 68 aa8.4□□□□□ -1.06
CHMP1A-205ENST00000548650 NREPQ16612 68 aa8.38□□□□□ -1.07
CHMP1A-205ENST00000548650 SMCPP49901 116 aaPredicted RBP8.37□□□□□ -1.07
CHMP1A-205ENST00000548650 Q6ZVQ6 151 aa8.35□□□□□ -1.07
CHMP1A-205ENST00000548650 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
CHMP1A-205ENST00000548650 K7EP34 96 aa8.33□□□□□ -1.08
CHMP1A-205ENST00000548650 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
CHMP1A-205ENST00000548650 MACF1Q9UPN3 7388 aaKnown RBP8.32□□□□□ -1.08
CHMP1A-205ENST00000548650 MMP24-AS1A0A0U1RRL7 71 aa8.31□□□□□ -1.08
CHMP1A-205ENST00000548650 KRTAP19-6Q3LI70 58 aa8.31□□□□□ -1.08
CHMP1A-205ENST00000548650 PRO0461Q9UI25 63 aa8.31□□□□□ -1.08
CHMP1A-205ENST00000548650 TMEM254Q8TBM7 123 aa8.28□□□□□ -1.08
CHMP1A-205ENST00000548650 MRPL34Q9BQ48 92 aaKnown RBP8.27□□□□□ -1.09
CHMP1A-205ENST00000548650 K7EQZ3 153 aa8.25□□□□□ -1.09
CHMP1A-205ENST00000548650 GTF2H5Q6ZYL4 71 aa8.25□□□□□ -1.09
CHMP1A-205ENST00000548650 BPY2O14599 106 aa8.24□□□□□ -1.09
CHMP1A-205ENST00000548650 LINC00846Q9NV44 126 aa8.23□□□□□ -1.09
CHMP1A-205ENST00000548650 hDV103S1A0JD37 113 aa8.21□□□□□ -1.1
CHMP1A-205ENST00000548650 H1FX-AS1Q4G0G2 97 aa8.21□□□□□ -1.1
CHMP1A-205ENST00000548650 Q8N9L7 120 aa8.18□□□□□ -1.1
CHMP1A-205ENST00000548650 F8W1H4 67 aa8.17□□□□□ -1.1
CHMP1A-205ENST00000548650 NDUFS5O43920 106 aa8.17□□□□□ -1.1
CHMP1A-205ENST00000548650 ETDBQ3ZM63 59 aa8.15□□□□□ -1.1
CHMP1A-205ENST00000548650 UBL5Q9BZL1 73 aa8.15□□□□□ -1.1
CHMP1A-205ENST00000548650 IGKV2D-30A0A075B6S6 120 aa8.14□□□□□ -1.11
CHMP1A-205ENST00000548650 IGKV2-30P06310 120 aa8.14□□□□□ -1.11
CHMP1A-205ENST00000548650 Q5W150 140 aa8.13□□□□□ -1.11
CHMP1A-205ENST00000548650 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
CHMP1A-205ENST00000548650 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
CHMP1A-205ENST00000548650 HCG22E2RYF7 251 aa8.05□□□□□ -1.12
CHMP1A-205ENST00000548650 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
CHMP1A-205ENST00000548650 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
CHMP1A-205ENST00000548650 CXCL6P80162 114 aa7.98□□□□□ -1.13
CHMP1A-205ENST00000548650 A0A1B0GV90 55 aa7.93□□□□□ -1.14
CHMP1A-205ENST00000548650 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
CHMP1A-205ENST00000548650 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
CHMP1A-205ENST00000548650 ACYP1P07311 99 aa7.92□□□□□ -1.14
CHMP1A-205ENST00000548650 FAM236AA0A1B0GUQ0 79 aa7.89□□□□□ -1.15
CHMP1A-205ENST00000548650 FAM236BA0A1B0GV22 79 aa7.89□□□□□ -1.15
CHMP1A-205ENST00000548650 NEBP20929 6669 aa7.88□□□□□ -1.15
CHMP1A-205ENST00000548650 MT1BP07438 61 aa7.88□□□□□ -1.15
CHMP1A-205ENST00000548650 S4R3F8 94 aa7.88□□□□□ -1.15
CHMP1A-205ENST00000548650 FAM240AA0A1B0GVK7 77 aa7.87□□□□□ -1.15
CHMP1A-205ENST00000548650 LCA10Q71F78 164 aa7.84□□□□□ -1.15
CHMP1A-205ENST00000548650 TP53AIP1Q9HCN2 124 aa7.84□□□□□ -1.15
CHMP1A-205ENST00000548650 KRTAP19-8Q3LI54 63 aa7.83□□□□□ -1.16
CHMP1A-205ENST00000548650 C1orf64Q8NEQ6 169 aa7.83□□□□□ -1.16
CHMP1A-205ENST00000548650 SPRR2GQ9BYE4 73 aa7.83□□□□□ -1.16
CHMP1A-205ENST00000548650 A6NN06 94 aa7.82□□□□□ -1.16
CHMP1A-205ENST00000548650 CSAG1Q6PB30 78 aa7.82□□□□□ -1.16
CHMP1A-205ENST00000548650 HIST1H4AP62805 103 aaKnown RBP7.81□□□□□ -1.16
CHMP1A-205ENST00000548650 ATP5EP2Q5VTU8 51 aa7.81□□□□□ -1.16
CHMP1A-205ENST00000548650 Q5VV11 94 aa7.81□□□□□ -1.16
CHMP1A-205ENST00000548650 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
CHMP1A-205ENST00000548650 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms