RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 ANKRD29Q8N6D5 301 aa2.83□□□□□ -1.96
APP-217ENST00000548570 H3BT86 120 aa2.82□□□□□ -1.96
APP-217ENST00000548570 LYRM7Q5U5X0 104 aa2.82□□□□□ -1.96
APP-217ENST00000548570 Q6JHZ5 121 aa2.82□□□□□ -1.96
APP-217ENST00000548570 Q6Q795 121 aa2.82□□□□□ -1.96
APP-217ENST00000548570 NOTCH2NLQ7Z3S9 236 aa2.82□□□□□ -1.96
APP-217ENST00000548570 SMIM20Q8N5G0 67 aa2.82□□□□□ -1.96
APP-217ENST00000548570 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
APP-217ENST00000548570 TRBV7-7A0A0K0K1E9 115 aa2.81□□□□□ -1.96
APP-217ENST00000548570 SNCGO76070 127 aa2.81□□□□□ -1.96
APP-217ENST00000548570 SPINK1P00995 79 aa2.81□□□□□ -1.96
APP-217ENST00000548570 RPS29P62273 56 aaKnown RBP2.81□□□□□ -1.96
APP-217ENST00000548570 Q5XG85 94 aa2.81□□□□□ -1.96
APP-217ENST00000548570 SPAG11AQ6PDA7 123 aa2.81□□□□□ -1.96
APP-217ENST00000548570 Q6ZQT0 140 aa2.81□□□□□ -1.96
APP-217ENST00000548570 DMBT1Q9UGM3 2413 aaPredicted RBP2.8□□□□□ -1.96
APP-217ENST00000548570 RNF213Q63HN8 5207 aa2.8□□□□□ -1.96
APP-217ENST00000548570 LOC110117498A0A087WWA1 95 aa2.8□□□□□ -1.96
APP-217ENST00000548570 F8WEM9 126 aa2.8□□□□□ -1.96
APP-217ENST00000548570 H3BQ85 93 aa2.8□□□□□ -1.96
APP-217ENST00000548570 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
APP-217ENST00000548570 Q96NJ1 140 aa2.8□□□□□ -1.96
APP-217ENST00000548570 C14orf132Q9NPU4 83 aa2.8□□□□□ -1.96
APP-217ENST00000548570 KRTAP10-7P60409 375 aaPredicted RBP2.79□□□□□ -1.96
APP-217ENST00000548570 RBM3P98179 157 aaKnown RBP2.79□□□□□ -1.96
APP-217ENST00000548570 GTF2H5Q6ZYL4 71 aa2.79□□□□□ -1.96
APP-217ENST00000548570 TEN1Q86WV5 123 aa2.79□□□□□ -1.96
APP-217ENST00000548570 VPS25Q9BRG1 176 aa2.79□□□□□ -1.96
APP-217ENST00000548570 A0A087WSZ3 146 aa2.78□□□□□ -1.96
APP-217ENST00000548570 F8W1H4 67 aa2.78□□□□□ -1.96
APP-217ENST00000548570 JMJD7-PLA2G4BH0Y9G9 81 aa2.78□□□□□ -1.96
APP-217ENST00000548570 NDUFS5O43920 106 aa2.78□□□□□ -1.96
APP-217ENST00000548570 CCKP06307 115 aa2.78□□□□□ -1.96
APP-217ENST00000548570 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
APP-217ENST00000548570 ETDBQ3ZM63 59 aa2.78□□□□□ -1.96
APP-217ENST00000548570 ASB16-AS1Q495Z4 193 aa2.78□□□□□ -1.96
APP-217ENST00000548570 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
APP-217ENST00000548570 LINC00472Q9H8W2 130 aa2.77□□□□□ -1.97
APP-217ENST00000548570 PSPHP1O15172 72 aa2.76□□□□□ -1.97
APP-217ENST00000548570 PRR4Q16378 134 aa2.76□□□□□ -1.97
APP-217ENST00000548570 KRTAP13-3Q3SY46 172 aa2.76□□□□□ -1.97
APP-217ENST00000548570 DSCR8Q96T75 97 aa2.76□□□□□ -1.97
APP-217ENST00000548570 LIMD2Q9BT23 127 aa2.76□□□□□ -1.97
APP-217ENST00000548570 OCR1Q9BZK8 76 aa2.76□□□□□ -1.97
APP-217ENST00000548570 IGLV7-46A0A075B6I9 117 aa2.75□□□□□ -1.97
APP-217ENST00000548570 DEFB116Q30KQ4 102 aa2.75□□□□□ -1.97
APP-217ENST00000548570 FP248Q71RG6 208 aaPredicted RBP2.75□□□□□ -1.97
APP-217ENST00000548570 MUC2Q02817 5179 aa2.74□□□□□ -1.97
APP-217ENST00000548570 PDE6GP18545 87 aa2.74□□□□□ -1.97
APP-217ENST00000548570 RPS28P62857 69 aaKnown RBP2.74□□□□□ -1.97
APP-217ENST00000548570 TPRXLQ17RH7 258 aa2.74□□□□□ -1.97
APP-217ENST00000548570 SS18L2Q9UHA2 77 aa2.74□□□□□ -1.97
APP-217ENST00000548570 K7ERU9 68 aa2.73□□□□□ -1.97
APP-217ENST00000548570 ANAPC13Q9BS18 74 aa2.73□□□□□ -1.97
APP-217ENST00000548570 LINC00846Q9NV44 126 aa2.73□□□□□ -1.97
APP-217ENST00000548570 A0A1B0GW54 56 aa2.72□□□□□ -1.97
APP-217ENST00000548570 DSCR10P59022 87 aa2.72□□□□□ -1.97
APP-217ENST00000548570 C9orf92A6NGG3 77 aa2.71□□□□□ -1.98
APP-217ENST00000548570 KRTAP16-1A8MUX0 517 aa2.71□□□□□ -1.98
APP-217ENST00000548570 J3KT08 172 aa2.71□□□□□ -1.98
APP-217ENST00000548570 SMIM26A0A096LP01 95 aa2.7□□□□□ -1.98
APP-217ENST00000548570 IGKV3D-7A0A0C4DH55 119 aa2.7□□□□□ -1.98
APP-217ENST00000548570 C8orf87E5RJ46 101 aa2.7□□□□□ -1.98
APP-217ENST00000548570 IGKV4-1P06312 121 aa2.7□□□□□ -1.98
APP-217ENST00000548570 KRTAP10-6P60371 365 aaPredicted RBP2.7□□□□□ -1.98
APP-217ENST00000548570 LCE1AQ5T7P2 110 aa2.7□□□□□ -1.98
APP-217ENST00000548570 KRTAP5-11Q6L8G4 156 aa2.7□□□□□ -1.98
APP-217ENST00000548570 Q8N9P0 234 aaPredicted RBP2.7□□□□□ -1.98
APP-217ENST00000548570 PRAC1Q96KF2 57 aa2.7□□□□□ -1.98
APP-217ENST00000548570 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
APP-217ENST00000548570 IGHV6-1A0A0B4J1U7 121 aa2.69□□□□□ -1.98
APP-217ENST00000548570 FAM236DA0A1B0GTK5 79 aa2.69□□□□□ -1.98
APP-217ENST00000548570 FAM236CP0DP71 79 aa2.69□□□□□ -1.98
APP-217ENST00000548570 MP68P56378 58 aa2.69□□□□□ -1.98
APP-217ENST00000548570 NREPQ16612 68 aa2.69□□□□□ -1.98
APP-217ENST00000548570 A8MWP4 228 aa2.68□□□□□ -1.98
APP-217ENST00000548570 K7EQZ3 153 aa2.68□□□□□ -1.98
APP-217ENST00000548570 Q8N9L7 120 aa2.68□□□□□ -1.98
APP-217ENST00000548570 MMP24-AS1A0A0U1RRL7 71 aa2.67□□□□□ -1.98
APP-217ENST00000548570 A0A1B0GVX0 72 aa2.67□□□□□ -1.98
APP-217ENST00000548570 J3QR89 54 aa2.67□□□□□ -1.98
APP-217ENST00000548570 PRR15Q8IV56 129 aa2.67□□□□□ -1.98
APP-217ENST00000548570 IMUPQ9GZP8 106 aa2.67□□□□□ -1.98
APP-217ENST00000548570 A8MUU9 505 aa2.66□□□□□ -1.98
APP-217ENST00000548570 BPY2O14599 106 aa2.66□□□□□ -1.98
APP-217ENST00000548570 RPL37P61927 97 aaKnown RBP2.66□□□□□ -1.98
APP-217ENST00000548570 C20orf166-AS1Q96NR2 134 aa2.66□□□□□ -1.98
APP-217ENST00000548570 C8orf17Q9NRJ1 99 aa2.66□□□□□ -1.98
APP-217ENST00000548570 FAT4Q6V0I7 4981 aa2.65□□□□□ -1.98
APP-217ENST00000548570 ACYP1P07311 99 aa2.65□□□□□ -1.99
APP-217ENST00000548570 LINC00313P59037 77 aa2.65□□□□□ -1.99
APP-217ENST00000548570 UBL5Q9BZL1 73 aa2.65□□□□□ -1.99
APP-217ENST00000548570 RBM12B-AS1Q9P1G2 102 aa2.65□□□□□ -1.99
APP-217ENST00000548570 PCOTHQ58A44 107 aa2.64□□□□□ -1.99
APP-217ENST00000548570 CAMK2N1Q7Z7J9 78 aa2.64□□□□□ -1.99
APP-217ENST00000548570 CXCL6P80162 114 aa2.63□□□□□ -1.99
APP-217ENST00000548570 KRTAP19-2Q3LHN2 52 aa2.63□□□□□ -1.99
APP-217ENST00000548570 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
APP-217ENST00000548570 A0A087WVE0 104 aa2.61□□□□□ -1.99
APP-217ENST00000548570 NDUFB1O75438 58 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms