RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SPRR1BP22528 89 aa8.99□□□□□ -0.97
SSH1-208ENST00000548522 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
SSH1-208ENST00000548522 ST20-AS1Q8NBB2 130 aa8.98□□□□□ -0.97
SSH1-208ENST00000548522 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
SSH1-208ENST00000548522 CXCL6P80162 114 aa8.96□□□□□ -0.98
SSH1-208ENST00000548522 C9orf92A6NGG3 77 aa8.95□□□□□ -0.98
SSH1-208ENST00000548522 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
SSH1-208ENST00000548522 HIST1H4AP62805 103 aaKnown RBP8.95□□□□□ -0.98
SSH1-208ENST00000548522 Q6ZVQ6 151 aa8.94□□□□□ -0.98
SSH1-208ENST00000548522 SMIM29Q86T20 159 aa8.94□□□□□ -0.98
SSH1-208ENST00000548522 DEFB105AQ8NG35 78 aa8.94□□□□□ -0.98
SSH1-208ENST00000548522 F8WEM9 126 aa8.93□□□□□ -0.98
SSH1-208ENST00000548522 ANAPC13Q9BS18 74 aa8.93□□□□□ -0.98
SSH1-208ENST00000548522 FLGP20930 4061 aaPredicted RBP8.93□□□□□ -0.98
SSH1-208ENST00000548522 KRTAP10-6P60371 365 aaPredicted RBP8.92□□□□□ -0.98
SSH1-208ENST00000548522 HRCT1Q6UXD1 115 aa8.92□□□□□ -0.98
SSH1-208ENST00000548522 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
SSH1-208ENST00000548522 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
SSH1-208ENST00000548522 IGKV3D-7A0A0C4DH55 119 aa8.89□□□□□ -0.99
SSH1-208ENST00000548522 ATOX1O00244 68 aa8.89□□□□□ -0.99
SSH1-208ENST00000548522 A0A1W2PNM2 257 aa8.86□□□□□ -0.99
SSH1-208ENST00000548522 LIMD2Q9BT23 127 aa8.85□□□□□ -0.99
SSH1-208ENST00000548522 NREPQ16612 68 aa8.84□□□□□ -0.99
SSH1-208ENST00000548522 IGFL1Q6UW32 110 aa8.81□□□□□ -1
SSH1-208ENST00000548522 M0R2T5 61 aa8.8□□□□□ -1
SSH1-208ENST00000548522 UQCRQO14949 82 aa8.78□□□□□ -1
SSH1-208ENST00000548522 SMIM20Q8N5G0 67 aa8.78□□□□□ -1
SSH1-208ENST00000548522 BPY2O14599 106 aa8.77□□□□□ -1.01
SSH1-208ENST00000548522 A0A087WVE0 104 aa8.76□□□□□ -1.01
SSH1-208ENST00000548522 A0A0G2JQZ4 141 aa8.75□□□□□ -1.01
SSH1-208ENST00000548522 COX7CP15954 63 aa8.75□□□□□ -1.01
SSH1-208ENST00000548522 RPL37P61927 97 aaKnown RBP8.74□□□□□ -1.01
SSH1-208ENST00000548522 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
SSH1-208ENST00000548522 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
SSH1-208ENST00000548522 C1orf195Q5TG92 126 aa8.73□□□□□ -1.01
SSH1-208ENST00000548522 CD164Q04900 197 aa8.72□□□□□ -1.01
SSH1-208ENST00000548522 IGKV4-1P06312 121 aa8.71□□□□□ -1.02
SSH1-208ENST00000548522 USH2AO75445 5202 aa8.69□□□□□ -1.02
SSH1-208ENST00000548522 CCDC179H3BU77 68 aa8.68□□□□□ -1.02
SSH1-208ENST00000548522 Q5XG85 94 aa8.68□□□□□ -1.02
SSH1-208ENST00000548522 SSPOA2VEC9 5147 aa8.68□□□□□ -1.02
SSH1-208ENST00000548522 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
SSH1-208ENST00000548522 A0A087WSZ3 146 aa8.67□□□□□ -1.02
SSH1-208ENST00000548522 J3KT08 172 aa8.65□□□□□ -1.02
SSH1-208ENST00000548522 DSCR10P59022 87 aa8.65□□□□□ -1.02
SSH1-208ENST00000548522 SS18L2Q9UHA2 77 aa8.65□□□□□ -1.02
SSH1-208ENST00000548522 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
SSH1-208ENST00000548522 LINC00472Q9H8W2 130 aa8.62□□□□□ -1.03
SSH1-208ENST00000548522 KRTAP9-7A8MTY7 169 aa8.6□□□□□ -1.03
SSH1-208ENST00000548522 Q8N9L7 120 aa8.58□□□□□ -1.04
SSH1-208ENST00000548522 A8MWP4 228 aa8.57□□□□□ -1.04
SSH1-208ENST00000548522 K7EQZ3 153 aa8.57□□□□□ -1.04
SSH1-208ENST00000548522 HCG22E2RYF7 251 aa8.55□□□□□ -1.04
SSH1-208ENST00000548522 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
SSH1-208ENST00000548522 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
SSH1-208ENST00000548522 KLKP1Q107X0 134 aa8.54□□□□□ -1.04
SSH1-208ENST00000548522 NDUFB1O75438 58 aa8.51□□□□□ -1.05
SSH1-208ENST00000548522 Q96NJ1 140 aa8.51□□□□□ -1.05
SSH1-208ENST00000548522 KRTAP9-8Q9BYQ0 159 aa8.51□□□□□ -1.05
SSH1-208ENST00000548522 FCGBPQ9Y6R7 5405 aaPredicted RBP8.51□□□□□ -1.05
SSH1-208ENST00000548522 NDUFC1O43677 76 aa8.5□□□□□ -1.05
SSH1-208ENST00000548522 TMEM258P61165 79 aa8.5□□□□□ -1.05
SSH1-208ENST00000548522 Q75L30 129 aa8.47□□□□□ -1.05
SSH1-208ENST00000548522 ATP11AUNQ6ZP68 121 aa8.46□□□□□ -1.06
SSH1-208ENST00000548522 C20orf197Q8N268 126 aa8.46□□□□□ -1.06
SSH1-208ENST00000548522 DEFB116Q30KQ4 102 aa8.44□□□□□ -1.06
SSH1-208ENST00000548522 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
SSH1-208ENST00000548522 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
SSH1-208ENST00000548522 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
SSH1-208ENST00000548522 CASC2Q6XLA1 102 aa8.42□□□□□ -1.06
SSH1-208ENST00000548522 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
SSH1-208ENST00000548522 H3BPC8 53 aa8.4□□□□□ -1.06
SSH1-208ENST00000548522 H7BZZ5 65 aa8.39□□□□□ -1.07
SSH1-208ENST00000548522 CYSTM1Q9H1C7 97 aa8.39□□□□□ -1.07
SSH1-208ENST00000548522 ATP5EP56381 51 aaPredicted RBP8.38□□□□□ -1.07
SSH1-208ENST00000548522 hDV103S1A0JD37 113 aa8.37□□□□□ -1.07
SSH1-208ENST00000548522 C8orf87E5RJ46 101 aa8.37□□□□□ -1.07
SSH1-208ENST00000548522 WFDC13Q8IUB5 93 aa8.37□□□□□ -1.07
SSH1-208ENST00000548522 TP53AIP1Q9HCN2 124 aa8.37□□□□□ -1.07
SSH1-208ENST00000548522 C8orf17Q9NRJ1 99 aa8.37□□□□□ -1.07
SSH1-208ENST00000548522 MT2AP02795 61 aa8.36□□□□□ -1.07
SSH1-208ENST00000548522 RPS28P62857 69 aaKnown RBP8.36□□□□□ -1.07
SSH1-208ENST00000548522 ZCCHC13Q8WW36 166 aaKnown RBP8.35□□□□□ -1.07
SSH1-208ENST00000548522 KRTAP19-1Q8IUB9 90 aa8.33□□□□□ -1.08
SSH1-208ENST00000548522 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
SSH1-208ENST00000548522 LCE2BO14633 110 aa8.32□□□□□ -1.08
SSH1-208ENST00000548522 MP68P56378 58 aa8.32□□□□□ -1.08
SSH1-208ENST00000548522 SNURFQ9Y675 71 aa8.32□□□□□ -1.08
SSH1-208ENST00000548522 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
SSH1-208ENST00000548522 FAM236DA0A1B0GTK5 79 aa8.31□□□□□ -1.08
SSH1-208ENST00000548522 MT1FP04733 61 aa8.31□□□□□ -1.08
SSH1-208ENST00000548522 FAM236CP0DP71 79 aa8.31□□□□□ -1.08
SSH1-208ENST00000548522 MACF1Q9UPN3 7388 aaKnown RBP8.31□□□□□ -1.08
SSH1-208ENST00000548522 A8MUU9 505 aa8.3□□□□□ -1.08
SSH1-208ENST00000548522 MRPL34Q9BQ48 92 aaKnown RBP8.29□□□□□ -1.08
SSH1-208ENST00000548522 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
SSH1-208ENST00000548522 TRAV22A0A0B4J277 110 aa8.26□□□□□ -1.09
SSH1-208ENST00000548522 KRTAP16-1A8MUX0 517 aa8.25□□□□□ -1.09
SSH1-208ENST00000548522 H0Y9P7 68 aa8.24□□□□□ -1.09
SSH1-208ENST00000548522 KRTAP9-3Q9BYQ3 159 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms