RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 C8orf87E5RJ46 101 aa7.86□□□□□ -1.15
RAPGEF3-217ENST00000548434 UQCR10Q9UDW1 63 aa7.86□□□□□ -1.15
RAPGEF3-217ENST00000548434 RBM3P98179 157 aaKnown RBP7.85□□□□□ -1.15
RAPGEF3-217ENST00000548434 RBM12B-AS1Q9P1G2 102 aa7.85□□□□□ -1.15
RAPGEF3-217ENST00000548434 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
RAPGEF3-217ENST00000548434 FAM236DA0A1B0GTK5 79 aa7.83□□□□□ -1.16
RAPGEF3-217ENST00000548434 FAM236CP0DP71 79 aa7.83□□□□□ -1.16
RAPGEF3-217ENST00000548434 Q6ZQT0 140 aa7.83□□□□□ -1.16
RAPGEF3-217ENST00000548434 KRTAP19-1Q8IUB9 90 aa7.83□□□□□ -1.16
RAPGEF3-217ENST00000548434 ZCCHC13Q8WW36 166 aaKnown RBP7.83□□□□□ -1.16
RAPGEF3-217ENST00000548434 BAALC-AS2P0C853 105 aa7.81□□□□□ -1.16
RAPGEF3-217ENST00000548434 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
RAPGEF3-217ENST00000548434 SPINK7P58062 85 aa7.79□□□□□ -1.16
RAPGEF3-217ENST00000548434 DSCR8Q96T75 97 aa7.79□□□□□ -1.16
RAPGEF3-217ENST00000548434 VPS25Q9BRG1 176 aa7.79□□□□□ -1.16
RAPGEF3-217ENST00000548434 J3KT08 172 aa7.78□□□□□ -1.16
RAPGEF3-217ENST00000548434 C9JAW5 83 aa7.77□□□□□ -1.17
RAPGEF3-217ENST00000548434 SCGB1C2P0DMR2 95 aa7.77□□□□□ -1.17
RAPGEF3-217ENST00000548434 C21orf62-AS1Q17RA5 79 aa7.75□□□□□ -1.17
RAPGEF3-217ENST00000548434 LOC110117498A0A087WWA1 95 aa7.74□□□□□ -1.17
RAPGEF3-217ENST00000548434 IGKV3D-7A0A0C4DH55 119 aa7.74□□□□□ -1.17
RAPGEF3-217ENST00000548434 C8orf17Q9NRJ1 99 aa7.73□□□□□ -1.17
RAPGEF3-217ENST00000548434 A8MWP4 228 aa7.72□□□□□ -1.17
RAPGEF3-217ENST00000548434 A0A1B0GW54 56 aa7.71□□□□□ -1.18
RAPGEF3-217ENST00000548434 NAA38Q9BRA0 125 aaKnown RBP7.69□□□□□ -1.18
RAPGEF3-217ENST00000548434 JMJD7-PLA2G4BH0Y9G9 81 aa7.68□□□□□ -1.18
RAPGEF3-217ENST00000548434 KRTAP19-6Q3LI70 58 aa7.68□□□□□ -1.18
RAPGEF3-217ENST00000548434 MTURNQ8N3F0 131 aa7.68□□□□□ -1.18
RAPGEF3-217ENST00000548434 TMA7Q9Y2S6 64 aaKnown RBP7.68□□□□□ -1.18
RAPGEF3-217ENST00000548434 NDUFB1O75438 58 aa7.66□□□□□ -1.18
RAPGEF3-217ENST00000548434 ATXN8Q156A1 80 aa7.65□□□□□ -1.18
RAPGEF3-217ENST00000548434 Q6ZVQ6 151 aa7.65□□□□□ -1.18
RAPGEF3-217ENST00000548434 PRR15Q8IV56 129 aa7.65□□□□□ -1.18
RAPGEF3-217ENST00000548434 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
RAPGEF3-217ENST00000548434 PDE6GP18545 87 aa7.63□□□□□ -1.19
RAPGEF3-217ENST00000548434 MMP24-AS1A0A0U1RRL7 71 aa7.62□□□□□ -1.19
RAPGEF3-217ENST00000548434 C14orf132Q9NPU4 83 aa7.62□□□□□ -1.19
RAPGEF3-217ENST00000548434 M0R143 59 aa7.6□□□□□ -1.19
RAPGEF3-217ENST00000548434 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
RAPGEF3-217ENST00000548434 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
RAPGEF3-217ENST00000548434 MRPL34Q9BQ48 92 aaKnown RBP7.57□□□□□ -1.2
RAPGEF3-217ENST00000548434 NREPQ16612 68 aa7.55□□□□□ -1.2
RAPGEF3-217ENST00000548434 K7EQZ3 153 aa7.53□□□□□ -1.2
RAPGEF3-217ENST00000548434 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
RAPGEF3-217ENST00000548434 Q5W150 140 aa7.53□□□□□ -1.2
RAPGEF3-217ENST00000548434 LYRM7Q5U5X0 104 aa7.52□□□□□ -1.21
RAPGEF3-217ENST00000548434 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
RAPGEF3-217ENST00000548434 SYNE2Q8WXH0 6885 aaKnown RBP7.5□□□□□ -1.21
RAPGEF3-217ENST00000548434 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
RAPGEF3-217ENST00000548434 H3BT86 120 aa7.46□□□□□ -1.22
RAPGEF3-217ENST00000548434 C9orf118A6NHY6 69 aa7.44□□□□□ -1.22
RAPGEF3-217ENST00000548434 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
RAPGEF3-217ENST00000548434 LINC00846Q9NV44 126 aa7.44□□□□□ -1.22
RAPGEF3-217ENST00000548434 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
RAPGEF3-217ENST00000548434 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
RAPGEF3-217ENST00000548434 BPY2O14599 106 aa7.39□□□□□ -1.23
RAPGEF3-217ENST00000548434 IGKV2-30P06310 120 aa7.39□□□□□ -1.23
RAPGEF3-217ENST00000548434 C7orf65Q6ZTY9 151 aa7.39□□□□□ -1.23
RAPGEF3-217ENST00000548434 NDUFS5O43920 106 aa7.38□□□□□ -1.23
RAPGEF3-217ENST00000548434 BATFQ16520 125 aa7.38□□□□□ -1.23
RAPGEF3-217ENST00000548434 KRTAP6-3Q3LI67 103 aa7.38□□□□□ -1.23
RAPGEF3-217ENST00000548434 Q8N9L7 120 aa7.38□□□□□ -1.23
RAPGEF3-217ENST00000548434 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
RAPGEF3-217ENST00000548434 SMCPP49901 116 aaPredicted RBP7.37□□□□□ -1.23
RAPGEF3-217ENST00000548434 TSTD3H0UI37 97 aa7.35□□□□□ -1.23
RAPGEF3-217ENST00000548434 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
RAPGEF3-217ENST00000548434 CASC2Q6XLA1 102 aa7.34□□□□□ -1.23
RAPGEF3-217ENST00000548434 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
RAPGEF3-217ENST00000548434 LOC105371267A0A1B0GV96 52 aa7.31□□□□□ -1.24
RAPGEF3-217ENST00000548434 MT1BP07438 61 aa7.3□□□□□ -1.24
RAPGEF3-217ENST00000548434 CXCL6P80162 114 aa7.29□□□□□ -1.24
RAPGEF3-217ENST00000548434 PRO0461Q9UI25 63 aa7.28□□□□□ -1.24
RAPGEF3-217ENST00000548434 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
RAPGEF3-217ENST00000548434 C5orf47Q569G3 176 aa7.24□□□□□ -1.25
RAPGEF3-217ENST00000548434 SPRR2GQ9BYE4 73 aa7.24□□□□□ -1.25
RAPGEF3-217ENST00000548434 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
RAPGEF3-217ENST00000548434 LCA10Q71F78 164 aa7.19□□□□□ -1.26
RAPGEF3-217ENST00000548434 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
RAPGEF3-217ENST00000548434 C1orf64Q8NEQ6 169 aa7.17□□□□□ -1.26
RAPGEF3-217ENST00000548434 S4R3F8 94 aa7.17□□□□□ -1.26
RAPGEF3-217ENST00000548434 MUC12Q9UKN1 5478 aa7.17□□□□□ -1.26
RAPGEF3-217ENST00000548434 UBL5Q9BZL1 73 aa7.15□□□□□ -1.26
RAPGEF3-217ENST00000548434 CSAG1Q6PB30 78 aa7.14□□□□□ -1.27
RAPGEF3-217ENST00000548434 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
RAPGEF3-217ENST00000548434 A6NN06 94 aa7.12□□□□□ -1.27
RAPGEF3-217ENST00000548434 Q5VV11 94 aa7.12□□□□□ -1.27
RAPGEF3-217ENST00000548434 K7EP34 96 aa7.11□□□□□ -1.27
RAPGEF3-217ENST00000548434 FAM236AA0A1B0GUQ0 79 aa7.1□□□□□ -1.27
RAPGEF3-217ENST00000548434 FAM236BA0A1B0GV22 79 aa7.1□□□□□ -1.27
RAPGEF3-217ENST00000548434 NEBP20929 6669 aa7.09□□□□□ -1.27
RAPGEF3-217ENST00000548434 COL5A1-AS1Q5SY13 56 aa7.09□□□□□ -1.27
RAPGEF3-217ENST00000548434 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
RAPGEF3-217ENST00000548434 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
RAPGEF3-217ENST00000548434 A0A087WVE0 104 aa7.07□□□□□ -1.28
RAPGEF3-217ENST00000548434 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
RAPGEF3-217ENST00000548434 KRTAP5-9P26371 169 aa7.02□□□□□ -1.29
RAPGEF3-217ENST00000548434 KMT2DO14686 5537 aa6.99□□□□□ -1.29
RAPGEF3-217ENST00000548434 F8W1H4 67 aa6.97□□□□□ -1.29
RAPGEF3-217ENST00000548434 ETDBQ3ZM63 59 aa6.97□□□□□ -1.29
RAPGEF3-217ENST00000548434 MDN1Q9NU22 5596 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms