RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 IGLV7-46A0A075B6I9 117 aa16.02■□□□□ 0.15
BRF1-213ENST00000548421 K7EQZ3 153 aa16.02■□□□□ 0.15
BRF1-213ENST00000548421 A0A1B0GVX0 72 aa16.01■□□□□ 0.15
BRF1-213ENST00000548421 PRR15Q8IV56 129 aa16■□□□□ 0.15
BRF1-213ENST00000548421 Q8N9L7 120 aa16■□□□□ 0.15
BRF1-213ENST00000548421 IGHV6-1A0A0B4J1U7 121 aa15.98■□□□□ 0.15
BRF1-213ENST00000548421 C8orf87E5RJ46 101 aa15.9■□□□□ 0.14
BRF1-213ENST00000548421 MT-ATP8P03928 68 aa15.9■□□□□ 0.14
BRF1-213ENST00000548421 HIST1H4AP62805 103 aaKnown RBP15.88■□□□□ 0.13
BRF1-213ENST00000548421 LINC00313P59037 77 aa15.87■□□□□ 0.13
BRF1-213ENST00000548421 C8orf17Q9NRJ1 99 aa15.86■□□□□ 0.13
BRF1-213ENST00000548421 C9orf92A6NGG3 77 aa15.85■□□□□ 0.13
BRF1-213ENST00000548421 KRTAP13-3Q3SY46 172 aa15.85■□□□□ 0.13
BRF1-213ENST00000548421 NOTCH2NLQ7Z3S9 236 aa15.85■□□□□ 0.13
BRF1-213ENST00000548421 TPRXLQ17RH7 258 aa15.84■□□□□ 0.13
BRF1-213ENST00000548421 MMP24-AS1A0A0U1RRL7 71 aa15.81■□□□□ 0.12
BRF1-213ENST00000548421 IMUPQ9GZP8 106 aa15.79■□□□□ 0.12
BRF1-213ENST00000548421 HCG22E2RYF7 251 aa15.78■□□□□ 0.12
BRF1-213ENST00000548421 A0A087WVE0 104 aa15.76■□□□□ 0.11
BRF1-213ENST00000548421 hDV103S1A0JD37 113 aa15.73■□□□□ 0.11
BRF1-213ENST00000548421 WFDC13Q8IUB5 93 aa15.73■□□□□ 0.11
BRF1-213ENST00000548421 LPAP08519 4548 aa15.73■□□□□ 0.11
BRF1-213ENST00000548421 HMCN2Q8NDA2 5059 aa15.73■□□□□ 0.11
BRF1-213ENST00000548421 KRTAP16-1A8MUX0 517 aa15.72■□□□□ 0.11
BRF1-213ENST00000548421 CASC2Q6XLA1 102 aa15.72■□□□□ 0.11
BRF1-213ENST00000548421 TMEM254Q8TBM7 123 aa15.7■□□□□ 0.1
BRF1-213ENST00000548421 MRPL34Q9BQ48 92 aaKnown RBP15.66■□□□□ 0.1
BRF1-213ENST00000548421 XP32Q5T750 250 aa15.65■□□□□ 0.1
BRF1-213ENST00000548421 C20orf166-AS1Q96NR2 134 aa15.59■□□□□ 0.09
BRF1-213ENST00000548421 Q8N9P0 234 aaPredicted RBP15.58■□□□□ 0.08
BRF1-213ENST00000548421 A8MUU9 505 aa15.57■□□□□ 0.08
BRF1-213ENST00000548421 LRP2P98164 4655 aa15.56■□□□□ 0.08
BRF1-213ENST00000548421 Q75L30 129 aa15.54■□□□□ 0.08
BRF1-213ENST00000548421 NDUFS5O43920 106 aa15.52■□□□□ 0.07
BRF1-213ENST00000548421 FAM236AA0A1B0GUQ0 79 aa15.51■□□□□ 0.07
BRF1-213ENST00000548421 FAM236BA0A1B0GV22 79 aa15.51■□□□□ 0.07
BRF1-213ENST00000548421 RPL37P61927 97 aaKnown RBP15.5■□□□□ 0.07
BRF1-213ENST00000548421 SCGB1A1P11684 91 aa15.45■□□□□ 0.06
BRF1-213ENST00000548421 TP53AIP1Q9HCN2 124 aa15.4■□□□□ 0.06
BRF1-213ENST00000548421 ATP11AUNQ6ZP68 121 aa15.36■□□□□ 0.05
BRF1-213ENST00000548421 ZCCHC13Q8WW36 166 aaKnown RBP15.33■□□□□ 0.05
BRF1-213ENST00000548421 OCR1Q9BZK8 76 aa15.33■□□□□ 0.05
BRF1-213ENST00000548421 UBR4Q5T4S7 5183 aa15.32■□□□□ 0.04
BRF1-213ENST00000548421 ATOX1O00244 68 aa15.31■□□□□ 0.04
BRF1-213ENST00000548421 SEC61BP60468 96 aaKnown RBP15.31■□□□□ 0.04
BRF1-213ENST00000548421 UQCRQO14949 82 aa15.28■□□□□ 0.04
BRF1-213ENST00000548421 MUC17Q685J3 4493 aa15.27■□□□□ 0.04
BRF1-213ENST00000548421 PCOTHQ58A44 107 aa15.27■□□□□ 0.04
BRF1-213ENST00000548421 SMIM20Q8N5G0 67 aa15.27■□□□□ 0.03
BRF1-213ENST00000548421 Q5W150 140 aa15.25■□□□□ 0.03
BRF1-213ENST00000548421 TRAV22A0A0B4J277 110 aa15.2■□□□□ 0.02
BRF1-213ENST00000548421 TRAV7A0A075B6U4 112 aa15.18■□□□□ 0.02
BRF1-213ENST00000548421 H0Y9P7 68 aa15.12■□□□□ 0.01
BRF1-213ENST00000548421 C5orf47Q569G3 176 aa15.11■□□□□ 0.01
BRF1-213ENST00000548421 SERP2Q8N6R1 65 aa15.09■□□□□ 0.01
BRF1-213ENST00000548421 MP68P56378 58 aa15.07■□□□□ 0
BRF1-213ENST00000548421 ANAPC13Q9BS18 74 aa15.01□□□□□ -0.01
BRF1-213ENST00000548421 IGKV2D-30A0A075B6S6 120 aa15□□□□□ -0.01
BRF1-213ENST00000548421 IGKV2-30P06310 120 aa15□□□□□ -0.01
BRF1-213ENST00000548421 SPINK7P58062 85 aa14.99□□□□□ -0.01
BRF1-213ENST00000548421 C7orf65Q6ZTY9 151 aa14.98□□□□□ -0.01
BRF1-213ENST00000548421 LINC00208Q96KT6 92 aa14.98□□□□□ -0.01
BRF1-213ENST00000548421 LOC101927531A0A1B0GV80 90 aa14.97□□□□□ -0.01
BRF1-213ENST00000548421 H3BPC8 53 aa14.97□□□□□ -0.01
BRF1-213ENST00000548421 C1orf64Q8NEQ6 169 aa14.96□□□□□ -0.01
BRF1-213ENST00000548421 KRTAP4-1Q9BYQ7 146 aa14.95□□□□□ -0.02
BRF1-213ENST00000548421 COX7CP15954 63 aa14.94□□□□□ -0.02
BRF1-213ENST00000548421 CYP4F30PQ9H0H9 118 aa14.89□□□□□ -0.03
BRF1-213ENST00000548421 RNF213Q63HN8 5207 aa14.87□□□□□ -0.03
BRF1-213ENST00000548421 A0A0U1RQV1 116 aa14.85□□□□□ -0.03
BRF1-213ENST00000548421 C20orf197Q8N268 126 aa14.84□□□□□ -0.03
BRF1-213ENST00000548421 MUC2Q02817 5179 aa14.83□□□□□ -0.04
BRF1-213ENST00000548421 SNURFQ9Y675 71 aa14.79□□□□□ -0.04
BRF1-213ENST00000548421 HRES1P13985 223 aa14.77□□□□□ -0.04
BRF1-213ENST00000548421 KLKP1Q107X0 134 aa14.74□□□□□ -0.05
BRF1-213ENST00000548421 CCDC179H3BU77 68 aa14.67□□□□□ -0.06
BRF1-213ENST00000548421 MPLKIPQ8TAP9 179 aa14.66□□□□□ -0.06
BRF1-213ENST00000548421 RBM12B-AS1Q9P1G2 102 aa14.63□□□□□ -0.07
BRF1-213ENST00000548421 C4orf26Q17RF5 130 aa14.63□□□□□ -0.07
BRF1-213ENST00000548421 NDUFC1O43677 76 aa14.55□□□□□ -0.08
BRF1-213ENST00000548421 CYSTM1Q9H1C7 97 aa14.54□□□□□ -0.08
BRF1-213ENST00000548421 COX6B2Q6YFQ2 88 aa14.53□□□□□ -0.08
BRF1-213ENST00000548421 FAM236DA0A1B0GTK5 79 aa14.5□□□□□ -0.09
BRF1-213ENST00000548421 FAM236CP0DP71 79 aa14.5□□□□□ -0.09
BRF1-213ENST00000548421 PCP4P48539 62 aa14.49□□□□□ -0.09
BRF1-213ENST00000548421 KRTAP19-2Q3LHN2 52 aa14.47□□□□□ -0.09
BRF1-213ENST00000548421 H7BZZ5 65 aa14.46□□□□□ -0.09
BRF1-213ENST00000548421 SPANXA2-OT1Q8N9U9 137 aa14.41□□□□□ -0.1
BRF1-213ENST00000548421 KRTAP3-1Q9BYR8 98 aa14.41□□□□□ -0.1
BRF1-213ENST00000548421 A8MUN3 132 aa14.36□□□□□ -0.11
BRF1-213ENST00000548421 H1FX-AS1Q4G0G2 97 aa14.33□□□□□ -0.12
BRF1-213ENST00000548421 LCE2CQ5TA81 110 aa14.33□□□□□ -0.12
BRF1-213ENST00000548421 DMAC1Q96GE9 116 aa14.33□□□□□ -0.12
BRF1-213ENST00000548421 FAT4Q6V0I7 4981 aa14.32□□□□□ -0.12
BRF1-213ENST00000548421 FLGP20930 4061 aaPredicted RBP14.28□□□□□ -0.12
BRF1-213ENST00000548421 ACYP2P14621 99 aa14.18□□□□□ -0.14
BRF1-213ENST00000548421 TMEM258P61165 79 aa14.18□□□□□ -0.14
BRF1-213ENST00000548421 ATP5EP56381 51 aaPredicted RBP14.13□□□□□ -0.15
BRF1-213ENST00000548421 S4R3F8 94 aa14.12□□□□□ -0.15
BRF1-213ENST00000548421 MT1HP80294 61 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms