RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 ETDCA0A1B0GVM5 59 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 BAALC-AS2P0C853 105 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 FABP2P12104 132 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 COX17Q14061 63 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 C7orf65Q6ZTY9 151 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 SSBP3-AS1Q7Z2R9 100 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 Q8N8P6 123 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 SPRR4Q96PI1 79 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 AMELXQ99217 191 aa1.56□□□□□ -2.16
PTCH1-216ENST00000548379 NXT2Q9NPJ8 142 aaKnown RBP1.56□□□□□ -2.16
PTCH1-216ENST00000548379 TRBV7-6A0A0J9YX20 115 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 IGIPA6NJ69 53 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 SPINK8P0C7L1 97 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 PEA15Q15121 130 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 C9orf153Q5TBE3 101 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 ALKAL2Q6UX46 152 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 LIMD2Q9BT23 127 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 ERG28Q9UKR5 140 aa1.55□□□□□ -2.16
PTCH1-216ENST00000548379 LINC00587B1AMM8 73 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 C9JAW5 83 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 LINC00158P58513 81 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 MT1HP80294 61 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 TCTE3Q8IZS6 198 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 CST9LQ9H4G1 147 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 C14orf132Q9NPU4 83 aa1.54□□□□□ -2.16
PTCH1-216ENST00000548379 H3BMG7 143 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 DPM2O94777 84 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 MT-ND4LP03901 98 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 ROMO1P60602 79 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 Q1T7F1 81 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 MEIG1Q5JSS6 88 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 Q5XG85 94 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 CHCHD1Q96BP2 118 aaKnown RBP1.53□□□□□ -2.16
PTCH1-216ENST00000548379 ZNF625Q96I27 306 aaPredicted RBP1.53□□□□□ -2.16
PTCH1-216ENST00000548379 SMCO4Q9NRQ5 59 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 HSPB8Q9UJY1 196 aa1.53□□□□□ -2.16
PTCH1-216ENST00000548379 C9orf92A6NGG3 77 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 NCR3O14931 201 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 S100A7L2Q5SY68 101 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 TMEM170BQ5T4T1 132 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 KCNQ1DNQ9H478 68 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 MUC17Q685J3 4493 aa1.52□□□□□ -2.17
PTCH1-216ENST00000548379 TRAV12-1A0A0B4J245 112 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 IGLC3P0DOY3 106 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 ADCYAP1P18509 176 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 S100PP25815 95 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 SPRR1AP35321 89 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 BRK1Q8WUW1 75 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 LINC00846Q9NV44 126 aa1.51□□□□□ -2.17
PTCH1-216ENST00000548379 TRBV10-3A0A0K0K1G6 114 aa1.5□□□□□ -2.17
PTCH1-216ENST00000548379 SMIM13P0DJ93 91 aa1.5□□□□□ -2.17
PTCH1-216ENST00000548379 ATP11AUNQ6ZP68 121 aa1.5□□□□□ -2.17
PTCH1-216ENST00000548379 Q6ZRX8 168 aa1.5□□□□□ -2.17
PTCH1-216ENST00000548379 BAGE3Q86Y29 109 aa1.5□□□□□ -2.17
PTCH1-216ENST00000548379 TRBV20-1A0A075B6N2 111 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 TRAV23DV6A0A075B6W5 121 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 MYMXA0A1B0GTQ4 84 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 HBDP02042 147 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 RPL37P61927 97 aaKnown RBP1.49□□□□□ -2.17
PTCH1-216ENST00000548379 KRTAP19-2Q3LHN2 52 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 TMEM254Q8TBM7 123 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 SEC11CQ9BY50 192 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 PRO1933Q9H354 126 aa1.49□□□□□ -2.17
PTCH1-216ENST00000548379 SYNE2Q8WXH0 6885 aaKnown RBP1.48□□□□□ -2.17
PTCH1-216ENST00000548379 hDV103S1A0JD37 113 aa1.48□□□□□ -2.17
PTCH1-216ENST00000548379 C20orf202A1L168 122 aa1.48□□□□□ -2.17
PTCH1-216ENST00000548379 LINC01546A6NGU7 62 aa1.48□□□□□ -2.17
PTCH1-216ENST00000548379 ERC2-IT1O76042 136 aa1.48□□□□□ -2.17
PTCH1-216ENST00000548379 AKR1D1P51857 326 aa1.48□□□□□ -2.17
PTCH1-216ENST00000548379 A0A087WSZ3 146 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 UQCRQO14949 82 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 FABP4P15090 132 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 COA5Q86WW8 74 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 DEFB105AQ8NG35 78 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 RAB37Q96AX2 223 aa1.47□□□□□ -2.17
PTCH1-216ENST00000548379 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
PTCH1-216ENST00000548379 LOC107984156A0A0G2JMH3 177 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 TEX49A0A1B0GTD5 131 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 F8WEM9 126 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 SPRR1BP22528 89 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 COX7BP24311 80 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 PMCHL1Q16048 86 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 ARL17AQ8IVW1 177 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 IFI27L1Q96BM0 104 aa1.46□□□□□ -2.18
PTCH1-216ENST00000548379 PLNP26678 52 aa1.45□□□□□ -2.18
PTCH1-216ENST00000548379 NPC2P61916 151 aa1.45□□□□□ -2.18
PTCH1-216ENST00000548379 CLEC2BQ92478 149 aa1.45□□□□□ -2.18
PTCH1-216ENST00000548379 SPANXDQ9BXN6 97 aa1.45□□□□□ -2.18
PTCH1-216ENST00000548379 TRACP01848 142 aa1.44□□□□□ -2.18
PTCH1-216ENST00000548379 ELOF1P60002 83 aaKnown RBP1.44□□□□□ -2.18
PTCH1-216ENST00000548379 C18orf32Q8TCD1 76 aa1.44□□□□□ -2.18
PTCH1-216ENST00000548379 COPS9Q8WXC6 57 aa1.44□□□□□ -2.18
PTCH1-216ENST00000548379 OBSCN-AS1Q96MR7 158 aa1.44□□□□□ -2.18
PTCH1-216ENST00000548379 VPS25Q9BRG1 176 aa1.44□□□□□ -2.18
PTCH1-216ENST00000548379 TMEM218A2RU14 115 aa1.43□□□□□ -2.18
PTCH1-216ENST00000548379 ZNF815PA8K554 130 aa1.43□□□□□ -2.18
PTCH1-216ENST00000548379 LEPROTL1O95214 131 aa1.43□□□□□ -2.18
PTCH1-216ENST00000548379 IGKCP01834 107 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms