RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 A0A1B0GVY2 172 aa10.85□□□□□ -0.67
VDR-204ENST00000547065 Q5XG85 94 aa10.85□□□□□ -0.67
VDR-204ENST00000547065 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
VDR-204ENST00000547065 VPS13BQ7Z7G8 4022 aa10.83□□□□□ -0.68
VDR-204ENST00000547065 MRPL34Q9BQ48 92 aaKnown RBP10.82□□□□□ -0.68
VDR-204ENST00000547065 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
VDR-204ENST00000547065 TRAV22A0A0B4J277 110 aa10.8□□□□□ -0.68
VDR-204ENST00000547065 NOTCH2NLQ7Z3S9 236 aa10.8□□□□□ -0.68
VDR-204ENST00000547065 C1orf64Q8NEQ6 169 aa10.78□□□□□ -0.68
VDR-204ENST00000547065 C8orf87E5RJ46 101 aa10.77□□□□□ -0.68
VDR-204ENST00000547065 NDUFS5O43920 106 aa10.76□□□□□ -0.69
VDR-204ENST00000547065 C1orf195Q5TG92 126 aa10.76□□□□□ -0.69
VDR-204ENST00000547065 LIMD2Q9BT23 127 aa10.76□□□□□ -0.69
VDR-204ENST00000547065 DYNC1H1Q14204 4646 aaKnown RBP10.76□□□□□ -0.69
VDR-204ENST00000547065 TYMSOSQ8TAI1 123 aa10.75□□□□□ -0.69
VDR-204ENST00000547065 C4orf48Q5BLP8 95 aa10.75□□□□□ -0.69
VDR-204ENST00000547065 PKHD1P08F94 4074 aa10.75□□□□□ -0.69
VDR-204ENST00000547065 SMR3BP02814 79 aaPredicted RBP10.71□□□□□ -0.69
VDR-204ENST00000547065 SMIM26A0A096LP01 95 aa10.7□□□□□ -0.7
VDR-204ENST00000547065 CYP4F30PQ9H0H9 118 aa10.7□□□□□ -0.7
VDR-204ENST00000547065 SPINK1P00995 79 aa10.7□□□□□ -0.7
VDR-204ENST00000547065 RYR2Q92736 4967 aa10.69□□□□□ -0.7
VDR-204ENST00000547065 LINC00313P59037 77 aa10.69□□□□□ -0.7
VDR-204ENST00000547065 SPANXA2-OT1Q8N9U9 137 aa10.69□□□□□ -0.7
VDR-204ENST00000547065 PRR26Q8N8Z3 221 aa10.64□□□□□ -0.71
VDR-204ENST00000547065 PRR4Q16378 134 aa10.62□□□□□ -0.71
VDR-204ENST00000547065 SPAG11AQ6PDA7 123 aa10.62□□□□□ -0.71
VDR-204ENST00000547065 KRTAP10-4P60372 401 aaPredicted RBP10.62□□□□□ -0.71
VDR-204ENST00000547065 RPS29P62273 56 aaKnown RBP10.61□□□□□ -0.71
VDR-204ENST00000547065 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
VDR-204ENST00000547065 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
VDR-204ENST00000547065 Q8N9P0 234 aaPredicted RBP10.59□□□□□ -0.71
VDR-204ENST00000547065 FP248Q71RG6 208 aaPredicted RBP10.58□□□□□ -0.72
VDR-204ENST00000547065 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
VDR-204ENST00000547065 KRTAP13-3Q3SY46 172 aa10.57□□□□□ -0.72
VDR-204ENST00000547065 Q5W150 140 aa10.57□□□□□ -0.72
VDR-204ENST00000547065 LOC101927531A0A1B0GV80 90 aa10.57□□□□□ -0.72
VDR-204ENST00000547065 C4orf26Q17RF5 130 aa10.56□□□□□ -0.72
VDR-204ENST00000547065 PCOTHQ58A44 107 aa10.56□□□□□ -0.72
VDR-204ENST00000547065 KRTAP16-1A8MUX0 517 aa10.54□□□□□ -0.72
VDR-204ENST00000547065 FAM229AH3BQW9 127 aa10.52□□□□□ -0.72
VDR-204ENST00000547065 SVIPQ8NHG7 77 aa10.52□□□□□ -0.73
VDR-204ENST00000547065 KMT2CQ8NEZ4 4911 aaKnown RBP10.52□□□□□ -0.73
VDR-204ENST00000547065 FAT1Q14517 4588 aa10.49□□□□□ -0.73
VDR-204ENST00000547065 MPLKIPQ8TAP9 179 aa10.44□□□□□ -0.74
VDR-204ENST00000547065 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
VDR-204ENST00000547065 RETNLBQ9BQ08 111 aa10.4□□□□□ -0.74
VDR-204ENST00000547065 Q1T7F1 81 aa10.39□□□□□ -0.75
VDR-204ENST00000547065 IGKV2-30P06310 120 aa10.38□□□□□ -0.75
VDR-204ENST00000547065 COA5Q86WW8 74 aa10.38□□□□□ -0.75
VDR-204ENST00000547065 V9GYY9 64 aa10.33□□□□□ -0.76
VDR-204ENST00000547065 HRES1P13985 223 aa10.31□□□□□ -0.76
VDR-204ENST00000547065 Q5VSD8 79 aa10.3□□□□□ -0.76
VDR-204ENST00000547065 KRTAP10-8P60410 259 aa10.26□□□□□ -0.77
VDR-204ENST00000547065 RYR3Q15413 4870 aa10.25□□□□□ -0.77
VDR-204ENST00000547065 ACYP2P14621 99 aa10.25□□□□□ -0.77
VDR-204ENST00000547065 IGKV2D-30A0A075B6S6 120 aa10.24□□□□□ -0.77
VDR-204ENST00000547065 HSPG2P98160 4391 aa10.23□□□□□ -0.77
VDR-204ENST00000547065 DMAC1Q96GE9 116 aa10.23□□□□□ -0.77
VDR-204ENST00000547065 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
VDR-204ENST00000547065 C9orf92A6NGG3 77 aa10.22□□□□□ -0.77
VDR-204ENST00000547065 A8MUU9 505 aa10.22□□□□□ -0.77
VDR-204ENST00000547065 Q8N1X5 172 aa10.22□□□□□ -0.77
VDR-204ENST00000547065 RYR1P21817 5038 aa10.19□□□□□ -0.78
VDR-204ENST00000547065 PSPHP1O15172 72 aa10.18□□□□□ -0.78
VDR-204ENST00000547065 C7orf65Q6ZTY9 151 aa10.16□□□□□ -0.78
VDR-204ENST00000547065 A8MUN3 132 aa10.14□□□□□ -0.79
VDR-204ENST00000547065 TNXBP22105 4242 aa10.14□□□□□ -0.79
VDR-204ENST00000547065 FLG2Q5D862 2391 aaPredicted RBP10.13□□□□□ -0.79
VDR-204ENST00000547065 LINC01558Q9Y6Z2 57 aa10.11□□□□□ -0.79
VDR-204ENST00000547065 KRTAP17-1Q9BYP8 105 aa10.1□□□□□ -0.79
VDR-204ENST00000547065 CHKB-CPT1BH3BT56 60 aa10.09□□□□□ -0.79
VDR-204ENST00000547065 PRR15LQ9BU68 103 aa10.09□□□□□ -0.79
VDR-204ENST00000547065 Q5VV11 94 aa10.09□□□□□ -0.79
VDR-204ENST00000547065 LRP1Q07954 4544 aaKnown RBP10.07□□□□□ -0.8
VDR-204ENST00000547065 Q75L30 129 aa10.07□□□□□ -0.8
VDR-204ENST00000547065 BRK1Q8WUW1 75 aa10.07□□□□□ -0.8
VDR-204ENST00000547065 PRO0628Q9UI54 55 aa10.07□□□□□ -0.8
VDR-204ENST00000547065 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
VDR-204ENST00000547065 MT1HL1P0DM35 61 aa9.97□□□□□ -0.81
VDR-204ENST00000547065 KIAA1109Q2LD37 5005 aa9.97□□□□□ -0.81
VDR-204ENST00000547065 SPINK7P58062 85 aa9.96□□□□□ -0.81
VDR-204ENST00000547065 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
VDR-204ENST00000547065 DMBT1Q9UGM3 2413 aaPredicted RBP9.89□□□□□ -0.83
VDR-204ENST00000547065 RPL37P61927 97 aaKnown RBP9.88□□□□□ -0.83
VDR-204ENST00000547065 EPPK1P58107 5090 aaKnown RBP9.87□□□□□ -0.83
VDR-204ENST00000547065 A6NED7 52 aa9.86□□□□□ -0.83
VDR-204ENST00000547065 XP32Q5T750 250 aa9.85□□□□□ -0.83
VDR-204ENST00000547065 KRTAP3-1Q9BYR8 98 aa9.82□□□□□ -0.84
VDR-204ENST00000547065 A0A1B0GU69 56 aa9.81□□□□□ -0.84
VDR-204ENST00000547065 SPTSSBQ8NFR3 76 aa9.8□□□□□ -0.84
VDR-204ENST00000547065 MYCBP2O75592 4640 aa9.79□□□□□ -0.84
VDR-204ENST00000547065 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
VDR-204ENST00000547065 LCA10Q71F78 164 aa9.77□□□□□ -0.85
VDR-204ENST00000547065 CDC42SE1Q9NRR8 79 aa9.75□□□□□ -0.85
VDR-204ENST00000547065 A8MU10 97 aa9.73□□□□□ -0.85
VDR-204ENST00000547065 KRTAP4-5Q9BYR2 181 aa9.71□□□□□ -0.85
VDR-204ENST00000547065 TPRXLQ17RH7 258 aa9.68□□□□□ -0.86
VDR-204ENST00000547065 SEC61GP60059 68 aa9.65□□□□□ -0.86
VDR-204ENST00000547065 UQCR11O14957 56 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms