RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 MPLKIPQ8TAP9 179 aa11.4□□□□□ -0.58
CHD4-214ENST00000545942 BAALC-AS2P0C853 105 aa11.39□□□□□ -0.59
CHD4-214ENST00000545942 C21orf62-AS1Q17RA5 79 aa11.38□□□□□ -0.59
CHD4-214ENST00000545942 C9JAW5 83 aa11.37□□□□□ -0.59
CHD4-214ENST00000545942 J3KT08 172 aa11.36□□□□□ -0.59
CHD4-214ENST00000545942 Q6ZQT0 140 aa11.33□□□□□ -0.6
CHD4-214ENST00000545942 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
CHD4-214ENST00000545942 NDUFB1O75438 58 aa11.28□□□□□ -0.6
CHD4-214ENST00000545942 MT2AP02795 61 aa11.28□□□□□ -0.6
CHD4-214ENST00000545942 ATXN8Q156A1 80 aa11.28□□□□□ -0.6
CHD4-214ENST00000545942 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
CHD4-214ENST00000545942 M0R143 59 aa11.26□□□□□ -0.61
CHD4-214ENST00000545942 MTURNQ8N3F0 131 aa11.25□□□□□ -0.61
CHD4-214ENST00000545942 USH2AO75445 5202 aa11.23□□□□□ -0.61
CHD4-214ENST00000545942 LOC110117498A0A087WWA1 95 aa11.23□□□□□ -0.61
CHD4-214ENST00000545942 A0A1B0GW54 56 aa11.23□□□□□ -0.61
CHD4-214ENST00000545942 Q8N9P0 234 aaPredicted RBP11.23□□□□□ -0.61
CHD4-214ENST00000545942 NAA38Q9BRA0 125 aaKnown RBP11.23□□□□□ -0.61
CHD4-214ENST00000545942 SPINK7P58062 85 aa11.22□□□□□ -0.61
CHD4-214ENST00000545942 A8MWP4 228 aa11.2□□□□□ -0.62
CHD4-214ENST00000545942 PDE6GP18545 87 aa11.2□□□□□ -0.62
CHD4-214ENST00000545942 MT1FP04733 61 aa11.19□□□□□ -0.62
CHD4-214ENST00000545942 C8orf17Q9NRJ1 99 aa11.19□□□□□ -0.62
CHD4-214ENST00000545942 SSPOA2VEC9 5147 aa11.16□□□□□ -0.62
CHD4-214ENST00000545942 KRTAP10-10P60014 251 aa11.15□□□□□ -0.62
CHD4-214ENST00000545942 IGKV3D-7A0A0C4DH55 119 aa11.14□□□□□ -0.63
CHD4-214ENST00000545942 C14orf132Q9NPU4 83 aa11.14□□□□□ -0.63
CHD4-214ENST00000545942 LYRM7Q5U5X0 104 aa11.13□□□□□ -0.63
CHD4-214ENST00000545942 KRTAP9-3Q9BYQ3 159 aa11.1□□□□□ -0.63
CHD4-214ENST00000545942 Q6ZVQ6 151 aa11.09□□□□□ -0.63
CHD4-214ENST00000545942 LCE2BO14633 110 aa11.09□□□□□ -0.63
CHD4-214ENST00000545942 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
CHD4-214ENST00000545942 NREPQ16612 68 aa11.08□□□□□ -0.64
CHD4-214ENST00000545942 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
CHD4-214ENST00000545942 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.07□□□□□ -0.64
CHD4-214ENST00000545942 SMIM6P0DI80 62 aa11.07□□□□□ -0.64
CHD4-214ENST00000545942 TMEM254Q8TBM7 123 aa11□□□□□ -0.65
CHD4-214ENST00000545942 MRPL34Q9BQ48 92 aaKnown RBP11□□□□□ -0.65
CHD4-214ENST00000545942 MMP24-AS1A0A0U1RRL7 71 aa10.99□□□□□ -0.65
CHD4-214ENST00000545942 BATFQ16520 125 aa10.99□□□□□ -0.65
CHD4-214ENST00000545942 KRTAP9-7A8MTY7 169 aa10.98□□□□□ -0.65
CHD4-214ENST00000545942 TSTD3H0UI37 97 aa10.97□□□□□ -0.65
CHD4-214ENST00000545942 KRTAP19-1Q8IUB9 90 aa10.96□□□□□ -0.65
CHD4-214ENST00000545942 FCGBPQ9Y6R7 5405 aaPredicted RBP10.94□□□□□ -0.66
CHD4-214ENST00000545942 H3BT86 120 aa10.94□□□□□ -0.66
CHD4-214ENST00000545942 hDV103S1A0JD37 113 aa10.93□□□□□ -0.66
CHD4-214ENST00000545942 K7EQZ3 153 aa10.93□□□□□ -0.66
CHD4-214ENST00000545942 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
CHD4-214ENST00000545942 NDUFS5O43920 106 aa10.9□□□□□ -0.66
CHD4-214ENST00000545942 A0A1W2PPM0 123 aa10.86□□□□□ -0.67
CHD4-214ENST00000545942 BPY2O14599 106 aa10.85□□□□□ -0.67
CHD4-214ENST00000545942 TAX1BP3O14907 124 aa10.84□□□□□ -0.67
CHD4-214ENST00000545942 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
CHD4-214ENST00000545942 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
CHD4-214ENST00000545942 IGKV2-30P06310 120 aa10.79□□□□□ -0.68
CHD4-214ENST00000545942 Q5W150 140 aa10.77□□□□□ -0.69
CHD4-214ENST00000545942 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.69
CHD4-214ENST00000545942 LINC00846Q9NV44 126 aa10.77□□□□□ -0.69
CHD4-214ENST00000545942 CASC2Q6XLA1 102 aa10.74□□□□□ -0.69
CHD4-214ENST00000545942 Q8N9L7 120 aa10.74□□□□□ -0.69
CHD4-214ENST00000545942 KRTAP19-6Q3LI70 58 aa10.73□□□□□ -0.69
CHD4-214ENST00000545942 HCG22E2RYF7 251 aa10.7□□□□□ -0.7
CHD4-214ENST00000545942 SPCS1Q9Y6A9 102 aa10.7□□□□□ -0.7
CHD4-214ENST00000545942 MACF1Q9UPN3 7388 aaKnown RBP10.68□□□□□ -0.7
CHD4-214ENST00000545942 LOC105371267A0A1B0GV96 52 aa10.67□□□□□ -0.7
CHD4-214ENST00000545942 SMCPP49901 116 aaPredicted RBP10.64□□□□□ -0.71
CHD4-214ENST00000545942 CXCL6P80162 114 aa10.64□□□□□ -0.71
CHD4-214ENST00000545942 C4orf26Q17RF5 130 aa10.62□□□□□ -0.71
CHD4-214ENST00000545942 UBL5Q9BZL1 73 aa10.6□□□□□ -0.71
CHD4-214ENST00000545942 PRO0461Q9UI25 63 aa10.54□□□□□ -0.72
CHD4-214ENST00000545942 COL5A1-AS1Q5SY13 56 aa10.52□□□□□ -0.73
CHD4-214ENST00000545942 SYNE2Q8WXH0 6885 aaKnown RBP10.51□□□□□ -0.73
CHD4-214ENST00000545942 K7EP34 96 aa10.48□□□□□ -0.73
CHD4-214ENST00000545942 C5orf47Q569G3 176 aa10.48□□□□□ -0.73
CHD4-214ENST00000545942 KRTAP3-1Q9BYR8 98 aa10.44□□□□□ -0.74
CHD4-214ENST00000545942 S4R3F8 94 aa10.42□□□□□ -0.74
CHD4-214ENST00000545942 FAM236AA0A1B0GUQ0 79 aa10.4□□□□□ -0.74
CHD4-214ENST00000545942 FAM236BA0A1B0GV22 79 aa10.4□□□□□ -0.74
CHD4-214ENST00000545942 C1orf64Q8NEQ6 169 aa10.4□□□□□ -0.74
CHD4-214ENST00000545942 TP53AIP1Q9HCN2 124 aa10.4□□□□□ -0.74
CHD4-214ENST00000545942 CSAG1Q6PB30 78 aa10.37□□□□□ -0.75
CHD4-214ENST00000545942 LCA10Q71F78 164 aa10.34□□□□□ -0.75
CHD4-214ENST00000545942 GTF2H5Q6ZYL4 71 aa10.33□□□□□ -0.76
CHD4-214ENST00000545942 KRTAP6-3Q3LI67 103 aa10.31□□□□□ -0.76
CHD4-214ENST00000545942 F8W1H4 67 aa10.3□□□□□ -0.76
CHD4-214ENST00000545942 ETDBQ3ZM63 59 aa10.27□□□□□ -0.77
CHD4-214ENST00000545942 SPRR2GQ9BYE4 73 aa10.25□□□□□ -0.77
CHD4-214ENST00000545942 Q5VV11 94 aa10.24□□□□□ -0.77
CHD4-214ENST00000545942 MT1BP07438 61 aa10.23□□□□□ -0.77
CHD4-214ENST00000545942 CYP4F30PQ9H0H9 118 aa10.21□□□□□ -0.78
CHD4-214ENST00000545942 A6NN06 94 aa10.2□□□□□ -0.78
CHD4-214ENST00000545942 KRTAP19-8Q3LI54 63 aa10.19□□□□□ -0.78
CHD4-214ENST00000545942 KLKP1Q107X0 134 aa10.17□□□□□ -0.78
CHD4-214ENST00000545942 KRTAP3-3Q9BYR6 98 aa10.16□□□□□ -0.78
CHD4-214ENST00000545942 TRAV22A0A0B4J277 110 aa10.15□□□□□ -0.78
CHD4-214ENST00000545942 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
CHD4-214ENST00000545942 PCP4L1A6NKN8 68 aa10.09□□□□□ -0.79
CHD4-214ENST00000545942 ACYP1P07311 99 aa10.07□□□□□ -0.8
CHD4-214ENST00000545942 A0A087WVE0 104 aa10.07□□□□□ -0.8
CHD4-214ENST00000545942 KRTAP10-5P60370 271 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms