RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 KRTAP11-1Q8IUC1 163 aa3.9□□□□□ -1.79
SNHG1-225ENST00000545920 ATRQ13535 2644 aa3.9□□□□□ -1.79
SNHG1-225ENST00000545920 HELZ2Q9BYK8 2649 aaKnown RBP3.9□□□□□ -1.79
SNHG1-225ENST00000545920 A0A0G2JQZ4 141 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 NDUFS5O43920 106 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 ZNF861PO60384 105 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 CHTF8P0CG12 524 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 PLAC8Q9NZF1 115 aa3.89□□□□□ -1.79
SNHG1-225ENST00000545920 CUBNO60494 3623 aa3.88□□□□□ -1.79
SNHG1-225ENST00000545920 TENM4Q6N022 2769 aa3.88□□□□□ -1.79
SNHG1-225ENST00000545920 VWFP04275 2813 aa3.88□□□□□ -1.79
SNHG1-225ENST00000545920 CDC42SE1Q9NRR8 79 aa3.88□□□□□ -1.79
SNHG1-225ENST00000545920 SEC61GP60059 68 aa3.87□□□□□ -1.79
SNHG1-225ENST00000545920 SSBP3-AS1Q7Z2R9 100 aa3.87□□□□□ -1.79
SNHG1-225ENST00000545920 A6NED7 52 aa3.86□□□□□ -1.79
SNHG1-225ENST00000545920 DNAH3Q8TD57 4116 aa3.86□□□□□ -1.79
SNHG1-225ENST00000545920 A0A087WTM6 91 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 A0A087X002 238 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 ACYP2P14621 99 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 KTN1-AS1Q86SY8 53 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 OTOGQ6ZRI0 2925 aa3.85□□□□□ -1.79
SNHG1-225ENST00000545920 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.79
SNHG1-225ENST00000545920 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.8
SNHG1-225ENST00000545920 PRB2P02812 416 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-225ENST00000545920 KRTAP13-3Q3SY46 172 aa3.83□□□□□ -1.8
SNHG1-225ENST00000545920 TENM1Q9UKZ4 2725 aa3.83□□□□□ -1.8
SNHG1-225ENST00000545920 PANO1I0J062 215 aa3.82□□□□□ -1.8
SNHG1-225ENST00000545920 RTL8CO15255 209 aa3.82□□□□□ -1.8
SNHG1-225ENST00000545920 HRES1P13985 223 aa3.82□□□□□ -1.8
SNHG1-225ENST00000545920 PCOTHQ58A44 107 aa3.82□□□□□ -1.8
SNHG1-225ENST00000545920 IGLV7-43P04211 117 aa3.81□□□□□ -1.8
SNHG1-225ENST00000545920 IGKV2-30P06310 120 aa3.81□□□□□ -1.8
SNHG1-225ENST00000545920 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
SNHG1-225ENST00000545920 TRRAPQ9Y4A5 3859 aa3.8□□□□□ -1.8
SNHG1-225ENST00000545920 TENM3Q9P273 2699 aa3.8□□□□□ -1.8
SNHG1-225ENST00000545920 F8P00451 2351 aa3.8□□□□□ -1.8
SNHG1-225ENST00000545920 A6NN06 94 aa3.8□□□□□ -1.8
SNHG1-225ENST00000545920 LCA10Q71F78 164 aa3.8□□□□□ -1.8
SNHG1-225ENST00000545920 SPAG11AQ6PDA7 123 aa3.79□□□□□ -1.8
SNHG1-225ENST00000545920 C7orf65Q6ZTY9 151 aa3.79□□□□□ -1.8
SNHG1-225ENST00000545920 LINC00313P59037 77 aa3.77□□□□□ -1.81
SNHG1-225ENST00000545920 C1orf134Q5TEV5 83 aa3.77□□□□□ -1.81
SNHG1-225ENST00000545920 SPTSSBQ8NFR3 76 aa3.77□□□□□ -1.81
SNHG1-225ENST00000545920 Q5W150 140 aa3.75□□□□□ -1.81
SNHG1-225ENST00000545920 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
SNHG1-225ENST00000545920 NOTCH2NLQ7Z3S9 236 aa3.74□□□□□ -1.81
SNHG1-225ENST00000545920 CMYA5Q8N3K9 4069 aa3.73□□□□□ -1.81
SNHG1-225ENST00000545920 ANK2Q01484 3957 aa3.73□□□□□ -1.81
SNHG1-225ENST00000545920 RPS29P62273 56 aaKnown RBP3.73□□□□□ -1.81
SNHG1-225ENST00000545920 CIRBP-AS1Q8TBR5 109 aa3.73□□□□□ -1.81
SNHG1-225ENST00000545920 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
SNHG1-225ENST00000545920 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
SNHG1-225ENST00000545920 A0A1B0GU69 56 aa3.72□□□□□ -1.81
SNHG1-225ENST00000545920 SPINK7P58062 85 aa3.72□□□□□ -1.81
SNHG1-225ENST00000545920 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
SNHG1-225ENST00000545920 SPINK6Q6UWN8 80 aa3.72□□□□□ -1.81
SNHG1-225ENST00000545920 A8MU10 97 aa3.71□□□□□ -1.82
SNHG1-225ENST00000545920 UQCR11O14957 56 aa3.71□□□□□ -1.82
SNHG1-225ENST00000545920 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.71□□□□□ -1.82
SNHG1-225ENST00000545920 RBM12B-AS1Q9P1G2 102 aa3.71□□□□□ -1.82
SNHG1-225ENST00000545920 PKD1L1Q8TDX9 2849 aa3.71□□□□□ -1.82
SNHG1-225ENST00000545920 Q6ZSA8 131 aa3.7□□□□□ -1.82
SNHG1-225ENST00000545920 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
SNHG1-225ENST00000545920 STAB1Q9NY15 2570 aa3.7□□□□□ -1.82
SNHG1-225ENST00000545920 IGKV2D-30A0A075B6S6 120 aa3.69□□□□□ -1.82
SNHG1-225ENST00000545920 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
SNHG1-225ENST00000545920 SPINK1P00995 79 aa3.69□□□□□ -1.82
SNHG1-225ENST00000545920 NOTCH1P46531 2555 aa3.68□□□□□ -1.82
SNHG1-225ENST00000545920 STAB2Q8WWQ8 2551 aa3.66□□□□□ -1.82
SNHG1-225ENST00000545920 UBR4Q5T4S7 5183 aa3.66□□□□□ -1.82
SNHG1-225ENST00000545920 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
SNHG1-225ENST00000545920 KRTAP13-2Q52LG2 175 aa3.66□□□□□ -1.82
SNHG1-225ENST00000545920 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.82
SNHG1-225ENST00000545920 NBEAL1Q6ZS30 2694 aa3.65□□□□□ -1.82
SNHG1-225ENST00000545920 MGAM2Q2M2H8 2515 aa3.64□□□□□ -1.83
SNHG1-225ENST00000545920 KRTAP1-4P0C5Y4 121 aa3.63□□□□□ -1.83
SNHG1-225ENST00000545920 COL6A5A8TX70 2615 aa3.62□□□□□ -1.83
SNHG1-225ENST00000545920 TYMSOSQ8TAI1 123 aa3.62□□□□□ -1.83
SNHG1-225ENST00000545920 DNAH9Q9NYC9 4486 aa3.62□□□□□ -1.83
SNHG1-225ENST00000545920 LY6G6CO95867 125 aa3.61□□□□□ -1.83
SNHG1-225ENST00000545920 RETNLBQ9BQ08 111 aa3.61□□□□□ -1.83
SNHG1-225ENST00000545920 KRTAP10-7P60409 375 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-225ENST00000545920 VPS13DQ5THJ4 4388 aa3.59□□□□□ -1.83
SNHG1-225ENST00000545920 LCE1AQ5T7P2 110 aa3.59□□□□□ -1.83
SNHG1-225ENST00000545920 KRTAP5-11Q6L8G4 156 aa3.59□□□□□ -1.83
SNHG1-225ENST00000545920 DNAH10Q8IVF4 4471 aa3.59□□□□□ -1.83
SNHG1-225ENST00000545920 DNHD1Q96M86 4753 aa3.59□□□□□ -1.83
SNHG1-225ENST00000545920 KRTAP10-1P60331 282 aa3.58□□□□□ -1.84
SNHG1-225ENST00000545920 LINC00304Q8N9R0 145 aa3.58□□□□□ -1.84
SNHG1-225ENST00000545920 C20orf166-AS1Q96NR2 134 aa3.58□□□□□ -1.84
SNHG1-225ENST00000545920 TENM2Q9NT68 2774 aa3.57□□□□□ -1.84
SNHG1-225ENST00000545920 A8MUU9 505 aa3.57□□□□□ -1.84
SNHG1-225ENST00000545920 LYSTQ99698 3801 aa3.56□□□□□ -1.84
SNHG1-225ENST00000545920 LINC01554Q52M75 96 aa3.56□□□□□ -1.84
SNHG1-225ENST00000545920 DNAH6Q9C0G6 4158 aa3.56□□□□□ -1.84
SNHG1-225ENST00000545920 PCLOQ9Y6V0 5065 aa3.55□□□□□ -1.84
SNHG1-225ENST00000545920 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
SNHG1-225ENST00000545920 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms