RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 Q6Q795 121 aa3.4□□□□□ -1.87
LDHC-209ENST00000545848 IMUPQ9GZP8 106 aa3.4□□□□□ -1.87
LDHC-209ENST00000545848 K7ERJ3 54 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 SPINK1P00995 79 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 MP68P56378 58 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 ASB16-AS1Q495Z4 193 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 LINC00575Q6W349 94 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
LDHC-209ENST00000545848 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
LDHC-209ENST00000545848 Q5XG85 94 aa3.38□□□□□ -1.87
LDHC-209ENST00000545848 SPAG11AQ6PDA7 123 aa3.38□□□□□ -1.87
LDHC-209ENST00000545848 Q6ZQY7 126 aa3.38□□□□□ -1.87
LDHC-209ENST00000545848 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
LDHC-209ENST00000545848 VAMP8Q9BV40 100 aa3.38□□□□□ -1.87
LDHC-209ENST00000545848 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
LDHC-209ENST00000545848 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
LDHC-209ENST00000545848 H3BUT2 72 aa3.37□□□□□ -1.87
LDHC-209ENST00000545848 SLC25A34Q6PIV7 304 aa3.37□□□□□ -1.87
LDHC-209ENST00000545848 IGFL1Q6UW32 110 aa3.37□□□□□ -1.87
LDHC-209ENST00000545848 PRR15Q8IV56 129 aa3.37□□□□□ -1.87
LDHC-209ENST00000545848 SMIM26A0A096LP01 95 aa3.36□□□□□ -1.87
LDHC-209ENST00000545848 IGHV6-1A0A0B4J1U7 121 aa3.36□□□□□ -1.87
LDHC-209ENST00000545848 TEX49A0A1B0GTD5 131 aa3.36□□□□□ -1.87
LDHC-209ENST00000545848 UQCR10Q9UDW1 63 aa3.36□□□□□ -1.87
LDHC-209ENST00000545848 TRAV13-2A0A0B4J235 113 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 SLC25A20O43772 301 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 SCGB1C2P0DMR2 95 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 PCOTHQ58A44 107 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 LCE3CQ5T5A8 94 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 CLEC2BQ92478 149 aa3.35□□□□□ -1.87
LDHC-209ENST00000545848 IGLV8-61A0A075B6I0 122 aa3.34□□□□□ -1.87
LDHC-209ENST00000545848 Q96NJ1 140 aa3.34□□□□□ -1.87
LDHC-209ENST00000545848 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
LDHC-209ENST00000545848 A0A0B4J2C4 111 aa3.33□□□□□ -1.88
LDHC-209ENST00000545848 hADV29S1A0JD25 119 aa3.33□□□□□ -1.88
LDHC-209ENST00000545848 MT1HP80294 61 aa3.33□□□□□ -1.88
LDHC-209ENST00000545848 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
LDHC-209ENST00000545848 CEND1Q8N111 149 aa3.33□□□□□ -1.88
LDHC-209ENST00000545848 NHP2Q9NX24 153 aaKnown RBP3.33□□□□□ -1.88
LDHC-209ENST00000545848 HINT1P49773 126 aaPredicted RBP3.32□□□□□ -1.88
LDHC-209ENST00000545848 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
LDHC-209ENST00000545848 A0A1W2PNM2 257 aa3.31□□□□□ -1.88
LDHC-209ENST00000545848 CCDC179H3BU77 68 aa3.31□□□□□ -1.88
LDHC-209ENST00000545848 LST1O00453 97 aa3.31□□□□□ -1.88
LDHC-209ENST00000545848 NAA38Q9BRA0 125 aaKnown RBP3.31□□□□□ -1.88
LDHC-209ENST00000545848 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
LDHC-209ENST00000545848 A8MUN3 132 aa3.3□□□□□ -1.88
LDHC-209ENST00000545848 KRTAP16-1A8MUX0 517 aa3.3□□□□□ -1.88
LDHC-209ENST00000545848 NDUFV3P56181 108 aaKnown RBP3.3□□□□□ -1.88
LDHC-209ENST00000545848 LINC00313P59037 77 aa3.3□□□□□ -1.88
LDHC-209ENST00000545848 TMEM258P61165 79 aa3.3□□□□□ -1.88
LDHC-209ENST00000545848 TAX1BP3O14907 124 aa3.29□□□□□ -1.88
LDHC-209ENST00000545848 RPL37P61927 97 aaKnown RBP3.29□□□□□ -1.88
LDHC-209ENST00000545848 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.29□□□□□ -1.88
LDHC-209ENST00000545848 LCA10Q71F78 164 aa3.29□□□□□ -1.88
LDHC-209ENST00000545848 LIMD2Q9BT23 127 aa3.29□□□□□ -1.88
LDHC-209ENST00000545848 FAM236AA0A1B0GUQ0 79 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 FAM236BA0A1B0GV22 79 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 FABP2P12104 132 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 BVES-AS1Q5T3Y7 98 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 BRK1Q8WUW1 75 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 COPS9Q8WXC6 57 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 RAB37Q96AX2 223 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 OCR1Q9BZK8 76 aa3.28□□□□□ -1.88
LDHC-209ENST00000545848 H3BMG7 143 aa3.27□□□□□ -1.89
LDHC-209ENST00000545848 PRO1854Q9UHT4 67 aa3.27□□□□□ -1.89
LDHC-209ENST00000545848 OBSCN-AS1Q96MR7 158 aa3.26□□□□□ -1.89
LDHC-209ENST00000545848 A0A087WSZ3 146 aa3.25□□□□□ -1.89
LDHC-209ENST00000545848 A0A1B0GW54 56 aa3.25□□□□□ -1.89
LDHC-209ENST00000545848 UQCRQO14949 82 aa3.25□□□□□ -1.89
LDHC-209ENST00000545848 DSCR10P59022 87 aa3.25□□□□□ -1.89
LDHC-209ENST00000545848 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
LDHC-209ENST00000545848 Q6JHZ5 121 aa3.24□□□□□ -1.89
LDHC-209ENST00000545848 PRAC1Q96KF2 57 aa3.24□□□□□ -1.89
LDHC-209ENST00000545848 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
LDHC-209ENST00000545848 F8WEM9 126 aa3.23□□□□□ -1.89
LDHC-209ENST00000545848 TEN1Q86WV5 123 aa3.23□□□□□ -1.89
LDHC-209ENST00000545848 TMEM256-PLSCR3K7ERE1 68 aa3.22□□□□□ -1.89
LDHC-209ENST00000545848 PPDPFLQ8WWR9 84 aa3.22□□□□□ -1.89
LDHC-209ENST00000545848 A8MUU9 505 aa3.21□□□□□ -1.9
LDHC-209ENST00000545848 H0YGX0 51 aa3.21□□□□□ -1.9
LDHC-209ENST00000545848 K7EP34 96 aa3.21□□□□□ -1.9
LDHC-209ENST00000545848 TCL1BO95988 128 aa3.21□□□□□ -1.9
LDHC-209ENST00000545848 CXCL6P80162 114 aa3.21□□□□□ -1.9
LDHC-209ENST00000545848 TRBV7-4A0A0J9YYF1 115 aa3.2□□□□□ -1.9
LDHC-209ENST00000545848 TRACP01848 142 aa3.2□□□□□ -1.9
LDHC-209ENST00000545848 C20orf166-AS1Q96NR2 134 aa3.2□□□□□ -1.9
LDHC-209ENST00000545848 LINC00472Q9H8W2 130 aa3.2□□□□□ -1.9
LDHC-209ENST00000545848 TRBV20-1A0A075B6N2 111 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 A0A1W2PPM0 123 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 H3BT86 120 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 KRTAP4-3Q9BYR4 195 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 ORMDL1Q9P0S3 153 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 SERP1Q9Y6X1 66 aa3.19□□□□□ -1.9
LDHC-209ENST00000545848 USH2AO75445 5202 aa3.18□□□□□ -1.9
LDHC-209ENST00000545848 F8W1H4 67 aa3.18□□□□□ -1.9
LDHC-209ENST00000545848 LINC01554Q52M75 96 aa3.18□□□□□ -1.9
LDHC-209ENST00000545848 SPCS1Q9Y6A9 102 aa3.18□□□□□ -1.9
LDHC-209ENST00000545848 MT-ATP8P03928 68 aa3.17□□□□□ -1.9
LDHC-209ENST00000545848 CCKP06307 115 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms