RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 C9JAW5 83 aa10.03□□□□□ -0.8
CHD4-213ENST00000545584 M0R143 59 aa10.03□□□□□ -0.8
CHD4-213ENST00000545584 J3KT08 172 aa10.01□□□□□ -0.81
CHD4-213ENST00000545584 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
CHD4-213ENST00000545584 SMIM6P0DI80 62 aa10□□□□□ -0.81
CHD4-213ENST00000545584 KRTAP9-8Q9BYQ0 159 aa9.99□□□□□ -0.81
CHD4-213ENST00000545584 HRES1P13985 223 aa9.98□□□□□ -0.81
CHD4-213ENST00000545584 NDUFB1O75438 58 aa9.95□□□□□ -0.82
CHD4-213ENST00000545584 ATXN8Q156A1 80 aa9.95□□□□□ -0.82
CHD4-213ENST00000545584 Q6ZQT0 140 aa9.95□□□□□ -0.82
CHD4-213ENST00000545584 MPLKIPQ8TAP9 179 aa9.95□□□□□ -0.82
CHD4-213ENST00000545584 JMJD7-PLA2G4BH0Y9G9 81 aa9.94□□□□□ -0.82
CHD4-213ENST00000545584 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
CHD4-213ENST00000545584 ZCCHC13Q8WW36 166 aaKnown RBP9.92□□□□□ -0.82
CHD4-213ENST00000545584 A0A1B0GW54 56 aa9.9□□□□□ -0.82
CHD4-213ENST00000545584 TSTD3H0UI37 97 aa9.88□□□□□ -0.83
CHD4-213ENST00000545584 PDE6GP18545 87 aa9.88□□□□□ -0.83
CHD4-213ENST00000545584 LOC110117498A0A087WWA1 95 aa9.87□□□□□ -0.83
CHD4-213ENST00000545584 A8MWP4 228 aa9.86□□□□□ -0.83
CHD4-213ENST00000545584 SPINK7P58062 85 aa9.86□□□□□ -0.83
CHD4-213ENST00000545584 BATFQ16520 125 aa9.86□□□□□ -0.83
CHD4-213ENST00000545584 LYRM7Q5U5X0 104 aa9.85□□□□□ -0.83
CHD4-213ENST00000545584 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
CHD4-213ENST00000545584 MT2AP02795 61 aa9.84□□□□□ -0.83
CHD4-213ENST00000545584 C8orf17Q9NRJ1 99 aa9.83□□□□□ -0.84
CHD4-213ENST00000545584 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
CHD4-213ENST00000545584 LOC105371267A0A1B0GV96 52 aa9.81□□□□□ -0.84
CHD4-213ENST00000545584 IGKV3D-7A0A0C4DH55 119 aa9.79□□□□□ -0.84
CHD4-213ENST00000545584 KRTAP10-10P60014 251 aa9.77□□□□□ -0.85
CHD4-213ENST00000545584 NREPQ16612 68 aa9.77□□□□□ -0.85
CHD4-213ENST00000545584 MT1FP04733 61 aa9.76□□□□□ -0.85
CHD4-213ENST00000545584 Q6ZVQ6 151 aa9.76□□□□□ -0.85
CHD4-213ENST00000545584 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
CHD4-213ENST00000545584 PRR15Q8IV56 129 aa9.74□□□□□ -0.85
CHD4-213ENST00000545584 TAX1BP3O14907 124 aa9.72□□□□□ -0.85
CHD4-213ENST00000545584 WFDC13Q8IUB5 93 aa9.72□□□□□ -0.85
CHD4-213ENST00000545584 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
CHD4-213ENST00000545584 TMEM254Q8TBM7 123 aa9.68□□□□□ -0.86
CHD4-213ENST00000545584 MRPL34Q9BQ48 92 aaKnown RBP9.68□□□□□ -0.86
CHD4-213ENST00000545584 KRTAP9-3Q9BYQ3 159 aa9.68□□□□□ -0.86
CHD4-213ENST00000545584 H3BT86 120 aa9.67□□□□□ -0.86
CHD4-213ENST00000545584 MMP24-AS1A0A0U1RRL7 71 aa9.65□□□□□ -0.86
CHD4-213ENST00000545584 LCE2BO14633 110 aa9.65□□□□□ -0.86
CHD4-213ENST00000545584 USH2AO75445 5202 aa9.63□□□□□ -0.87
CHD4-213ENST00000545584 hDV103S1A0JD37 113 aa9.63□□□□□ -0.87
CHD4-213ENST00000545584 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.63□□□□□ -0.87
CHD4-213ENST00000545584 NDUFS5O43920 106 aa9.62□□□□□ -0.87
CHD4-213ENST00000545584 K7EQZ3 153 aa9.61□□□□□ -0.87
CHD4-213ENST00000545584 BPY2O14599 106 aa9.58□□□□□ -0.88
CHD4-213ENST00000545584 SSPOA2VEC9 5147 aa9.57□□□□□ -0.88
CHD4-213ENST00000545584 SPCS1Q9Y6A9 102 aa9.57□□□□□ -0.88
CHD4-213ENST00000545584 KRTAP9-7A8MTY7 169 aa9.56□□□□□ -0.88
CHD4-213ENST00000545584 KRTAP19-1Q8IUB9 90 aa9.56□□□□□ -0.88
CHD4-213ENST00000545584 H1FX-AS1Q4G0G2 97 aa9.53□□□□□ -0.88
CHD4-213ENST00000545584 SMCPP49901 116 aaPredicted RBP9.51□□□□□ -0.89
CHD4-213ENST00000545584 IGKV2D-30A0A075B6S6 120 aa9.5□□□□□ -0.89
CHD4-213ENST00000545584 IGKV2-30P06310 120 aa9.5□□□□□ -0.89
CHD4-213ENST00000545584 LINC00846Q9NV44 126 aa9.49□□□□□ -0.89
CHD4-213ENST00000545584 C7orf65Q6ZTY9 151 aa9.48□□□□□ -0.89
CHD4-213ENST00000545584 COL5A1-AS1Q5SY13 56 aa9.47□□□□□ -0.89
CHD4-213ENST00000545584 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
CHD4-213ENST00000545584 Q5W150 140 aa9.45□□□□□ -0.9
CHD4-213ENST00000545584 Q8N9L7 120 aa9.44□□□□□ -0.9
CHD4-213ENST00000545584 HCG22E2RYF7 251 aa9.43□□□□□ -0.9
CHD4-213ENST00000545584 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
CHD4-213ENST00000545584 FCGBPQ9Y6R7 5405 aaPredicted RBP9.41□□□□□ -0.9
CHD4-213ENST00000545584 K7EP34 96 aa9.4□□□□□ -0.9
CHD4-213ENST00000545584 CXCL6P80162 114 aa9.38□□□□□ -0.91
CHD4-213ENST00000545584 KRTAP19-6Q3LI70 58 aa9.36□□□□□ -0.91
CHD4-213ENST00000545584 UBL5Q9BZL1 73 aa9.36□□□□□ -0.91
CHD4-213ENST00000545584 C4orf26Q17RF5 130 aa9.33□□□□□ -0.92
CHD4-213ENST00000545584 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
CHD4-213ENST00000545584 GTF2H5Q6ZYL4 71 aa9.27□□□□□ -0.93
CHD4-213ENST00000545584 F8W1H4 67 aa9.21□□□□□ -0.94
CHD4-213ENST00000545584 MACF1Q9UPN3 7388 aaKnown RBP9.2□□□□□ -0.94
CHD4-213ENST00000545584 ETDBQ3ZM63 59 aa9.2□□□□□ -0.94
CHD4-213ENST00000545584 C5orf47Q569G3 176 aa9.2□□□□□ -0.94
CHD4-213ENST00000545584 TP53AIP1Q9HCN2 124 aa9.17□□□□□ -0.94
CHD4-213ENST00000545584 S4R3F8 94 aa9.17□□□□□ -0.94
CHD4-213ENST00000545584 FAM236AA0A1B0GUQ0 79 aa9.16□□□□□ -0.94
CHD4-213ENST00000545584 FAM236BA0A1B0GV22 79 aa9.16□□□□□ -0.94
CHD4-213ENST00000545584 C1orf64Q8NEQ6 169 aa9.16□□□□□ -0.94
CHD4-213ENST00000545584 KRTAP3-1Q9BYR8 98 aa9.14□□□□□ -0.95
CHD4-213ENST00000545584 CSAG1Q6PB30 78 aa9.13□□□□□ -0.95
CHD4-213ENST00000545584 SYNE2Q8WXH0 6885 aaKnown RBP9.11□□□□□ -0.95
CHD4-213ENST00000545584 LCA10Q71F78 164 aa9.07□□□□□ -0.96
CHD4-213ENST00000545584 KRTAP6-3Q3LI67 103 aa8.98□□□□□ -0.97
CHD4-213ENST00000545584 CYP4F30PQ9H0H9 118 aa8.98□□□□□ -0.97
CHD4-213ENST00000545584 Q5VV11 94 aa8.97□□□□□ -0.97
CHD4-213ENST00000545584 ACYP1P07311 99 aa8.96□□□□□ -0.98
CHD4-213ENST00000545584 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
CHD4-213ENST00000545584 TRAV22A0A0B4J277 110 aa8.94□□□□□ -0.98
CHD4-213ENST00000545584 A6NN06 94 aa8.94□□□□□ -0.98
CHD4-213ENST00000545584 LOC101927531A0A1B0GV80 90 aa8.92□□□□□ -0.98
CHD4-213ENST00000545584 FAM240AA0A1B0GVK7 77 aa8.92□□□□□ -0.98
CHD4-213ENST00000545584 MT1BP07438 61 aa8.92□□□□□ -0.98
CHD4-213ENST00000545584 KLKP1Q107X0 134 aa8.92□□□□□ -0.98
CHD4-213ENST00000545584 KRTAP19-8Q3LI54 63 aa8.91□□□□□ -0.98
CHD4-213ENST00000545584 KRTAP3-3Q9BYR6 98 aa8.89□□□□□ -0.99
CHD4-213ENST00000545584 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms