RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 FAM236DA0A1B0GTK5 79 aa10.57□□□□□ -0.72
SCARB1-210ENST00000545493 FAM236CP0DP71 79 aa10.57□□□□□ -0.72
SCARB1-210ENST00000545493 C8orf87E5RJ46 101 aa10.56□□□□□ -0.72
SCARB1-210ENST00000545493 DSCR8Q96T75 97 aa10.56□□□□□ -0.72
SCARB1-210ENST00000545493 TSTD3H0UI37 97 aa10.54□□□□□ -0.72
SCARB1-210ENST00000545493 MT2AP02795 61 aa10.52□□□□□ -0.73
SCARB1-210ENST00000545493 BAALC-AS2P0C853 105 aa10.51□□□□□ -0.73
SCARB1-210ENST00000545493 RBM12B-AS1Q9P1G2 102 aa10.51□□□□□ -0.73
SCARB1-210ENST00000545493 C9JAW5 83 aa10.49□□□□□ -0.73
SCARB1-210ENST00000545493 M0R143 59 aa10.48□□□□□ -0.73
SCARB1-210ENST00000545493 Q6ZQT0 140 aa10.48□□□□□ -0.73
SCARB1-210ENST00000545493 J3KT08 172 aa10.47□□□□□ -0.73
SCARB1-210ENST00000545493 ZCCHC13Q8WW36 166 aaKnown RBP10.46□□□□□ -0.73
SCARB1-210ENST00000545493 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.73
SCARB1-210ENST00000545493 MT1FP04733 61 aa10.45□□□□□ -0.74
SCARB1-210ENST00000545493 C21orf62-AS1Q17RA5 79 aa10.45□□□□□ -0.74
SCARB1-210ENST00000545493 ATXN8Q156A1 80 aa10.42□□□□□ -0.74
SCARB1-210ENST00000545493 Q8N9P0 234 aaPredicted RBP10.4□□□□□ -0.74
SCARB1-210ENST00000545493 LOC110117498A0A087WWA1 95 aa10.39□□□□□ -0.75
SCARB1-210ENST00000545493 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
SCARB1-210ENST00000545493 SPINK7P58062 85 aa10.37□□□□□ -0.75
SCARB1-210ENST00000545493 C8orf17Q9NRJ1 99 aa10.37□□□□□ -0.75
SCARB1-210ENST00000545493 A8MWP4 228 aa10.36□□□□□ -0.75
SCARB1-210ENST00000545493 NDUFB1O75438 58 aa10.36□□□□□ -0.75
SCARB1-210ENST00000545493 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
SCARB1-210ENST00000545493 LCE2BO14633 110 aa10.34□□□□□ -0.75
SCARB1-210ENST00000545493 BATFQ16520 125 aa10.34□□□□□ -0.75
SCARB1-210ENST00000545493 KRTAP9-3Q9BYQ3 159 aa10.34□□□□□ -0.75
SCARB1-210ENST00000545493 A0A1B0GW54 56 aa10.33□□□□□ -0.76
SCARB1-210ENST00000545493 C14orf132Q9NPU4 83 aa10.33□□□□□ -0.76
SCARB1-210ENST00000545493 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
SCARB1-210ENST00000545493 MTURNQ8N3F0 131 aa10.32□□□□□ -0.76
SCARB1-210ENST00000545493 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.31□□□□□ -0.76
SCARB1-210ENST00000545493 KRTAP10-10P60014 251 aa10.3□□□□□ -0.76
SCARB1-210ENST00000545493 PDE6GP18545 87 aa10.29□□□□□ -0.76
SCARB1-210ENST00000545493 Q6ZVQ6 151 aa10.27□□□□□ -0.77
SCARB1-210ENST00000545493 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
SCARB1-210ENST00000545493 TAX1BP3O14907 124 aa10.26□□□□□ -0.77
SCARB1-210ENST00000545493 LYRM7Q5U5X0 104 aa10.25□□□□□ -0.77
SCARB1-210ENST00000545493 PRR15Q8IV56 129 aa10.25□□□□□ -0.77
SCARB1-210ENST00000545493 MMP24-AS1A0A0U1RRL7 71 aa10.24□□□□□ -0.77
SCARB1-210ENST00000545493 C9orf118A6NHY6 69 aa10.23□□□□□ -0.77
SCARB1-210ENST00000545493 KRTAP19-1Q8IUB9 90 aa10.21□□□□□ -0.77
SCARB1-210ENST00000545493 KRTAP9-7A8MTY7 169 aa10.2□□□□□ -0.78
SCARB1-210ENST00000545493 NREPQ16612 68 aa10.2□□□□□ -0.78
SCARB1-210ENST00000545493 TMEM254Q8TBM7 123 aa10.19□□□□□ -0.78
SCARB1-210ENST00000545493 PCP4L1A6NKN8 68 aa10.18□□□□□ -0.78
SCARB1-210ENST00000545493 MRPL34Q9BQ48 92 aaKnown RBP10.18□□□□□ -0.78
SCARB1-210ENST00000545493 A0A1W2PPM0 123 aa10.16□□□□□ -0.78
SCARB1-210ENST00000545493 K7EQZ3 153 aa10.16□□□□□ -0.78
SCARB1-210ENST00000545493 COL5A1-AS1Q5SY13 56 aa10.15□□□□□ -0.78
SCARB1-210ENST00000545493 H3BT86 120 aa10.13□□□□□ -0.79
SCARB1-210ENST00000545493 hDV103S1A0JD37 113 aa10.11□□□□□ -0.79
SCARB1-210ENST00000545493 NDUFS5O43920 106 aa10.06□□□□□ -0.8
SCARB1-210ENST00000545493 BPY2O14599 106 aa10.02□□□□□ -0.81
SCARB1-210ENST00000545493 SPCS1Q9Y6A9 102 aa10.02□□□□□ -0.81
SCARB1-210ENST00000545493 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
SCARB1-210ENST00000545493 Q5W150 140 aa10.01□□□□□ -0.81
SCARB1-210ENST00000545493 MACF1Q9UPN3 7388 aaKnown RBP10.01□□□□□ -0.81
SCARB1-210ENST00000545493 IGKV2D-30A0A075B6S6 120 aa9.99□□□□□ -0.81
SCARB1-210ENST00000545493 IGKV2-30P06310 120 aa9.99□□□□□ -0.81
SCARB1-210ENST00000545493 KRTAP19-6Q3LI70 58 aa9.99□□□□□ -0.81
SCARB1-210ENST00000545493 Q8N9L7 120 aa9.99□□□□□ -0.81
SCARB1-210ENST00000545493 C7orf65Q6ZTY9 151 aa9.97□□□□□ -0.81
SCARB1-210ENST00000545493 K7EP34 96 aa9.95□□□□□ -0.82
SCARB1-210ENST00000545493 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
SCARB1-210ENST00000545493 CASC2Q6XLA1 102 aa9.92□□□□□ -0.82
SCARB1-210ENST00000545493 PRO0461Q9UI25 63 aa9.92□□□□□ -0.82
SCARB1-210ENST00000545493 HCG22E2RYF7 251 aa9.91□□□□□ -0.82
SCARB1-210ENST00000545493 SYNE2Q8WXH0 6885 aaKnown RBP9.91□□□□□ -0.82
SCARB1-210ENST00000545493 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
SCARB1-210ENST00000545493 GTF2H5Q6ZYL4 71 aa9.85□□□□□ -0.83
SCARB1-210ENST00000545493 CXCL6P80162 114 aa9.82□□□□□ -0.84
SCARB1-210ENST00000545493 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
SCARB1-210ENST00000545493 F8W1H4 67 aa9.77□□□□□ -0.85
SCARB1-210ENST00000545493 UBL5Q9BZL1 73 aa9.76□□□□□ -0.85
SCARB1-210ENST00000545493 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
SCARB1-210ENST00000545493 C5orf47Q569G3 176 aa9.69□□□□□ -0.86
SCARB1-210ENST00000545493 A0A1B0GV90 55 aa9.68□□□□□ -0.86
SCARB1-210ENST00000545493 ETDBQ3ZM63 59 aa9.68□□□□□ -0.86
SCARB1-210ENST00000545493 S4R3F8 94 aa9.65□□□□□ -0.86
SCARB1-210ENST00000545493 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
SCARB1-210ENST00000545493 FAM236AA0A1B0GUQ0 79 aa9.6□□□□□ -0.87
SCARB1-210ENST00000545493 FAM236BA0A1B0GV22 79 aa9.6□□□□□ -0.87
SCARB1-210ENST00000545493 LCA10Q71F78 164 aa9.6□□□□□ -0.87
SCARB1-210ENST00000545493 TP53AIP1Q9HCN2 124 aa9.57□□□□□ -0.88
SCARB1-210ENST00000545493 MT1BP07438 61 aa9.55□□□□□ -0.88
SCARB1-210ENST00000545493 KRTAP6-3Q3LI67 103 aa9.55□□□□□ -0.88
SCARB1-210ENST00000545493 CSAG1Q6PB30 78 aa9.53□□□□□ -0.88
SCARB1-210ENST00000545493 SPRR2GQ9BYE4 73 aa9.51□□□□□ -0.89
SCARB1-210ENST00000545493 KRTAP19-8Q3LI54 63 aa9.48□□□□□ -0.89
SCARB1-210ENST00000545493 Q5VV11 94 aa9.47□□□□□ -0.89
SCARB1-210ENST00000545493 KRTAP3-3Q9BYR6 98 aa9.47□□□□□ -0.89
SCARB1-210ENST00000545493 MUC12Q9UKN1 5478 aa9.45□□□□□ -0.9
SCARB1-210ENST00000545493 A6NN06 94 aa9.43□□□□□ -0.9
SCARB1-210ENST00000545493 CYP4F30PQ9H0H9 118 aa9.43□□□□□ -0.9
SCARB1-210ENST00000545493 ACYP1P07311 99 aa9.42□□□□□ -0.9
SCARB1-210ENST00000545493 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
SCARB1-210ENST00000545493 FAM240AA0A1B0GVK7 77 aa9.41□□□□□ -0.9
SCARB1-210ENST00000545493 A0A087WVE0 104 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms