RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 KRTAP1-4P0C5Y4 121 aa3.22□□□□□ -1.89
NPIPB3-214ENST00000545358 COX7CP15954 63 aa3.22□□□□□ -1.89
NPIPB3-214ENST00000545358 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
NPIPB3-214ENST00000545358 Q8N9L7 120 aa3.22□□□□□ -1.89
NPIPB3-214ENST00000545358 TRAV7A0A075B6U4 112 aa3.21□□□□□ -1.9
NPIPB3-214ENST00000545358 A8MWP4 228 aa3.21□□□□□ -1.9
NPIPB3-214ENST00000545358 KRTAP13-2Q52LG2 175 aa3.21□□□□□ -1.9
NPIPB3-214ENST00000545358 Q96NJ1 140 aa3.21□□□□□ -1.9
NPIPB3-214ENST00000545358 A0A087X002 238 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 HCG22E2RYF7 251 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 CCDC179H3BU77 68 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 ASB16-AS1Q495Z4 193 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 Q5XG85 94 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 HRCT1Q6UXD1 115 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 PRR15Q8IV56 129 aa3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 KMT2CQ8NEZ4 4911 aaKnown RBP3.2□□□□□ -1.9
NPIPB3-214ENST00000545358 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
NPIPB3-214ENST00000545358 NDUFB1O75438 58 aa3.19□□□□□ -1.9
NPIPB3-214ENST00000545358 KRTAP10-4P60372 401 aaPredicted RBP3.19□□□□□ -1.9
NPIPB3-214ENST00000545358 LIMD2Q9BT23 127 aa3.19□□□□□ -1.9
NPIPB3-214ENST00000545358 CDK2AP2O75956 126 aa3.18□□□□□ -1.9
NPIPB3-214ENST00000545358 DEFB116Q30KQ4 102 aa3.18□□□□□ -1.9
NPIPB3-214ENST00000545358 PKHD1L1Q86WI1 4243 aa3.17□□□□□ -1.9
NPIPB3-214ENST00000545358 SMR3BP02814 79 aaPredicted RBP3.17□□□□□ -1.9
NPIPB3-214ENST00000545358 RPS29P62273 56 aaKnown RBP3.17□□□□□ -1.9
NPIPB3-214ENST00000545358 TYMSOSQ8TAI1 123 aa3.17□□□□□ -1.9
NPIPB3-214ENST00000545358 OCR1Q9BZK8 76 aa3.17□□□□□ -1.9
NPIPB3-214ENST00000545358 MMP24-AS1A0A0U1RRL7 71 aa3.16□□□□□ -1.9
NPIPB3-214ENST00000545358 A0A1B0GVX0 72 aa3.16□□□□□ -1.9
NPIPB3-214ENST00000545358 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
NPIPB3-214ENST00000545358 SPAG11AQ6PDA7 123 aa3.16□□□□□ -1.9
NPIPB3-214ENST00000545358 CASC2Q6XLA1 102 aa3.16□□□□□ -1.9
NPIPB3-214ENST00000545358 C8orf87E5RJ46 101 aa3.15□□□□□ -1.91
NPIPB3-214ENST00000545358 SPINK1P00995 79 aa3.15□□□□□ -1.91
NPIPB3-214ENST00000545358 WFDC13Q8IUB5 93 aa3.15□□□□□ -1.91
NPIPB3-214ENST00000545358 LINC00304Q8N9R0 145 aa3.15□□□□□ -1.91
NPIPB3-214ENST00000545358 C8orf17Q9NRJ1 99 aa3.15□□□□□ -1.91
NPIPB3-214ENST00000545358 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
NPIPB3-214ENST00000545358 hDV103S1A0JD37 113 aa3.14□□□□□ -1.91
NPIPB3-214ENST00000545358 KLKP1Q107X0 134 aa3.14□□□□□ -1.91
NPIPB3-214ENST00000545358 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
NPIPB3-214ENST00000545358 TMEM254Q8TBM7 123 aa3.14□□□□□ -1.91
NPIPB3-214ENST00000545358 IGHV6-1A0A0B4J1U7 121 aa3.13□□□□□ -1.91
NPIPB3-214ENST00000545358 NDUFC1O43677 76 aa3.13□□□□□ -1.91
NPIPB3-214ENST00000545358 C1orf195Q5TG92 126 aa3.13□□□□□ -1.91
NPIPB3-214ENST00000545358 Q5VSD8 79 aa3.13□□□□□ -1.91
NPIPB3-214ENST00000545358 PRR26Q8N8Z3 221 aa3.13□□□□□ -1.91
NPIPB3-214ENST00000545358 A0A0U1RQV1 116 aa3.12□□□□□ -1.91
NPIPB3-214ENST00000545358 TMEM258P61165 79 aa3.12□□□□□ -1.91
NPIPB3-214ENST00000545358 C5orf47Q569G3 176 aa3.12□□□□□ -1.91
NPIPB3-214ENST00000545358 TP53AIP1Q9HCN2 124 aa3.12□□□□□ -1.91
NPIPB3-214ENST00000545358 RYR3Q15413 4870 aa3.11□□□□□ -1.91
NPIPB3-214ENST00000545358 H3BPC8 53 aa3.11□□□□□ -1.91
NPIPB3-214ENST00000545358 MRPL34Q9BQ48 92 aaKnown RBP3.11□□□□□ -1.91
NPIPB3-214ENST00000545358 CYSTM1Q9H1C7 97 aa3.11□□□□□ -1.91
NPIPB3-214ENST00000545358 HSPG2P98160 4391 aa3.1□□□□□ -1.91
NPIPB3-214ENST00000545358 TRAV22A0A0B4J277 110 aa3.1□□□□□ -1.91
NPIPB3-214ENST00000545358 MP68P56378 58 aa3.1□□□□□ -1.91
NPIPB3-214ENST00000545358 ATP5EP56381 51 aaPredicted RBP3.1□□□□□ -1.91
NPIPB3-214ENST00000545358 RYR1P21817 5038 aa3.09□□□□□ -1.91
NPIPB3-214ENST00000545358 H0Y9P7 68 aa3.09□□□□□ -1.91
NPIPB3-214ENST00000545358 H7BZZ5 65 aa3.09□□□□□ -1.91
NPIPB3-214ENST00000545358 ZCCHC13Q8WW36 166 aaKnown RBP3.09□□□□□ -1.91
NPIPB3-214ENST00000545358 SNURFQ9Y675 71 aa3.09□□□□□ -1.91
NPIPB3-214ENST00000545358 FAT1Q14517 4588 aa3.09□□□□□ -1.92
NPIPB3-214ENST00000545358 NDUFS5O43920 106 aa3.08□□□□□ -1.92
NPIPB3-214ENST00000545358 LINC00313P59037 77 aa3.08□□□□□ -1.92
NPIPB3-214ENST00000545358 NOTCH2NLQ7Z3S9 236 aa3.08□□□□□ -1.92
NPIPB3-214ENST00000545358 Q8N9P0 234 aaPredicted RBP3.08□□□□□ -1.92
NPIPB3-214ENST00000545358 FAM236DA0A1B0GTK5 79 aa3.07□□□□□ -1.92
NPIPB3-214ENST00000545358 FAM236CP0DP71 79 aa3.07□□□□□ -1.92
NPIPB3-214ENST00000545358 KRTAP16-1A8MUX0 517 aa3.06□□□□□ -1.92
NPIPB3-214ENST00000545358 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
NPIPB3-214ENST00000545358 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
NPIPB3-214ENST00000545358 C1orf64Q8NEQ6 169 aa3.05□□□□□ -1.92
NPIPB3-214ENST00000545358 LINC00208Q96KT6 92 aa3.05□□□□□ -1.92
NPIPB3-214ENST00000545358 TNXBP22105 4242 aa3.05□□□□□ -1.92
NPIPB3-214ENST00000545358 LOC101927531A0A1B0GV80 90 aa3.04□□□□□ -1.92
NPIPB3-214ENST00000545358 KRTAP13-3Q3SY46 172 aa3.04□□□□□ -1.92
NPIPB3-214ENST00000545358 FP248Q71RG6 208 aaPredicted RBP3.03□□□□□ -1.92
NPIPB3-214ENST00000545358 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
NPIPB3-214ENST00000545358 FAT3Q8TDW7 4589 aa3.03□□□□□ -1.92
NPIPB3-214ENST00000545358 OXTP01178 125 aa3.02□□□□□ -1.93
NPIPB3-214ENST00000545358 RPS28P62857 69 aaKnown RBP3.02□□□□□ -1.93
NPIPB3-214ENST00000545358 MPLKIPQ8TAP9 179 aa3.02□□□□□ -1.93
NPIPB3-214ENST00000545358 SERP1Q9Y6X1 66 aa3.02□□□□□ -1.93
NPIPB3-214ENST00000545358 MT1HL1P0DM35 61 aa3.01□□□□□ -1.93
NPIPB3-214ENST00000545358 C20orf166-AS1Q96NR2 134 aa3.01□□□□□ -1.93
NPIPB3-214ENST00000545358 CYP4F30PQ9H0H9 118 aa3.01□□□□□ -1.93
NPIPB3-214ENST00000545358 FLG2Q5D862 2391 aaPredicted RBP3.01□□□□□ -1.93
NPIPB3-214ENST00000545358 A8MUU9 505 aa3□□□□□ -1.93
NPIPB3-214ENST00000545358 Q5W150 140 aa3□□□□□ -1.93
NPIPB3-214ENST00000545358 RETNLBQ9BQ08 111 aa3□□□□□ -1.93
NPIPB3-214ENST00000545358 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
NPIPB3-214ENST00000545358 LRP1Q07954 4544 aaKnown RBP2.98□□□□□ -1.93
NPIPB3-214ENST00000545358 IGLV7-46A0A075B6I9 117 aa2.98□□□□□ -1.93
NPIPB3-214ENST00000545358 C9orf92A6NGG3 77 aa2.98□□□□□ -1.93
NPIPB3-214ENST00000545358 Q75L30 129 aa2.98□□□□□ -1.93
NPIPB3-214ENST00000545358 PCOTHQ58A44 107 aa2.97□□□□□ -1.93
NPIPB3-214ENST00000545358 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms