RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585		A8MUU9	505 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585		A8MWP4	228 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	MT-ATP8	P03928	68 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	ZNF22	P17026	224 aa	Predicted RBP	3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	TSPEAR-AS2	P59090	65 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	KRTAP20-1	Q3LI63	56 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	C1orf195	Q5TG92	126 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	SPINT4	Q6UDR6	99 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	ARL17A	Q8IVW1	177 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585	PPDPFL	Q8WWR9	84 aa		3.25	□□□□□ -1.89
CPSF7-222	ENST00000544585		A6NED7	52 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	TIMM17B	O60830	172 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	RPS28	P62857	69 aa	Known RBP	3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	MOBP	Q13875	183 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	ETDB	Q3ZM63	59 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	PCOTH	Q58A44	107 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	TEN1	Q86WV5	123 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585	SMCR5	Q8TEV8	140 aa		3.24	□□□□□ -1.89
CPSF7-222	ENST00000544585		J3KT08	172 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585	IFITM1	P13164	125 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585		Q6Q795	121 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585	COPS9	Q8WXC6	57 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585	SPANXD	Q9BXN6	97 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585	SPANXC	Q9NY87	97 aa		3.23	□□□□□ -1.89
CPSF7-222	ENST00000544585	TCL1B	O95988	128 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	KRTAP10-5	P60370	271 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	ATXN8	Q156A1	80 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	MEIG1	Q5JSS6	88 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	COX6B2	Q6YFQ2	88 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	MUSTN1	Q8IVN3	82 aa		3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585	MACF1	Q9UPN3	7388 aa	Known RBP	3.22	□□□□□ -1.89
CPSF7-222	ENST00000544585		C9JAW5	83 aa		3.21	□□□□□ -1.9
CPSF7-222	ENST00000544585		H3BQ85	93 aa		3.21	□□□□□ -1.9
CPSF7-222	ENST00000544585	COX6C	P09669	75 aa		3.21	□□□□□ -1.9
CPSF7-222	ENST00000544585	SFTA2	Q6UW10	78 aa		3.21	□□□□□ -1.9
CPSF7-222	ENST00000544585	TRBV10-2	A0A0K0K1G8	114 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	ETDC	A0A1B0GVM5	59 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	SPRR1A	P35321	89 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	ADM2	Q7Z4H4	148 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	ANKRD29	Q8N6D5	301 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	KCNQ1DN	Q9H478	68 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585	GPR98	Q8WXG9	6306 aa		3.2	□□□□□ -1.9
CPSF7-222	ENST00000544585		H3BT86	120 aa		3.19	□□□□□ -1.9
CPSF7-222	ENST00000544585		H7C2G1	150 aa		3.19	□□□□□ -1.9
CPSF7-222	ENST00000544585	LINC00158	P58513	81 aa		3.19	□□□□□ -1.9
CPSF7-222	ENST00000544585	USH2A	O75445	5202 aa		3.19	□□□□□ -1.9
CPSF7-222	ENST00000544585	LINC00313	P59037	77 aa		3.18	□□□□□ -1.9
CPSF7-222	ENST00000544585	ZNF625	Q96I27	306 aa	Predicted RBP	3.18	□□□□□ -1.9
CPSF7-222	ENST00000544585	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.17	□□□□□ -1.9
CPSF7-222	ENST00000544585	C9orf92	A6NGG3	77 aa		3.17	□□□□□ -1.9
CPSF7-222	ENST00000544585		Q8NDZ9	215 aa		3.17	□□□□□ -1.9
CPSF7-222	ENST00000544585	LIMD2	Q9BT23	127 aa		3.17	□□□□□ -1.9
CPSF7-222	ENST00000544585	LST1	O00453	97 aa		3.16	□□□□□ -1.9
CPSF7-222	ENST00000544585	IGLV6-57	P01721	117 aa		3.16	□□□□□ -1.9
CPSF7-222	ENST00000544585		Q5XG85	94 aa		3.16	□□□□□ -1.9
CPSF7-222	ENST00000544585	LINC00308	Q8TCZ7	52 aa		3.16	□□□□□ -1.9
CPSF7-222	ENST00000544585	ERC2-IT1	O76042	136 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	SNCG	O76070	127 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	TRAC	P01848	142 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	ACYP1	P07311	99 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	C9orf153	Q5TBE3	101 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	HRCT1	Q6UXD1	115 aa		3.15	□□□□□ -1.91
CPSF7-222	ENST00000544585	TRAV13-2	A0A0B4J235	113 aa		3.14	□□□□□ -1.91
CPSF7-222	ENST00000544585	TRBV10-3	A0A0K0K1G6	114 aa		3.14	□□□□□ -1.91
CPSF7-222	ENST00000544585	TEX49	A0A1B0GTD5	131 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585	NPC2	P61916	151 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585	RPL37	P61927	97 aa	Known RBP	3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585	SOSTDC1	Q6X4U4	206 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585		Q6ZRX8	168 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585	C1orf64	Q8NEQ6	169 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585	CLEC2B	Q92478	149 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585		Q9BRP9	147 aa		3.13	□□□□□ -1.91
CPSF7-222	ENST00000544585		H0YGX0	51 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	NCR3	O14931	201 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	UQCRQ	O14949	82 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	LCE3E	Q5T5B0	92 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	IMUP	Q9GZP8	106 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	LINC00846	Q9NV44	126 aa		3.12	□□□□□ -1.91
CPSF7-222	ENST00000544585	TRBV7-7	A0A0K0K1E9	115 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	FAM236A	A0A1B0GUQ0	79 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	FAM236B	A0A1B0GV22	79 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	BAALC-AS2	P0C853	105 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	LCE1E	Q5T753	118 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	LINC00643	Q86TS7	51 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	LAMTOR3	Q9UHA4	124 aa		3.11	□□□□□ -1.91
CPSF7-222	ENST00000544585	SPRR1B	P22528	89 aa		3.1	□□□□□ -1.91
CPSF7-222	ENST00000544585	KRTAP12-2	P59991	146 aa		3.1	□□□□□ -1.91
CPSF7-222	ENST00000544585	TMEM258	P61165	79 aa		3.1	□□□□□ -1.91
CPSF7-222	ENST00000544585	PMAIP1	Q13794	54 aa		3.1	□□□□□ -1.91
CPSF7-222	ENST00000544585	IGFL1	Q6UW32	110 aa		3.1	□□□□□ -1.91
CPSF7-222	ENST00000544585	FAM236D	A0A1B0GTK5	79 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	DNAL4	O96015	105 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	FAM236C	P0DP71	79 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	S100A7L2	Q5SY68	101 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	ATP11AUN	Q6ZP68	121 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	SMIM11B	Q8TCY0	68 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585		R4GN34	69 aa		3.09	□□□□□ -1.91
CPSF7-222	ENST00000544585	ZNF73	O43830	326 aa	Predicted RBP	3.08	□□□□□ -1.92
CPSF7-222	ENST00000544585	NDUFC2	O95298	119 aa		3.08	□□□□□ -1.92
CPSF7-222	ENST00000544585	COX7C	P15954	63 aa		3.08	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms