RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 MP68P56378 58 aa10□□□□□ -0.81
PTPRO-209ENST00000543886 C8orf17Q9NRJ1 99 aa10□□□□□ -0.81
PTPRO-209ENST00000543886 KRTAP13-2Q52LG2 175 aa9.99□□□□□ -0.81
PTPRO-209ENST00000543886 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
PTPRO-209ENST00000543886 Q1T7F1 81 aa9.97□□□□□ -0.81
PTPRO-209ENST00000543886 KRTAP1-4P0C5Y4 121 aa9.97□□□□□ -0.81
PTPRO-209ENST00000543886 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.82
PTPRO-209ENST00000543886 A0A1B0GVY2 172 aa9.95□□□□□ -0.82
PTPRO-209ENST00000543886 ASB16-AS1Q495Z4 193 aa9.95□□□□□ -0.82
PTPRO-209ENST00000543886 H0Y9P7 68 aa9.94□□□□□ -0.82
PTPRO-209ENST00000543886 KMT2CQ8NEZ4 4911 aaKnown RBP9.92□□□□□ -0.82
PTPRO-209ENST00000543886 TRAV22A0A0B4J277 110 aa9.92□□□□□ -0.82
PTPRO-209ENST00000543886 H3BPC8 53 aa9.92□□□□□ -0.82
PTPRO-209ENST00000543886 PLA2G1BP04054 148 aaKnown RBP9.92□□□□□ -0.82
PTPRO-209ENST00000543886 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
PTPRO-209ENST00000543886 TP53AIP1Q9HCN2 124 aa9.91□□□□□ -0.82
PTPRO-209ENST00000543886 RYR2Q92736 4967 aa9.9□□□□□ -0.82
PTPRO-209ENST00000543886 NDUFS5O43920 106 aa9.89□□□□□ -0.83
PTPRO-209ENST00000543886 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PTPRO-209ENST00000543886 PRR4Q16378 134 aa9.88□□□□□ -0.83
PTPRO-209ENST00000543886 NOTCH2NLQ7Z3S9 236 aa9.87□□□□□ -0.83
PTPRO-209ENST00000543886 V9GYY9 64 aa9.87□□□□□ -0.83
PTPRO-209ENST00000543886 SPANXA2-OT1Q8N9U9 137 aa9.87□□□□□ -0.83
PTPRO-209ENST00000543886 TYMSOSQ8TAI1 123 aa9.87□□□□□ -0.83
PTPRO-209ENST00000543886 LIMD2Q9BT23 127 aa9.87□□□□□ -0.83
PTPRO-209ENST00000543886 SMR3BP02814 79 aaPredicted RBP9.86□□□□□ -0.83
PTPRO-209ENST00000543886 C1orf195Q5TG92 126 aa9.86□□□□□ -0.83
PTPRO-209ENST00000543886 VPS13BQ7Z7G8 4022 aa9.85□□□□□ -0.83
PTPRO-209ENST00000543886 C4orf48Q5BLP8 95 aa9.85□□□□□ -0.83
PTPRO-209ENST00000543886 C8orf87E5RJ46 101 aa9.83□□□□□ -0.84
PTPRO-209ENST00000543886 DYNC1H1Q14204 4646 aaKnown RBP9.81□□□□□ -0.84
PTPRO-209ENST00000543886 PSPHP1O15172 72 aa9.79□□□□□ -0.84
PTPRO-209ENST00000543886 SPINK1P00995 79 aa9.78□□□□□ -0.84
PTPRO-209ENST00000543886 PRR26Q8N8Z3 221 aa9.77□□□□□ -0.85
PTPRO-209ENST00000543886 LINC00313P59037 77 aa9.76□□□□□ -0.85
PTPRO-209ENST00000543886 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
PTPRO-209ENST00000543886 A8MUN3 132 aa9.72□□□□□ -0.85
PTPRO-209ENST00000543886 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
PTPRO-209ENST00000543886 SPAG11AQ6PDA7 123 aa9.71□□□□□ -0.86
PTPRO-209ENST00000543886 APOBP04114 4563 aaKnown RBP9.71□□□□□ -0.86
PTPRO-209ENST00000543886 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
PTPRO-209ENST00000543886 Q5VV11 94 aa9.68□□□□□ -0.86
PTPRO-209ENST00000543886 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
PTPRO-209ENST00000543886 IGLV7-46A0A075B6I9 117 aa9.67□□□□□ -0.86
PTPRO-209ENST00000543886 PCOTHQ58A44 107 aa9.67□□□□□ -0.86
PTPRO-209ENST00000543886 Q5W150 140 aa9.65□□□□□ -0.86
PTPRO-209ENST00000543886 RYR3Q15413 4870 aa9.65□□□□□ -0.86
PTPRO-209ENST00000543886 LOC101927531A0A1B0GV80 90 aa9.64□□□□□ -0.87
PTPRO-209ENST00000543886 FAT1Q14517 4588 aa9.64□□□□□ -0.87
PTPRO-209ENST00000543886 COA5Q86WW8 74 aa9.63□□□□□ -0.87
PTPRO-209ENST00000543886 KRTAP13-3Q3SY46 172 aa9.63□□□□□ -0.87
PTPRO-209ENST00000543886 KRTAP16-1A8MUX0 517 aa9.62□□□□□ -0.87
PTPRO-209ENST00000543886 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
PTPRO-209ENST00000543886 PRR15LQ9BU68 103 aa9.62□□□□□ -0.87
PTPRO-209ENST00000543886 CHKB-CPT1BH3BT56 60 aa9.61□□□□□ -0.87
PTPRO-209ENST00000543886 PMAIP1Q13794 54 aa9.61□□□□□ -0.87
PTPRO-209ENST00000543886 Q75L30 129 aa9.57□□□□□ -0.88
PTPRO-209ENST00000543886 RETNLBQ9BQ08 111 aa9.56□□□□□ -0.88
PTPRO-209ENST00000543886 Q5VSD8 79 aa9.5□□□□□ -0.89
PTPRO-209ENST00000543886 SEC61GP60059 68 aa9.49□□□□□ -0.89
PTPRO-209ENST00000543886 A6NED7 52 aa9.49□□□□□ -0.89
PTPRO-209ENST00000543886 A8MU10 97 aa9.48□□□□□ -0.89
PTPRO-209ENST00000543886 LINC01558Q9Y6Z2 57 aa9.48□□□□□ -0.89
PTPRO-209ENST00000543886 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
PTPRO-209ENST00000543886 HSPG2P98160 4391 aa9.45□□□□□ -0.9
PTPRO-209ENST00000543886 ATP11AUNQ6ZP68 121 aa9.45□□□□□ -0.9
PTPRO-209ENST00000543886 PKHD1L1Q86WI1 4243 aa9.44□□□□□ -0.9
PTPRO-209ENST00000543886 HRES1P13985 223 aa9.43□□□□□ -0.9
PTPRO-209ENST00000543886 LCA10Q71F78 164 aa9.43□□□□□ -0.9
PTPRO-209ENST00000543886 CDC42SE1Q9NRR8 79 aa9.42□□□□□ -0.9
PTPRO-209ENST00000543886 C9orf92A6NGG3 77 aa9.41□□□□□ -0.9
PTPRO-209ENST00000543886 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
PTPRO-209ENST00000543886 IGKV2D-30A0A075B6S6 120 aa9.4□□□□□ -0.9
PTPRO-209ENST00000543886 Q8N1X5 172 aa9.38□□□□□ -0.91
PTPRO-209ENST00000543886 KTN1-AS1Q86SY8 53 aa9.36□□□□□ -0.91
PTPRO-209ENST00000543886 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
PTPRO-209ENST00000543886 RYR1P21817 5038 aa9.35□□□□□ -0.91
PTPRO-209ENST00000543886 ACYP2P14621 99 aa9.34□□□□□ -0.91
PTPRO-209ENST00000543886 C20orf166-AS1Q96NR2 134 aa9.34□□□□□ -0.91
PTPRO-209ENST00000543886 DMAC1Q96GE9 116 aa9.33□□□□□ -0.92
PTPRO-209ENST00000543886 A8MUU9 505 aa9.33□□□□□ -0.92
PTPRO-209ENST00000543886 C7orf65Q6ZTY9 151 aa9.31□□□□□ -0.92
PTPRO-209ENST00000543886 A6NN06 94 aa9.3□□□□□ -0.92
PTPRO-209ENST00000543886 KRTAP17-1Q9BYP8 105 aa9.3□□□□□ -0.92
PTPRO-209ENST00000543886 FLG2Q5D862 2391 aaPredicted RBP9.3□□□□□ -0.92
PTPRO-209ENST00000543886 KIAA1109Q2LD37 5005 aa9.3□□□□□ -0.92
PTPRO-209ENST00000543886 EPPK1P58107 5090 aaKnown RBP9.29□□□□□ -0.92
PTPRO-209ENST00000543886 LRP1Q07954 4544 aaKnown RBP9.27□□□□□ -0.92
PTPRO-209ENST00000543886 SPINK7P58062 85 aa9.27□□□□□ -0.93
PTPRO-209ENST00000543886 TNXBP22105 4242 aa9.23□□□□□ -0.93
PTPRO-209ENST00000543886 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
PTPRO-209ENST00000543886 MYCBP2O75592 4640 aa9.15□□□□□ -0.95
PTPRO-209ENST00000543886 RBM12B-AS1Q9P1G2 102 aa9.14□□□□□ -0.95
PTPRO-209ENST00000543886 FAT3Q8TDW7 4589 aa9.14□□□□□ -0.95
PTPRO-209ENST00000543886 A0A1B0GU69 56 aa9.1□□□□□ -0.95
PTPRO-209ENST00000543886 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
PTPRO-209ENST00000543886 RPL37P61927 97 aaKnown RBP9.05□□□□□ -0.96
PTPRO-209ENST00000543886 XP32Q5T750 250 aa9.04□□□□□ -0.96
PTPRO-209ENST00000543886 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
PTPRO-209ENST00000543886 UQCR11O14957 56 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms