RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 A8MU10 97 aa9.55□□□□□ -0.88
SCNN1A-221ENST00000543768 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
SCNN1A-221ENST00000543768 CD164Q04900 197 aa9.53□□□□□ -0.88
SCNN1A-221ENST00000543768 Q8N9P0 234 aaPredicted RBP9.53□□□□□ -0.88
SCNN1A-221ENST00000543768 LIMD2Q9BT23 127 aa9.53□□□□□ -0.88
SCNN1A-221ENST00000543768 H3BPC8 53 aa9.53□□□□□ -0.88
SCNN1A-221ENST00000543768 H0Y9P7 68 aa9.52□□□□□ -0.88
SCNN1A-221ENST00000543768 PKD1P98161 4303 aa9.52□□□□□ -0.89
SCNN1A-221ENST00000543768 CHKB-CPT1BH3BT56 60 aa9.51□□□□□ -0.89
SCNN1A-221ENST00000543768 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
SCNN1A-221ENST00000543768 Q6ZSA8 131 aa9.5□□□□□ -0.89
SCNN1A-221ENST00000543768 A0A1B0GVX0 72 aa9.49□□□□□ -0.89
SCNN1A-221ENST00000543768 HYDINQ4G0P3 5121 aa9.49□□□□□ -0.89
SCNN1A-221ENST00000543768 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
SCNN1A-221ENST00000543768 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
SCNN1A-221ENST00000543768 FAT2Q9NYQ8 4349 aa9.48□□□□□ -0.89
SCNN1A-221ENST00000543768 IGHV6-1A0A0B4J1U7 121 aa9.47□□□□□ -0.89
SCNN1A-221ENST00000543768 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
SCNN1A-221ENST00000543768 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
SCNN1A-221ENST00000543768 CDK2AP2O75956 126 aa9.44□□□□□ -0.9
SCNN1A-221ENST00000543768 A0A087X002 238 aa9.43□□□□□ -0.9
SCNN1A-221ENST00000543768 Q75L30 129 aa9.43□□□□□ -0.9
SCNN1A-221ENST00000543768 NOTCH2NLQ7Z3S9 236 aa9.43□□□□□ -0.9
SCNN1A-221ENST00000543768 LRP1BQ9NZR2 4599 aa9.43□□□□□ -0.9
SCNN1A-221ENST00000543768 TP53AIP1Q9HCN2 124 aa9.42□□□□□ -0.9
SCNN1A-221ENST00000543768 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
SCNN1A-221ENST00000543768 ATP11AUNQ6ZP68 121 aa9.41□□□□□ -0.9
SCNN1A-221ENST00000543768 LCA10Q71F78 164 aa9.4□□□□□ -0.9
SCNN1A-221ENST00000543768 SPTSSBQ8NFR3 76 aa9.4□□□□□ -0.9
SCNN1A-221ENST00000543768 SPINK6Q6UWN8 80 aa9.39□□□□□ -0.91
SCNN1A-221ENST00000543768 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
SCNN1A-221ENST00000543768 COA5Q86WW8 74 aa9.39□□□□□ -0.91
SCNN1A-221ENST00000543768 KRTAP13-2Q52LG2 175 aa9.38□□□□□ -0.91
SCNN1A-221ENST00000543768 A6NED7 52 aa9.37□□□□□ -0.91
SCNN1A-221ENST00000543768 IGLV7-46A0A075B6I9 117 aa9.37□□□□□ -0.91
SCNN1A-221ENST00000543768 NDUFS5O43920 106 aa9.36□□□□□ -0.91
SCNN1A-221ENST00000543768 RBM12B-AS1Q9P1G2 102 aa9.35□□□□□ -0.91
SCNN1A-221ENST00000543768 A6NN06 94 aa9.34□□□□□ -0.91
SCNN1A-221ENST00000543768 CDC42SE1Q9NRR8 79 aa9.33□□□□□ -0.92
SCNN1A-221ENST00000543768 VPS13BQ7Z7G8 4022 aa9.32□□□□□ -0.92
SCNN1A-221ENST00000543768 KRTAP1-4P0C5Y4 121 aa9.32□□□□□ -0.92
SCNN1A-221ENST00000543768 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
SCNN1A-221ENST00000543768 PCOTHQ58A44 107 aa9.28□□□□□ -0.92
SCNN1A-221ENST00000543768 C8orf87E5RJ46 101 aa9.26□□□□□ -0.93
SCNN1A-221ENST00000543768 Q5W150 140 aa9.25□□□□□ -0.93
SCNN1A-221ENST00000543768 SACSQ9NZJ4 4579 aa9.25□□□□□ -0.93
SCNN1A-221ENST00000543768 KRTAP13-3Q3SY46 172 aa9.24□□□□□ -0.93
SCNN1A-221ENST00000543768 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
SCNN1A-221ENST00000543768 PKHD1P08F94 4074 aa9.22□□□□□ -0.93
SCNN1A-221ENST00000543768 C7orf65Q6ZTY9 151 aa9.22□□□□□ -0.93
SCNN1A-221ENST00000543768 LINC00313P59037 77 aa9.21□□□□□ -0.94
SCNN1A-221ENST00000543768 PLA2G1BP04054 148 aaKnown RBP9.2□□□□□ -0.94
SCNN1A-221ENST00000543768 SPINK7P58062 85 aa9.16□□□□□ -0.94
SCNN1A-221ENST00000543768 HRES1P13985 223 aa9.16□□□□□ -0.94
SCNN1A-221ENST00000543768 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.94
SCNN1A-221ENST00000543768 KRTAP16-1A8MUX0 517 aa9.13□□□□□ -0.95
SCNN1A-221ENST00000543768 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
SCNN1A-221ENST00000543768 SPINK1P00995 79 aa9.1□□□□□ -0.95
SCNN1A-221ENST00000543768 DYNC1H1Q14204 4646 aaKnown RBP9.1□□□□□ -0.95
SCNN1A-221ENST00000543768 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
SCNN1A-221ENST00000543768 FAM229AH3BQW9 127 aa9.09□□□□□ -0.95
SCNN1A-221ENST00000543768 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
SCNN1A-221ENST00000543768 PRR26Q8N8Z3 221 aa9.07□□□□□ -0.96
SCNN1A-221ENST00000543768 RETNLBQ9BQ08 111 aa9.06□□□□□ -0.96
SCNN1A-221ENST00000543768 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
SCNN1A-221ENST00000543768 IGKV2-30P06310 120 aa9.02□□□□□ -0.97
SCNN1A-221ENST00000543768 KRTAP10-4P60372 401 aaPredicted RBP9.01□□□□□ -0.97
SCNN1A-221ENST00000543768 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
SCNN1A-221ENST00000543768 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
SCNN1A-221ENST00000543768 FAT1Q14517 4588 aa8.98□□□□□ -0.97
SCNN1A-221ENST00000543768 DMAC1Q96GE9 116 aa8.95□□□□□ -0.98
SCNN1A-221ENST00000543768 ACYP2P14621 99 aa8.94□□□□□ -0.98
SCNN1A-221ENST00000543768 PRAC1Q96KF2 57 aa8.92□□□□□ -0.98
SCNN1A-221ENST00000543768 PKHD1L1Q86WI1 4243 aa8.92□□□□□ -0.98
SCNN1A-221ENST00000543768 RYR2Q92736 4967 aa8.92□□□□□ -0.98
SCNN1A-221ENST00000543768 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.99
SCNN1A-221ENST00000543768 KMT2CQ8NEZ4 4911 aaKnown RBP8.87□□□□□ -0.99
SCNN1A-221ENST00000543768 ADM2Q7Z4H4 148 aa8.86□□□□□ -0.99
SCNN1A-221ENST00000543768 A0A1B0GU69 56 aa8.84□□□□□ -0.99
SCNN1A-221ENST00000543768 SPATA8Q6RVD6 105 aa8.84□□□□□ -0.99
SCNN1A-221ENST00000543768 LINC01554Q52M75 96 aa8.81□□□□□ -1
SCNN1A-221ENST00000543768 C9orf92A6NGG3 77 aa8.79□□□□□ -1
SCNN1A-221ENST00000543768 A8MUU9 505 aa8.77□□□□□ -1.01
SCNN1A-221ENST00000543768 C20orf166-AS1Q96NR2 134 aa8.77□□□□□ -1.01
SCNN1A-221ENST00000543768 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
SCNN1A-221ENST00000543768 UQCR11O14957 56 aa8.74□□□□□ -1.01
SCNN1A-221ENST00000543768 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.01
SCNN1A-221ENST00000543768 RYR3Q15413 4870 aa8.71□□□□□ -1.02
SCNN1A-221ENST00000543768 Q8N1X5 172 aa8.69□□□□□ -1.02
SCNN1A-221ENST00000543768 HSPG2P98160 4391 aa8.67□□□□□ -1.02
SCNN1A-221ENST00000543768 TNXBP22105 4242 aa8.67□□□□□ -1.02
SCNN1A-221ENST00000543768 LRP1Q07954 4544 aaKnown RBP8.66□□□□□ -1.02
SCNN1A-221ENST00000543768 KRTAP10-8P60410 259 aa8.65□□□□□ -1.02
SCNN1A-221ENST00000543768 Q5VSD8 79 aa8.64□□□□□ -1.03
SCNN1A-221ENST00000543768 FAT3Q8TDW7 4589 aa8.62□□□□□ -1.03
SCNN1A-221ENST00000543768 CSAG1Q6PB30 78 aa8.61□□□□□ -1.03
SCNN1A-221ENST00000543768 KRTAP17-1Q9BYP8 105 aa8.58□□□□□ -1.04
SCNN1A-221ENST00000543768 KRTAP3-1Q9BYR8 98 aa8.57□□□□□ -1.04
SCNN1A-221ENST00000543768 H3BS24 57 aa8.56□□□□□ -1.04
SCNN1A-221ENST00000543768 RYR1P21817 5038 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms