RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 SSBP3-AS1Q7Z2R9 100 aa2.94□□□□□ -1.94
LMO3-229ENST00000543721 ZNF861PO60384 105 aa2.94□□□□□ -1.94
LMO3-229ENST00000543721 NOTCH2NLQ7Z3S9 236 aa2.94□□□□□ -1.94
LMO3-229ENST00000543721 K7EIL1 84 aa2.93□□□□□ -1.94
LMO3-229ENST00000543721 SPACA4Q8TDM5 124 aa2.93□□□□□ -1.94
LMO3-229ENST00000543721 KRTAP1-5Q9BYS1 174 aa2.93□□□□□ -1.94
LMO3-229ENST00000543721 SPINK6Q6UWN8 80 aa2.93□□□□□ -1.94
LMO3-229ENST00000543721 UBR5O95071 2799 aaPredicted RBP2.93□□□□□ -1.94
LMO3-229ENST00000543721 CSAG1Q6PB30 78 aa2.93□□□□□ -1.94
LMO3-229ENST00000543721 IGLV5-52A0A0A0MRZ9 124 aa2.92□□□□□ -1.94
LMO3-229ENST00000543721 IGLV7-43P04211 117 aa2.92□□□□□ -1.94
LMO3-229ENST00000543721 ANK3Q12955 4377 aaKnown RBP2.91□□□□□ -1.94
LMO3-229ENST00000543721 CSMD2Q7Z408 3487 aa2.91□□□□□ -1.94
LMO3-229ENST00000543721 KMT2BQ9UMN6 2715 aaPredicted RBP2.91□□□□□ -1.94
LMO3-229ENST00000543721 NIPBLQ6KC79 2804 aaeCLIP2.91□□□□□ -1.94
LMO3-229ENST00000543721 APLNQ9ULZ1 77 aa2.91□□□□□ -1.94
LMO3-229ENST00000543721 NBDYA0A0U1RRE5 68 aa2.9□□□□□ -1.95
LMO3-229ENST00000543721 PSORS1C2Q9UIG4 136 aa2.9□□□□□ -1.95
LMO3-229ENST00000543721 HIVEP1P15822 2718 aa2.9□□□□□ -1.95
LMO3-229ENST00000543721 IGKV2D-30A0A075B6S6 120 aa2.89□□□□□ -1.95
LMO3-229ENST00000543721 CIRBP-AS1Q8TBR5 109 aa2.89□□□□□ -1.95
LMO3-229ENST00000543721 LY6G6CO95867 125 aa2.89□□□□□ -1.95
LMO3-229ENST00000543721 PANO1I0J062 215 aa2.88□□□□□ -1.95
LMO3-229ENST00000543721 Q6ZRN7 208 aaPredicted RBP2.87□□□□□ -1.95
LMO3-229ENST00000543721 ALMS1Q8TCU4 4167 aa2.87□□□□□ -1.95
LMO3-229ENST00000543721 DYNC2H1Q8NCM8 4307 aaKnown RBP2.87□□□□□ -1.95
LMO3-229ENST00000543721 C1orf134Q5TEV5 83 aa2.87□□□□□ -1.95
LMO3-229ENST00000543721 PDZD2O15018 2839 aa2.86□□□□□ -1.95
LMO3-229ENST00000543721 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
LMO3-229ENST00000543721 TENM2Q9NT68 2774 aa2.86□□□□□ -1.95
LMO3-229ENST00000543721 K7ERS5 55 aa2.86□□□□□ -1.95
LMO3-229ENST00000543721 ANAPC11Q9NYG5 84 aa2.86□□□□□ -1.95
LMO3-229ENST00000543721 A0A087WTM6 91 aa2.85□□□□□ -1.95
LMO3-229ENST00000543721 NUPR2A6NF83 97 aa2.85□□□□□ -1.95
LMO3-229ENST00000543721 KRTAP24-1Q3LI83 254 aa2.85□□□□□ -1.95
LMO3-229ENST00000543721 A8MUU9 505 aa2.85□□□□□ -1.95
LMO3-229ENST00000543721 DNAH7Q8WXX0 4024 aa2.84□□□□□ -1.95
LMO3-229ENST00000543721 KRTAP16-1A8MUX0 517 aa2.84□□□□□ -1.96
LMO3-229ENST00000543721 ROMO1P60602 79 aa2.84□□□□□ -1.96
LMO3-229ENST00000543721 VWFP04275 2813 aa2.84□□□□□ -1.96
LMO3-229ENST00000543721 ZNF469Q96JG9 3925 aaPredicted RBP2.83□□□□□ -1.96
LMO3-229ENST00000543721 XP32Q5T750 250 aa2.83□□□□□ -1.96
LMO3-229ENST00000543721 SEC61BP60468 96 aaKnown RBP2.83□□□□□ -1.96
LMO3-229ENST00000543721 NSD1Q96L73 2696 aaPredicted RBP2.83□□□□□ -1.96
LMO3-229ENST00000543721 DNAH1Q9P2D7 4330 aa2.82□□□□□ -1.96
LMO3-229ENST00000543721 A0A1B0GU33 70 aa2.82□□□□□ -1.96
LMO3-229ENST00000543721 CUBNO60494 3623 aa2.81□□□□□ -1.96
LMO3-229ENST00000543721 SPINK1P00995 79 aa2.81□□□□□ -1.96
LMO3-229ENST00000543721 TENM3Q9P273 2699 aa2.81□□□□□ -1.96
LMO3-229ENST00000543721 Q6ZSA8 131 aa2.81□□□□□ -1.96
LMO3-229ENST00000543721 LINC00304Q8N9R0 145 aa2.81□□□□□ -1.96
LMO3-229ENST00000543721 LOC100996750A0A140TA64 210 aa2.8□□□□□ -1.96
LMO3-229ENST00000543721 KRTAP4-6Q9BYQ5 205 aa2.8□□□□□ -1.96
LMO3-229ENST00000543721 KMT2AQ03164 3969 aa2.8□□□□□ -1.96
LMO3-229ENST00000543721 H0YAA0 97 aa2.8□□□□□ -1.96
LMO3-229ENST00000543721 H1FX-AS1Q4G0G2 97 aa2.8□□□□□ -1.96
LMO3-229ENST00000543721 PKD1L1Q8TDX9 2849 aa2.79□□□□□ -1.96
LMO3-229ENST00000543721 ITPR2Q14571 2701 aa2.79□□□□□ -1.96
LMO3-229ENST00000543721 VPS13DQ5THJ4 4388 aa2.79□□□□□ -1.96
LMO3-229ENST00000543721 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
LMO3-229ENST00000543721 DMBT1Q9UGM3 2413 aaPredicted RBP2.78□□□□□ -1.96
LMO3-229ENST00000543721 FRAS1Q86XX4 4008 aa2.78□□□□□ -1.96
LMO3-229ENST00000543721 Q8N1X5 172 aa2.78□□□□□ -1.97
LMO3-229ENST00000543721 STAB2Q8WWQ8 2551 aa2.77□□□□□ -1.97
LMO3-229ENST00000543721 TENM1Q9UKZ4 2725 aa2.77□□□□□ -1.97
LMO3-229ENST00000543721 KRTAP13-2Q52LG2 175 aa2.76□□□□□ -1.97
LMO3-229ENST00000543721 KRTAP23-1A1A580 65 aa2.76□□□□□ -1.97
LMO3-229ENST00000543721 RPS29P62273 56 aaKnown RBP2.75□□□□□ -1.97
LMO3-229ENST00000543721 SRRM2Q9UQ35 2752 aaKnown RBP2.75□□□□□ -1.97
LMO3-229ENST00000543721 OTOGQ6ZRI0 2925 aa2.75□□□□□ -1.97
LMO3-229ENST00000543721 TENM4Q6N022 2769 aa2.75□□□□□ -1.97
LMO3-229ENST00000543721 KRTAP3-1Q9BYR8 98 aa2.74□□□□□ -1.97
LMO3-229ENST00000543721 TYMSOSQ8TAI1 123 aa2.74□□□□□ -1.97
LMO3-229ENST00000543721 PKHD1P08F94 4074 aa2.73□□□□□ -1.97
LMO3-229ENST00000543721 FAT2Q9NYQ8 4349 aa2.73□□□□□ -1.97
LMO3-229ENST00000543721 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
LMO3-229ENST00000543721 COX6B2Q6YFQ2 88 aa2.72□□□□□ -1.97
LMO3-229ENST00000543721 KRTAP19-1Q8IUB9 90 aa2.72□□□□□ -1.97
LMO3-229ENST00000543721 RPL37P61927 97 aaKnown RBP2.71□□□□□ -1.98
LMO3-229ENST00000543721 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
LMO3-229ENST00000543721 TRRAPQ9Y4A5 3859 aa2.71□□□□□ -1.98
LMO3-229ENST00000543721 KRTAP1-4P0C5Y4 121 aa2.7□□□□□ -1.98
LMO3-229ENST00000543721 C20orf166-AS1Q96NR2 134 aa2.7□□□□□ -1.98
LMO3-229ENST00000543721 P0C880 135 aa2.69□□□□□ -1.98
LMO3-229ENST00000543721 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
LMO3-229ENST00000543721 KRTAP4-8Q9BYQ9 185 aa2.68□□□□□ -1.98
LMO3-229ENST00000543721 DNAH10Q8IVF4 4471 aa2.68□□□□□ -1.98
LMO3-229ENST00000543721 CRIPTQ9P021 101 aa2.67□□□□□ -1.98
LMO3-229ENST00000543721 DNAH9Q9NYC9 4486 aa2.65□□□□□ -1.98
LMO3-229ENST00000543721 DNAH8Q96JB1 4490 aa2.65□□□□□ -1.98
LMO3-229ENST00000543721 TNXBP22105 4242 aa2.65□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP10-2P60368 255 aa2.64□□□□□ -1.99
LMO3-229ENST00000543721 FBN1P35555 2871 aaKnown RBP2.63□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
LMO3-229ENST00000543721 TPRXLQ17RH7 258 aa2.63□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP21-3Q3LHN1 58 aa2.63□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP15-1Q3LI76 137 aa2.63□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP9-2Q9BYQ4 174 aa2.62□□□□□ -1.99
LMO3-229ENST00000543721 DNAH17Q9UFH2 4485 aa2.62□□□□□ -1.99
LMO3-229ENST00000543721 KRTAP9-6A0A140TA67 174 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms