RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
SCNN1A-220ENST00000543585 LORP23490 312 aaPredicted RBP8.12□□□□□ -1.11
SCNN1A-220ENST00000543585 LYRM7Q5U5X0 104 aa8.12□□□□□ -1.11
SCNN1A-220ENST00000543585 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
SCNN1A-220ENST00000543585 KRTAP10-6P60371 365 aaPredicted RBP8.11□□□□□ -1.11
SCNN1A-220ENST00000543585 LCE2DQ5TA82 110 aaPredicted RBP8.09□□□□□ -1.11
SCNN1A-220ENST00000543585 A0A1W2PPM0 123 aa8.08□□□□□ -1.12
SCNN1A-220ENST00000543585 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
SCNN1A-220ENST00000543585 C8orf87E5RJ46 101 aa8.07□□□□□ -1.12
SCNN1A-220ENST00000543585 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
SCNN1A-220ENST00000543585 J3KT08 172 aa8.06□□□□□ -1.12
SCNN1A-220ENST00000543585 PDE6GP18545 87 aa8.05□□□□□ -1.12
SCNN1A-220ENST00000543585 A0A1B0GW54 56 aa8.04□□□□□ -1.12
SCNN1A-220ENST00000543585 M0R2T5 61 aa8.04□□□□□ -1.12
SCNN1A-220ENST00000543585 H3BT86 120 aa8.03□□□□□ -1.12
SCNN1A-220ENST00000543585 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
SCNN1A-220ENST00000543585 A8MWP4 228 aa8.01□□□□□ -1.13
SCNN1A-220ENST00000543585 HRES1P13985 223 aa8□□□□□ -1.13
SCNN1A-220ENST00000543585 KRTAP9-6A0A140TA67 174 aa7.99□□□□□ -1.13
SCNN1A-220ENST00000543585 MPLKIPQ8TAP9 179 aa7.99□□□□□ -1.13
SCNN1A-220ENST00000543585 C8orf17Q9NRJ1 99 aa7.99□□□□□ -1.13
SCNN1A-220ENST00000543585 NDUFB1O75438 58 aa7.97□□□□□ -1.13
SCNN1A-220ENST00000543585 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
SCNN1A-220ENST00000543585 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
SCNN1A-220ENST00000543585 NREPQ16612 68 aa7.96□□□□□ -1.14
SCNN1A-220ENST00000543585 ZCCHC13Q8WW36 166 aaKnown RBP7.96□□□□□ -1.14
SCNN1A-220ENST00000543585 SPCS1Q9Y6A9 102 aa7.96□□□□□ -1.14
SCNN1A-220ENST00000543585 PRR15Q8IV56 129 aa7.94□□□□□ -1.14
SCNN1A-220ENST00000543585 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
SCNN1A-220ENST00000543585 COL5A1-AS1Q5SY13 56 aa7.91□□□□□ -1.14
SCNN1A-220ENST00000543585 Q6ZVQ6 151 aa7.91□□□□□ -1.14
SCNN1A-220ENST00000543585 PRO0461Q9UI25 63 aa7.9□□□□□ -1.14
SCNN1A-220ENST00000543585 K7EQZ3 153 aa7.89□□□□□ -1.15
SCNN1A-220ENST00000543585 KRTAP9-8Q9BYQ0 159 aa7.88□□□□□ -1.15
SCNN1A-220ENST00000543585 FSIP2Q5CZC0 6907 aa7.87□□□□□ -1.15
SCNN1A-220ENST00000543585 FAM236DA0A1B0GTK5 79 aa7.87□□□□□ -1.15
SCNN1A-220ENST00000543585 FAM236CP0DP71 79 aa7.87□□□□□ -1.15
SCNN1A-220ENST00000543585 SPINK7P58062 85 aa7.87□□□□□ -1.15
SCNN1A-220ENST00000543585 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
SCNN1A-220ENST00000543585 K7EP34 96 aa7.85□□□□□ -1.15
SCNN1A-220ENST00000543585 TMEM254Q8TBM7 123 aa7.85□□□□□ -1.15
SCNN1A-220ENST00000543585 MRPL34Q9BQ48 92 aaKnown RBP7.84□□□□□ -1.15
SCNN1A-220ENST00000543585 CRCT1Q9UGL9 99 aa7.84□□□□□ -1.15
SCNN1A-220ENST00000543585 BPY2O14599 106 aa7.83□□□□□ -1.16
SCNN1A-220ENST00000543585 hDV103S1A0JD37 113 aa7.81□□□□□ -1.16
SCNN1A-220ENST00000543585 Q8N9L7 120 aa7.8□□□□□ -1.16
SCNN1A-220ENST00000543585 PCP4L1A6NKN8 68 aa7.79□□□□□ -1.16
SCNN1A-220ENST00000543585 LINC00846Q9NV44 126 aa7.78□□□□□ -1.16
SCNN1A-220ENST00000543585 MT2AP02795 61 aa7.76□□□□□ -1.17
SCNN1A-220ENST00000543585 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
SCNN1A-220ENST00000543585 NDUFS5O43920 106 aa7.74□□□□□ -1.17
SCNN1A-220ENST00000543585 Q5W150 140 aa7.74□□□□□ -1.17
SCNN1A-220ENST00000543585 MT1FP04733 61 aa7.72□□□□□ -1.17
SCNN1A-220ENST00000543585 USH2AO75445 5202 aa7.71□□□□□ -1.18
SCNN1A-220ENST00000543585 CASC2Q6XLA1 102 aa7.7□□□□□ -1.18
SCNN1A-220ENST00000543585 GTF2H5Q6ZYL4 71 aa7.7□□□□□ -1.18
SCNN1A-220ENST00000543585 UBL5Q9BZL1 73 aa7.69□□□□□ -1.18
SCNN1A-220ENST00000543585 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
SCNN1A-220ENST00000543585 ETDBQ3ZM63 59 aa7.68□□□□□ -1.18
SCNN1A-220ENST00000543585 F8W1H4 67 aa7.67□□□□□ -1.18
SCNN1A-220ENST00000543585 IGKV2D-30A0A075B6S6 120 aa7.64□□□□□ -1.19
SCNN1A-220ENST00000543585 IGKV2-30P06310 120 aa7.64□□□□□ -1.19
SCNN1A-220ENST00000543585 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
SCNN1A-220ENST00000543585 KRTAP9-3Q9BYQ3 159 aa7.62□□□□□ -1.19
SCNN1A-220ENST00000543585 C7orf65Q6ZTY9 151 aa7.61□□□□□ -1.19
SCNN1A-220ENST00000543585 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
SCNN1A-220ENST00000543585 LCE2BO14633 110 aa7.59□□□□□ -1.19
SCNN1A-220ENST00000543585 CXCL6P80162 114 aa7.58□□□□□ -1.2
SCNN1A-220ENST00000543585 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
SCNN1A-220ENST00000543585 C4orf26Q17RF5 130 aa7.52□□□□□ -1.21
SCNN1A-220ENST00000543585 KRTAP3-1Q9BYR8 98 aa7.48□□□□□ -1.21
SCNN1A-220ENST00000543585 TP53AIP1Q9HCN2 124 aa7.44□□□□□ -1.22
SCNN1A-220ENST00000543585 FAM240AA0A1B0GVK7 77 aa7.43□□□□□ -1.22
SCNN1A-220ENST00000543585 ACYP1P07311 99 aa7.43□□□□□ -1.22
SCNN1A-220ENST00000543585 FCGBPQ9Y6R7 5405 aaPredicted RBP7.43□□□□□ -1.22
SCNN1A-220ENST00000543585 KRTAP19-1Q8IUB9 90 aa7.41□□□□□ -1.22
SCNN1A-220ENST00000543585 A0A1B0GV90 55 aa7.39□□□□□ -1.23
SCNN1A-220ENST00000543585 C1orf64Q8NEQ6 169 aa7.37□□□□□ -1.23
SCNN1A-220ENST00000543585 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
SCNN1A-220ENST00000543585 C5orf47Q569G3 176 aa7.34□□□□□ -1.23
SCNN1A-220ENST00000543585 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
SCNN1A-220ENST00000543585 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
SCNN1A-220ENST00000543585 TRAV22A0A0B4J277 110 aa7.32□□□□□ -1.24
SCNN1A-220ENST00000543585 HIST1H4AP62805 103 aaKnown RBP7.32□□□□□ -1.24
SCNN1A-220ENST00000543585 S4R3F8 94 aa7.32□□□□□ -1.24
SCNN1A-220ENST00000543585 A0A087WVE0 104 aa7.31□□□□□ -1.24
SCNN1A-220ENST00000543585 LCA10Q71F78 164 aa7.31□□□□□ -1.24
SCNN1A-220ENST00000543585 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
SCNN1A-220ENST00000543585 LINC00643Q86TS7 51 aa7.28□□□□□ -1.24
SCNN1A-220ENST00000543585 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
SCNN1A-220ENST00000543585 KRTAP3-3Q9BYR6 98 aa7.26□□□□□ -1.25
SCNN1A-220ENST00000543585 UQCRQO14949 82 aa7.25□□□□□ -1.25
SCNN1A-220ENST00000543585 H0Y9P7 68 aa7.23□□□□□ -1.25
SCNN1A-220ENST00000543585 CSAG1Q6PB30 78 aa7.23□□□□□ -1.25
SCNN1A-220ENST00000543585 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
SCNN1A-220ENST00000543585 FAM236AA0A1B0GUQ0 79 aa7.18□□□□□ -1.26
SCNN1A-220ENST00000543585 FAM236BA0A1B0GV22 79 aa7.18□□□□□ -1.26
SCNN1A-220ENST00000543585 ATOX1O00244 68 aa7.17□□□□□ -1.26
SCNN1A-220ENST00000543585 OCR1Q9BZK8 76 aa7.16□□□□□ -1.26
SCNN1A-220ENST00000543585 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms