RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ANAPC11Q9NYG5 84 aa8.05□□□□□ -1.12
PPME1-208ENST00000543525 PCLOQ9Y6V0 5065 aa8.05□□□□□ -1.12
PPME1-208ENST00000543525 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
PPME1-208ENST00000543525 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
PPME1-208ENST00000543525 V9GYY9 64 aa8.03□□□□□ -1.12
PPME1-208ENST00000543525 NDUFS5O43920 106 aa8.01□□□□□ -1.13
PPME1-208ENST00000543525 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
PPME1-208ENST00000543525 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
PPME1-208ENST00000543525 CD164Q04900 197 aa7.98□□□□□ -1.13
PPME1-208ENST00000543525 RYR1P21817 5038 aa7.98□□□□□ -1.13
PPME1-208ENST00000543525 LY6G6CO95867 125 aa7.97□□□□□ -1.13
PPME1-208ENST00000543525 SSBP3-AS1Q7Z2R9 100 aa7.96□□□□□ -1.13
PPME1-208ENST00000543525 PSPHP1O15172 72 aa7.95□□□□□ -1.14
PPME1-208ENST00000543525 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
PPME1-208ENST00000543525 CIRBP-AS1Q8TBR5 109 aa7.95□□□□□ -1.14
PPME1-208ENST00000543525 DNAH17Q9UFH2 4485 aa7.95□□□□□ -1.14
PPME1-208ENST00000543525 HECTD4Q9Y4D8 3996 aa7.95□□□□□ -1.14
PPME1-208ENST00000543525 C1orf195Q5TG92 126 aa7.94□□□□□ -1.14
PPME1-208ENST00000543525 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
PPME1-208ENST00000543525 SPINK6Q6UWN8 80 aa7.93□□□□□ -1.14
PPME1-208ENST00000543525 COA5Q86WW8 74 aa7.93□□□□□ -1.14
PPME1-208ENST00000543525 A0A087X002 238 aa7.93□□□□□ -1.14
PPME1-208ENST00000543525 NOTCH2NLQ7Z3S9 236 aa7.93□□□□□ -1.14
PPME1-208ENST00000543525 LIMD2Q9BT23 127 aa7.92□□□□□ -1.14
PPME1-208ENST00000543525 Q8N9P0 234 aaPredicted RBP7.91□□□□□ -1.14
PPME1-208ENST00000543525 A8MUN3 132 aa7.91□□□□□ -1.14
PPME1-208ENST00000543525 C8orf87E5RJ46 101 aa7.9□□□□□ -1.14
PPME1-208ENST00000543525 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
PPME1-208ENST00000543525 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
PPME1-208ENST00000543525 FRAS1Q86XX4 4008 aa7.87□□□□□ -1.15
PPME1-208ENST00000543525 DNAH8Q96JB1 4490 aa7.87□□□□□ -1.15
PPME1-208ENST00000543525 Q5VV11 94 aa7.86□□□□□ -1.15
PPME1-208ENST00000543525 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
PPME1-208ENST00000543525 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
PPME1-208ENST00000543525 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
PPME1-208ENST00000543525 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
PPME1-208ENST00000543525 Q5W150 140 aa7.82□□□□□ -1.16
PPME1-208ENST00000543525 Q6ZSA8 131 aa7.82□□□□□ -1.16
PPME1-208ENST00000543525 KMT2AQ03164 3969 aa7.81□□□□□ -1.16
PPME1-208ENST00000543525 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
PPME1-208ENST00000543525 LINC00313P59037 77 aa7.81□□□□□ -1.16
PPME1-208ENST00000543525 HRES1P13985 223 aa7.8□□□□□ -1.16
PPME1-208ENST00000543525 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
PPME1-208ENST00000543525 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
PPME1-208ENST00000543525 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
PPME1-208ENST00000543525 Q75L30 129 aa7.78□□□□□ -1.16
PPME1-208ENST00000543525 LINC01558Q9Y6Z2 57 aa7.77□□□□□ -1.17
PPME1-208ENST00000543525 FAM229AH3BQW9 127 aa7.76□□□□□ -1.17
PPME1-208ENST00000543525 LCE2BO14633 110 aa7.76□□□□□ -1.17
PPME1-208ENST00000543525 ABCA13Q86UQ4 5058 aa7.75□□□□□ -1.17
PPME1-208ENST00000543525 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
PPME1-208ENST00000543525 ACYP2P14621 99 aa7.72□□□□□ -1.17
PPME1-208ENST00000543525 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
PPME1-208ENST00000543525 A6NED7 52 aa7.71□□□□□ -1.18
PPME1-208ENST00000543525 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
PPME1-208ENST00000543525 RETNLBQ9BQ08 111 aa7.68□□□□□ -1.18
PPME1-208ENST00000543525 DNAH5Q8TE73 4624 aa7.68□□□□□ -1.18
PPME1-208ENST00000543525 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
PPME1-208ENST00000543525 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
PPME1-208ENST00000543525 DNAH11Q96DT5 4516 aa7.67□□□□□ -1.18
PPME1-208ENST00000543525 A8MU10 97 aa7.66□□□□□ -1.18
PPME1-208ENST00000543525 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
PPME1-208ENST00000543525 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
PPME1-208ENST00000543525 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.18
PPME1-208ENST00000543525 LCA10Q71F78 164 aa7.64□□□□□ -1.19
PPME1-208ENST00000543525 DYNC1H1Q14204 4646 aaKnown RBP7.64□□□□□ -1.19
PPME1-208ENST00000543525 SPINK1P00995 79 aa7.64□□□□□ -1.19
PPME1-208ENST00000543525 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
PPME1-208ENST00000543525 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
PPME1-208ENST00000543525 PMAIP1Q13794 54 aa7.62□□□□□ -1.19
PPME1-208ENST00000543525 ATP11AUNQ6ZP68 121 aa7.62□□□□□ -1.19
PPME1-208ENST00000543525 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
PPME1-208ENST00000543525 PKD1P98161 4303 aa7.59□□□□□ -1.19
PPME1-208ENST00000543525 A0A1B0GVY2 172 aa7.58□□□□□ -1.2
PPME1-208ENST00000543525 IGKV2D-30A0A075B6S6 120 aa7.57□□□□□ -1.2
PPME1-208ENST00000543525 SPINK7P58062 85 aa7.57□□□□□ -1.2
PPME1-208ENST00000543525 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
PPME1-208ENST00000543525 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
PPME1-208ENST00000543525 LINC00304Q8N9R0 145 aa7.56□□□□□ -1.2
PPME1-208ENST00000543525 PKHD1P08F94 4074 aa7.56□□□□□ -1.2
PPME1-208ENST00000543525 LRP1BQ9NZR2 4599 aa7.55□□□□□ -1.2
PPME1-208ENST00000543525 HERC1Q15751 4861 aa7.53□□□□□ -1.2
PPME1-208ENST00000543525 C7orf65Q6ZTY9 151 aa7.5□□□□□ -1.21
PPME1-208ENST00000543525 HSPG2P98160 4391 aa7.5□□□□□ -1.21
PPME1-208ENST00000543525 A0A1B0GU69 56 aa7.49□□□□□ -1.21
PPME1-208ENST00000543525 A6NN06 94 aa7.48□□□□□ -1.21
PPME1-208ENST00000543525 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
PPME1-208ENST00000543525 SMR3BP02814 79 aaPredicted RBP7.44□□□□□ -1.22
PPME1-208ENST00000543525 VPS13BQ7Z7G8 4022 aa7.44□□□□□ -1.22
PPME1-208ENST00000543525 LCE2CQ5TA81 110 aa7.43□□□□□ -1.22
PPME1-208ENST00000543525 Q8N1X5 172 aa7.39□□□□□ -1.23
PPME1-208ENST00000543525 A8MUU9 505 aa7.37□□□□□ -1.23
PPME1-208ENST00000543525 SEC61GP60059 68 aa7.37□□□□□ -1.23
PPME1-208ENST00000543525 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
PPME1-208ENST00000543525 C20orf166-AS1Q96NR2 134 aa7.37□□□□□ -1.23
PPME1-208ENST00000543525 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
PPME1-208ENST00000543525 UQCR11O14957 56 aa7.36□□□□□ -1.23
PPME1-208ENST00000543525 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
PPME1-208ENST00000543525 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
PPME1-208ENST00000543525 MIR22HGQ0VDD5 57 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms