RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
TRIM59-208ENST00000543469 SNURFQ9Y675 71 aa4.55□□□□□ -1.68
TRIM59-208ENST00000543469 OCR1Q9BZK8 76 aa4.55□□□□□ -1.68
TRIM59-208ENST00000543469 A8MUN3 132 aa4.54□□□□□ -1.68
TRIM59-208ENST00000543469 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
TRIM59-208ENST00000543469 PRR15LQ9BU68 103 aa4.54□□□□□ -1.68
TRIM59-208ENST00000543469 Q75L30 129 aa4.53□□□□□ -1.68
TRIM59-208ENST00000543469 CMYA5Q8N3K9 4069 aa4.53□□□□□ -1.68
TRIM59-208ENST00000543469 TENM2Q9NT68 2774 aa4.53□□□□□ -1.68
TRIM59-208ENST00000543469 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
TRIM59-208ENST00000543469 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
TRIM59-208ENST00000543469 MEGF8Q7Z7M0 2845 aa4.52□□□□□ -1.69
TRIM59-208ENST00000543469 CCDC179H3BU77 68 aa4.52□□□□□ -1.69
TRIM59-208ENST00000543469 DYNC2H1Q8NCM8 4307 aaKnown RBP4.52□□□□□ -1.69
TRIM59-208ENST00000543469 PCOTHQ58A44 107 aa4.51□□□□□ -1.69
TRIM59-208ENST00000543469 A0A0U1RQV1 116 aa4.5□□□□□ -1.69
TRIM59-208ENST00000543469 VPS13DQ5THJ4 4388 aa4.5□□□□□ -1.69
TRIM59-208ENST00000543469 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
TRIM59-208ENST00000543469 TPRXLQ17RH7 258 aa4.49□□□□□ -1.69
TRIM59-208ENST00000543469 RPL37P61927 97 aaKnown RBP4.47□□□□□ -1.69
TRIM59-208ENST00000543469 C20orf166-AS1Q96NR2 134 aa4.47□□□□□ -1.69
TRIM59-208ENST00000543469 A8MUU9 505 aa4.47□□□□□ -1.69
TRIM59-208ENST00000543469 KRTAP10-4P60372 401 aaPredicted RBP4.46□□□□□ -1.7
TRIM59-208ENST00000543469 Q5W150 140 aa4.45□□□□□ -1.7
TRIM59-208ENST00000543469 SMIM26A0A096LP01 95 aa4.44□□□□□ -1.7
TRIM59-208ENST00000543469 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
TRIM59-208ENST00000543469 DNAH1Q9P2D7 4330 aa4.44□□□□□ -1.7
TRIM59-208ENST00000543469 PLECQ15149 4684 aaKnown RBP4.44□□□□□ -1.7
TRIM59-208ENST00000543469 CYP4F30PQ9H0H9 118 aa4.44□□□□□ -1.7
TRIM59-208ENST00000543469 RPS28P62857 69 aaKnown RBP4.43□□□□□ -1.7
TRIM59-208ENST00000543469 CUBNO60494 3623 aa4.43□□□□□ -1.7
TRIM59-208ENST00000543469 DNAH10Q8IVF4 4471 aa4.41□□□□□ -1.7
TRIM59-208ENST00000543469 SPINK7P58062 85 aa4.41□□□□□ -1.7
TRIM59-208ENST00000543469 H7BZZ5 65 aa4.39□□□□□ -1.71
TRIM59-208ENST00000543469 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
TRIM59-208ENST00000543469 DNAH17Q9UFH2 4485 aa4.38□□□□□ -1.71
TRIM59-208ENST00000543469 TGP01266 2768 aa4.38□□□□□ -1.71
TRIM59-208ENST00000543469 HRES1P13985 223 aa4.37□□□□□ -1.71
TRIM59-208ENST00000543469 NOTCH2NLQ7Z3S9 236 aa4.37□□□□□ -1.71
TRIM59-208ENST00000543469 XP32Q5T750 250 aa4.37□□□□□ -1.71
TRIM59-208ENST00000543469 DNHD1Q96M86 4753 aa4.37□□□□□ -1.71
TRIM59-208ENST00000543469 PRKDCP78527 4128 aaKnown RBP4.36□□□□□ -1.71
TRIM59-208ENST00000543469 DNAH11Q96DT5 4516 aa4.36□□□□□ -1.71
TRIM59-208ENST00000543469 COA5Q86WW8 74 aa4.36□□□□□ -1.71
TRIM59-208ENST00000543469 DNAH7Q8WXX0 4024 aa4.35□□□□□ -1.71
TRIM59-208ENST00000543469 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
TRIM59-208ENST00000543469 K7ERS5 55 aa4.34□□□□□ -1.71
TRIM59-208ENST00000543469 MT1HL1P0DM35 61 aa4.33□□□□□ -1.72
TRIM59-208ENST00000543469 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
TRIM59-208ENST00000543469 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
TRIM59-208ENST00000543469 S4R3F8 94 aa4.31□□□□□ -1.72
TRIM59-208ENST00000543469 A0A1B0GU69 56 aa4.3□□□□□ -1.72
TRIM59-208ENST00000543469 CSAG1Q6PB30 78 aa4.3□□□□□ -1.72
TRIM59-208ENST00000543469 H1FX-AS1Q4G0G2 97 aa4.29□□□□□ -1.72
TRIM59-208ENST00000543469 C4orf26Q17RF5 130 aa4.28□□□□□ -1.72
TRIM59-208ENST00000543469 DNAH2Q9P225 4427 aa4.28□□□□□ -1.72
TRIM59-208ENST00000543469 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
TRIM59-208ENST00000543469 DNAH8Q96JB1 4490 aa4.26□□□□□ -1.73
TRIM59-208ENST00000543469 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
TRIM59-208ENST00000543469 MPLKIPQ8TAP9 179 aa4.26□□□□□ -1.73
TRIM59-208ENST00000543469 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
TRIM59-208ENST00000543469 A6NED7 52 aa4.22□□□□□ -1.73
TRIM59-208ENST00000543469 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.74
TRIM59-208ENST00000543469 M0R2T5 61 aa4.19□□□□□ -1.74
TRIM59-208ENST00000543469 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
TRIM59-208ENST00000543469 Q1T7F1 81 aa4.19□□□□□ -1.74
TRIM59-208ENST00000543469 RYR2Q92736 4967 aa4.19□□□□□ -1.74
TRIM59-208ENST00000543469 UQCR11O14957 56 aa4.18□□□□□ -1.74
TRIM59-208ENST00000543469 LINC01558Q9Y6Z2 57 aa4.18□□□□□ -1.74
TRIM59-208ENST00000543469 DNAH5Q8TE73 4624 aa4.18□□□□□ -1.74
TRIM59-208ENST00000543469 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
TRIM59-208ENST00000543469 SACSQ9NZJ4 4579 aa4.16□□□□□ -1.74
TRIM59-208ENST00000543469 LRP1BQ9NZR2 4599 aa4.13□□□□□ -1.75
TRIM59-208ENST00000543469 PSPHP1O15172 72 aa4.12□□□□□ -1.75
TRIM59-208ENST00000543469 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
TRIM59-208ENST00000543469 CYSTM1Q9H1C7 97 aa4.11□□□□□ -1.75
TRIM59-208ENST00000543469 A0A1B0GU33 70 aa4.09□□□□□ -1.75
TRIM59-208ENST00000543469 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.76
TRIM59-208ENST00000543469 CRIPTQ9P021 101 aa4.06□□□□□ -1.76
TRIM59-208ENST00000543469 KMT2AQ03164 3969 aa4.06□□□□□ -1.76
TRIM59-208ENST00000543469 M0QZ58 72 aa4.06□□□□□ -1.76
TRIM59-208ENST00000543469 CSMD3Q7Z407 3707 aa4.05□□□□□ -1.76
TRIM59-208ENST00000543469 RYR1P21817 5038 aa4.05□□□□□ -1.76
TRIM59-208ENST00000543469 BIRC6Q9NR09 4857 aa4.04□□□□□ -1.76
TRIM59-208ENST00000543469 R4GN34 69 aa4.04□□□□□ -1.76
TRIM59-208ENST00000543469 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.76
TRIM59-208ENST00000543469 APOBP04114 4563 aaKnown RBP4.03□□□□□ -1.76
TRIM59-208ENST00000543469 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
TRIM59-208ENST00000543469 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
TRIM59-208ENST00000543469 FRAS1Q86XX4 4008 aa4.02□□□□□ -1.77
TRIM59-208ENST00000543469 LCA10Q71F78 164 aa4.02□□□□□ -1.77
TRIM59-208ENST00000543469 H0YAA0 97 aa4.01□□□□□ -1.77
TRIM59-208ENST00000543469 PKHD1L1Q86WI1 4243 aa4.01□□□□□ -1.77
TRIM59-208ENST00000543469 PKD1P98161 4303 aa4□□□□□ -1.77
TRIM59-208ENST00000543469 VPS13BQ7Z7G8 4022 aa3.99□□□□□ -1.77
TRIM59-208ENST00000543469 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
TRIM59-208ENST00000543469 LYSTQ99698 3801 aa3.96□□□□□ -1.77
TRIM59-208ENST00000543469 HYDINQ4G0P3 5121 aa3.96□□□□□ -1.77
TRIM59-208ENST00000543469 Q5VV11 94 aa3.95□□□□□ -1.78
TRIM59-208ENST00000543469 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms