RNA–Protein interactions for RNA: ENST00000543382.6

BECN1-203, Transcript of beclin 1, humanhuman

TSL 2

Gene BECN1, Length 2,504 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-203ENST00000543382 KRTAP10-1P60331 282 aa9.58□□□□□ -0.88
BECN1-203ENST00000543382 NOTCH2NLQ7Z3S9 236 aa9.58□□□□□ -0.88
BECN1-203ENST00000543382 CYP4F30PQ9H0H9 118 aa9.56□□□□□ -0.88
BECN1-203ENST00000543382 VPS13BQ7Z7G8 4022 aa9.55□□□□□ -0.88
BECN1-203ENST00000543382 H3BPC8 53 aa9.55□□□□□ -0.88
BECN1-203ENST00000543382 Q6ZSA8 131 aa9.54□□□□□ -0.88
BECN1-203ENST00000543382 SPINK6Q6UWN8 80 aa9.53□□□□□ -0.88
BECN1-203ENST00000543382 CDK2AP2O75956 126 aa9.53□□□□□ -0.88
BECN1-203ENST00000543382 NDUFS5O43920 106 aa9.5□□□□□ -0.89
BECN1-203ENST00000543382 MRPL34Q9BQ48 92 aaKnown RBP9.49□□□□□ -0.89
BECN1-203ENST00000543382 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
BECN1-203ENST00000543382 PKHD1P08F94 4074 aa9.49□□□□□ -0.89
BECN1-203ENST00000543382 SSBP3-AS1Q7Z2R9 100 aa9.48□□□□□ -0.89
BECN1-203ENST00000543382 KRTAP13-2Q52LG2 175 aa9.48□□□□□ -0.89
BECN1-203ENST00000543382 SPANXA2-OT1Q8N9U9 137 aa9.47□□□□□ -0.89
BECN1-203ENST00000543382 SACSQ9NZJ4 4579 aa9.47□□□□□ -0.89
BECN1-203ENST00000543382 CD164Q04900 197 aa9.47□□□□□ -0.89
BECN1-203ENST00000543382 PCOTHQ58A44 107 aa9.44□□□□□ -0.9
BECN1-203ENST00000543382 KRTAP1-4P0C5Y4 121 aa9.4□□□□□ -0.9
BECN1-203ENST00000543382 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
BECN1-203ENST00000543382 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
BECN1-203ENST00000543382 Q1T7F1 81 aa9.38□□□□□ -0.91
BECN1-203ENST00000543382 Q5W150 140 aa9.38□□□□□ -0.91
BECN1-203ENST00000543382 PSPHP1O15172 72 aa9.36□□□□□ -0.91
BECN1-203ENST00000543382 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
BECN1-203ENST00000543382 KRTAP13-3Q3SY46 172 aa9.34□□□□□ -0.91
BECN1-203ENST00000543382 DYNC1H1Q14204 4646 aaKnown RBP9.33□□□□□ -0.92
BECN1-203ENST00000543382 C8orf87E5RJ46 101 aa9.31□□□□□ -0.92
BECN1-203ENST00000543382 COA5Q86WW8 74 aa9.31□□□□□ -0.92
BECN1-203ENST00000543382 Q8N9P0 234 aaPredicted RBP9.3□□□□□ -0.92
BECN1-203ENST00000543382 LINC00313P59037 77 aa9.3□□□□□ -0.92
BECN1-203ENST00000543382 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
BECN1-203ENST00000543382 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
BECN1-203ENST00000543382 A8MUN3 132 aa9.24□□□□□ -0.93
BECN1-203ENST00000543382 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
BECN1-203ENST00000543382 FAT1Q14517 4588 aa9.24□□□□□ -0.93
BECN1-203ENST00000543382 TYMSOSQ8TAI1 123 aa9.23□□□□□ -0.93
BECN1-203ENST00000543382 KRTAP16-1A8MUX0 517 aa9.23□□□□□ -0.93
BECN1-203ENST00000543382 V9GYY9 64 aa9.23□□□□□ -0.93
BECN1-203ENST00000543382 LIMD2Q9BT23 127 aa9.22□□□□□ -0.93
BECN1-203ENST00000543382 APOBP04114 4563 aaKnown RBP9.22□□□□□ -0.93
BECN1-203ENST00000543382 HRES1P13985 223 aa9.21□□□□□ -0.94
BECN1-203ENST00000543382 SMR3BP02814 79 aaPredicted RBP9.2□□□□□ -0.94
BECN1-203ENST00000543382 C4orf48Q5BLP8 95 aa9.18□□□□□ -0.94
BECN1-203ENST00000543382 Q5VV11 94 aa9.17□□□□□ -0.94
BECN1-203ENST00000543382 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
BECN1-203ENST00000543382 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
BECN1-203ENST00000543382 RYR2Q92736 4967 aa9.16□□□□□ -0.94
BECN1-203ENST00000543382 A8MU10 97 aa9.15□□□□□ -0.94
BECN1-203ENST00000543382 SPINK1P00995 79 aa9.15□□□□□ -0.94
BECN1-203ENST00000543382 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
BECN1-203ENST00000543382 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
BECN1-203ENST00000543382 KMT2CQ8NEZ4 4911 aaKnown RBP9.12□□□□□ -0.95
BECN1-203ENST00000543382 PKHD1L1Q86WI1 4243 aa9.12□□□□□ -0.95
BECN1-203ENST00000543382 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
BECN1-203ENST00000543382 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
BECN1-203ENST00000543382 SPAG11AQ6PDA7 123 aa9.11□□□□□ -0.95
BECN1-203ENST00000543382 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
BECN1-203ENST00000543382 LINC00304Q8N9R0 145 aa9.1□□□□□ -0.95
BECN1-203ENST00000543382 KRTAP10-4P60372 401 aaPredicted RBP9.07□□□□□ -0.96
BECN1-203ENST00000543382 SEC61GP60059 68 aa9.07□□□□□ -0.96
BECN1-203ENST00000543382 DMAC1Q96GE9 116 aa9.04□□□□□ -0.96
BECN1-203ENST00000543382 LINC01558Q9Y6Z2 57 aa9.04□□□□□ -0.96
BECN1-203ENST00000543382 IGKV2D-30A0A075B6S6 120 aa9.03□□□□□ -0.96
BECN1-203ENST00000543382 ACYP2P14621 99 aa9.03□□□□□ -0.96
BECN1-203ENST00000543382 RPS29P62273 56 aaKnown RBP9.02□□□□□ -0.97
BECN1-203ENST00000543382 Q75L30 129 aa9.02□□□□□ -0.97
BECN1-203ENST00000543382 SPTSSBQ8NFR3 76 aa9.01□□□□□ -0.97
BECN1-203ENST00000543382 A6NED7 52 aa9□□□□□ -0.97
BECN1-203ENST00000543382 LCA10Q71F78 164 aa8.94□□□□□ -0.98
BECN1-203ENST00000543382 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
BECN1-203ENST00000543382 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.99
BECN1-203ENST00000543382 SPINK7P58062 85 aa8.89□□□□□ -0.99
BECN1-203ENST00000543382 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
BECN1-203ENST00000543382 TNXBP22105 4242 aa8.86□□□□□ -0.99
BECN1-203ENST00000543382 ATP11AUNQ6ZP68 121 aa8.86□□□□□ -0.99
BECN1-203ENST00000543382 HSPG2P98160 4391 aa8.86□□□□□ -0.99
BECN1-203ENST00000543382 FLG2Q5D862 2391 aaPredicted RBP8.85□□□□□ -0.99
BECN1-203ENST00000543382 RYR3Q15413 4870 aa8.85□□□□□ -0.99
BECN1-203ENST00000543382 KTN1-AS1Q86SY8 53 aa8.84□□□□□ -0.99
BECN1-203ENST00000543382 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
BECN1-203ENST00000543382 A8MUU9 505 aa8.83□□□□□ -1
BECN1-203ENST00000543382 C20orf166-AS1Q96NR2 134 aa8.83□□□□□ -1
BECN1-203ENST00000543382 FAT3Q8TDW7 4589 aa8.82□□□□□ -1
BECN1-203ENST00000543382 Q8N1X5 172 aa8.82□□□□□ -1
BECN1-203ENST00000543382 A6NN06 94 aa8.78□□□□□ -1
BECN1-203ENST00000543382 A0A1B0GU69 56 aa8.75□□□□□ -1.01
BECN1-203ENST00000543382 RYR1P21817 5038 aa8.74□□□□□ -1.01
BECN1-203ENST00000543382 RBM12B-AS1Q9P1G2 102 aa8.72□□□□□ -1.01
BECN1-203ENST00000543382 Q5VSD8 79 aa8.71□□□□□ -1.02
BECN1-203ENST00000543382 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
BECN1-203ENST00000543382 KRTAP17-1Q9BYP8 105 aa8.69□□□□□ -1.02
BECN1-203ENST00000543382 KRTAP3-1Q9BYR8 98 aa8.68□□□□□ -1.02
BECN1-203ENST00000543382 MYCBP2O75592 4640 aa8.66□□□□□ -1.02
BECN1-203ENST00000543382 DMBT1Q9UGM3 2413 aaPredicted RBP8.65□□□□□ -1.02
BECN1-203ENST00000543382 KIAA1109Q2LD37 5005 aa8.63□□□□□ -1.03
BECN1-203ENST00000543382 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
BECN1-203ENST00000543382 UQCR11O14957 56 aa8.55□□□□□ -1.04
BECN1-203ENST00000543382 MIR22HGQ0VDD5 57 aa8.53□□□□□ -1.04
BECN1-203ENST00000543382 EPPK1P58107 5090 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms