RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
RTN3-212ENST00000543123 C9orf118A6NHY6 69 aa6.66□□□□□ -1.34
RTN3-212ENST00000543123 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
RTN3-212ENST00000543123 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.34
RTN3-212ENST00000543123 SCGB1C2P0DMR2 95 aa6.65□□□□□ -1.34
RTN3-212ENST00000543123 UBE2V1Q13404 147 aa6.65□□□□□ -1.34
RTN3-212ENST00000543123 IGHV6-1A0A0B4J1U7 121 aa6.64□□□□□ -1.35
RTN3-212ENST00000543123 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
RTN3-212ENST00000543123 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
RTN3-212ENST00000543123 C8orf87E5RJ46 101 aa6.62□□□□□ -1.35
RTN3-212ENST00000543123 DEFB116Q30KQ4 102 aa6.62□□□□□ -1.35
RTN3-212ENST00000543123 A0A1W2PPM0 123 aa6.61□□□□□ -1.35
RTN3-212ENST00000543123 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
RTN3-212ENST00000543123 VPS25Q9BRG1 176 aa6.61□□□□□ -1.35
RTN3-212ENST00000543123 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
RTN3-212ENST00000543123 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
RTN3-212ENST00000543123 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
RTN3-212ENST00000543123 ATXN8Q156A1 80 aa6.6□□□□□ -1.35
RTN3-212ENST00000543123 A0A1B0GVX0 72 aa6.59□□□□□ -1.35
RTN3-212ENST00000543123 J3KT08 172 aa6.59□□□□□ -1.35
RTN3-212ENST00000543123 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
RTN3-212ENST00000543123 GTF2H5Q6ZYL4 71 aa6.58□□□□□ -1.36
RTN3-212ENST00000543123 MTURNQ8N3F0 131 aa6.58□□□□□ -1.36
RTN3-212ENST00000543123 USH2AO75445 5202 aa6.57□□□□□ -1.36
RTN3-212ENST00000543123 MPLKIPQ8TAP9 179 aa6.57□□□□□ -1.36
RTN3-212ENST00000543123 HRES1P13985 223 aa6.56□□□□□ -1.36
RTN3-212ENST00000543123 NAA38Q9BRA0 125 aaKnown RBP6.56□□□□□ -1.36
RTN3-212ENST00000543123 SPCS1Q9Y6A9 102 aa6.56□□□□□ -1.36
RTN3-212ENST00000543123 C9JAW5 83 aa6.55□□□□□ -1.36
RTN3-212ENST00000543123 K7EP34 96 aa6.53□□□□□ -1.36
RTN3-212ENST00000543123 NDUFB1O75438 58 aa6.53□□□□□ -1.36
RTN3-212ENST00000543123 ZCCHC13Q8WW36 166 aaKnown RBP6.53□□□□□ -1.36
RTN3-212ENST00000543123 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
RTN3-212ENST00000543123 MT2AP02795 61 aa6.52□□□□□ -1.37
RTN3-212ENST00000543123 BAALC-AS2P0C853 105 aa6.52□□□□□ -1.37
RTN3-212ENST00000543123 Q6ZQT0 140 aa6.51□□□□□ -1.37
RTN3-212ENST00000543123 A0A1B0GW54 56 aa6.5□□□□□ -1.37
RTN3-212ENST00000543123 H3BT86 120 aa6.5□□□□□ -1.37
RTN3-212ENST00000543123 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
RTN3-212ENST00000543123 SPINK7P58062 85 aa6.48□□□□□ -1.37
RTN3-212ENST00000543123 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
RTN3-212ENST00000543123 PDE6GP18545 87 aa6.47□□□□□ -1.37
RTN3-212ENST00000543123 A8MWP4 228 aa6.46□□□□□ -1.38
RTN3-212ENST00000543123 MT1FP04733 61 aa6.46□□□□□ -1.38
RTN3-212ENST00000543123 Q8N9P0 234 aaPredicted RBP6.46□□□□□ -1.38
RTN3-212ENST00000543123 LOC110117498A0A087WWA1 95 aa6.45□□□□□ -1.38
RTN3-212ENST00000543123 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.45□□□□□ -1.38
RTN3-212ENST00000543123 F8W1H4 67 aa6.45□□□□□ -1.38
RTN3-212ENST00000543123 C8orf17Q9NRJ1 99 aa6.44□□□□□ -1.38
RTN3-212ENST00000543123 A0A1B0GV90 55 aa6.43□□□□□ -1.38
RTN3-212ENST00000543123 KRTAP9-7A8MTY7 169 aa6.42□□□□□ -1.38
RTN3-212ENST00000543123 FCGBPQ9Y6R7 5405 aaPredicted RBP6.42□□□□□ -1.38
RTN3-212ENST00000543123 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
RTN3-212ENST00000543123 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
RTN3-212ENST00000543123 Q6ZVQ6 151 aa6.4□□□□□ -1.38
RTN3-212ENST00000543123 IGKV3D-7A0A0C4DH55 119 aa6.39□□□□□ -1.39
RTN3-212ENST00000543123 H3BS24 57 aa6.38□□□□□ -1.39
RTN3-212ENST00000543123 NREPQ16612 68 aa6.38□□□□□ -1.39
RTN3-212ENST00000543123 KRTAP4-12Q9BQ66 201 aa6.38□□□□□ -1.39
RTN3-212ENST00000543123 C14orf132Q9NPU4 83 aa6.38□□□□□ -1.39
RTN3-212ENST00000543123 PRO0461Q9UI25 63 aa6.38□□□□□ -1.39
RTN3-212ENST00000543123 PRR15Q8IV56 129 aa6.37□□□□□ -1.39
RTN3-212ENST00000543123 LINC00846Q9NV44 126 aa6.37□□□□□ -1.39
RTN3-212ENST00000543123 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
RTN3-212ENST00000543123 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
RTN3-212ENST00000543123 TMEM254Q8TBM7 123 aa6.35□□□□□ -1.39
RTN3-212ENST00000543123 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
RTN3-212ENST00000543123 MMP24-AS1A0A0U1RRL7 71 aa6.31□□□□□ -1.4
RTN3-212ENST00000543123 ETDBQ3ZM63 59 aa6.31□□□□□ -1.4
RTN3-212ENST00000543123 hDV103S1A0JD37 113 aa6.3□□□□□ -1.4
RTN3-212ENST00000543123 NDUFS5O43920 106 aa6.3□□□□□ -1.4
RTN3-212ENST00000543123 J3QR89 54 aa6.29□□□□□ -1.4
RTN3-212ENST00000543123 H1FX-AS1Q4G0G2 97 aa6.28□□□□□ -1.4
RTN3-212ENST00000543123 K7EQZ3 153 aa6.27□□□□□ -1.41
RTN3-212ENST00000543123 BPY2O14599 106 aa6.25□□□□□ -1.41
RTN3-212ENST00000543123 ACYP1P07311 99 aa6.25□□□□□ -1.41
RTN3-212ENST00000543123 C7orf65Q6ZTY9 151 aa6.24□□□□□ -1.41
RTN3-212ENST00000543123 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
RTN3-212ENST00000543123 FAM240AA0A1B0GVK7 77 aa6.23□□□□□ -1.41
RTN3-212ENST00000543123 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
RTN3-212ENST00000543123 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
RTN3-212ENST00000543123 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
RTN3-212ENST00000543123 K7ERU9 68 aa6.2□□□□□ -1.42
RTN3-212ENST00000543123 CASC2Q6XLA1 102 aa6.19□□□□□ -1.42
RTN3-212ENST00000543123 UBL5Q9BZL1 73 aa6.19□□□□□ -1.42
RTN3-212ENST00000543123 CXCL6P80162 114 aa6.16□□□□□ -1.42
RTN3-212ENST00000543123 Q5W150 140 aa6.16□□□□□ -1.42
RTN3-212ENST00000543123 HCG22E2RYF7 251 aa6.15□□□□□ -1.42
RTN3-212ENST00000543123 KRTAP19-4Q3LI73 84 aa6.15□□□□□ -1.42
RTN3-212ENST00000543123 Q8N9L7 120 aa6.14□□□□□ -1.43
RTN3-212ENST00000543123 KRTAP9-9Q9BYP9 154 aa6.14□□□□□ -1.43
RTN3-212ENST00000543123 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
RTN3-212ENST00000543123 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
RTN3-212ENST00000543123 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
RTN3-212ENST00000543123 C4orf26Q17RF5 130 aa6.11□□□□□ -1.43
RTN3-212ENST00000543123 LINC00643Q86TS7 51 aa6.08□□□□□ -1.44
RTN3-212ENST00000543123 FAM236AA0A1B0GUQ0 79 aa6.06□□□□□ -1.44
RTN3-212ENST00000543123 FAM236BA0A1B0GV22 79 aa6.06□□□□□ -1.44
RTN3-212ENST00000543123 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
RTN3-212ENST00000543123 S4R3F8 94 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms